Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_P17
         (928 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M64231-1|AAA60574.1|  302|Homo sapiens spermidine synthase protein.    95   2e-19
M34338-1|AAA36633.1|  302|Homo sapiens spermidine synthase protein.    95   2e-19
BC033106-1|AAH33106.1|  302|Homo sapiens spermidine synthase pro...    95   2e-19
BC000309-1|AAH00309.1|  302|Homo sapiens spermidine synthase pro...    95   2e-19
AL109811-6|CAI22104.1|  302|Homo sapiens spermidine synthase pro...    95   2e-19

>M64231-1|AAA60574.1|  302|Homo sapiens spermidine synthase protein.
          Length = 302

 Score = 95.5 bits (227), Expect = 2e-19
 Identities = 39/81 (48%), Positives = 54/81 (66%)
 Frame = +1

Query: 217 LKTNWFTESCDMWPGGTFSFXVKEVLHTXKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKD 396
           ++  WF E+C +WPG   S  V+++LH  +S+YQ+I VF + + G VLVLDG+IQCT +D
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75

Query: 397 XXSYHEXISXXPLCCHQKSRK 459
             SY E I+  PLC H   RK
Sbjct: 76  EFSYQEMIANLPLCSHPNPRK 96


>M34338-1|AAA36633.1|  302|Homo sapiens spermidine synthase protein.
          Length = 302

 Score = 95.5 bits (227), Expect = 2e-19
 Identities = 39/81 (48%), Positives = 54/81 (66%)
 Frame = +1

Query: 217 LKTNWFTESCDMWPGGTFSFXVKEVLHTXKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKD 396
           ++  WF E+C +WPG   S  V+++LH  +S+YQ+I VF + + G VLVLDG+IQCT +D
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75

Query: 397 XXSYHEXISXXPLCCHQKSRK 459
             SY E I+  PLC H   RK
Sbjct: 76  EFSYQEMIANLPLCSHPNPRK 96


>BC033106-1|AAH33106.1|  302|Homo sapiens spermidine synthase
           protein.
          Length = 302

 Score = 95.5 bits (227), Expect = 2e-19
 Identities = 39/81 (48%), Positives = 54/81 (66%)
 Frame = +1

Query: 217 LKTNWFTESCDMWPGGTFSFXVKEVLHTXKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKD 396
           ++  WF E+C +WPG   S  V+++LH  +S+YQ+I VF + + G VLVLDG+IQCT +D
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75

Query: 397 XXSYHEXISXXPLCCHQKSRK 459
             SY E I+  PLC H   RK
Sbjct: 76  EFSYQEMIANLPLCSHPNPRK 96


>BC000309-1|AAH00309.1|  302|Homo sapiens spermidine synthase
           protein.
          Length = 302

 Score = 95.5 bits (227), Expect = 2e-19
 Identities = 39/81 (48%), Positives = 54/81 (66%)
 Frame = +1

Query: 217 LKTNWFTESCDMWPGGTFSFXVKEVLHTXKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKD 396
           ++  WF E+C +WPG   S  V+++LH  +S+YQ+I VF + + G VLVLDG+IQCT +D
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75

Query: 397 XXSYHEXISXXPLCCHQKSRK 459
             SY E I+  PLC H   RK
Sbjct: 76  EFSYQEMIANLPLCSHPNPRK 96


>AL109811-6|CAI22104.1|  302|Homo sapiens spermidine synthase
           protein.
          Length = 302

 Score = 95.5 bits (227), Expect = 2e-19
 Identities = 39/81 (48%), Positives = 54/81 (66%)
 Frame = +1

Query: 217 LKTNWFTESCDMWPGGTFSFXVKEVLHTXKSKYQNIQVFDTTSLGKVLVLDGIIQCTXKD 396
           ++  WF E+C +WPG   S  V+++LH  +S+YQ+I VF + + G VLVLDG+IQCT +D
Sbjct: 16  IREGWFRETCSLWPGQALSLQVEQLLHHRRSRYQDILVFRSKTYGNVLVLDGVIQCTERD 75

Query: 397 XXSYHEXISXXPLCCHQKSRK 459
             SY E I+  PLC H   RK
Sbjct: 76  EFSYQEMIANLPLCSHPNPRK 96


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,644,983
Number of Sequences: 237096
Number of extensions: 1729328
Number of successful extensions: 2129
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2129
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12103451996
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)