Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_P16
(904 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 31 0.17
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 31 0.22
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 30 0.39
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 0.90
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 29 0.90
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 1.6
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 27 2.8
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 27 4.8
SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr 1|||... 26 6.4
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 26 8.4
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 26 8.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 23 9.5
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 31.5 bits (68), Expect = 0.17
Identities = 16/54 (29%), Positives = 26/54 (48%)
Frame = +3
Query: 177 PTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLS 338
PT ET T + T + +TTT+ + T + T T P + T+ LP++
Sbjct: 102 PTVETTTTPMVETTTITPMVETTTITPMVEAMITLMEETMTTPMEETTTILPMA 155
Score = 29.1 bits (62), Expect = 0.90
Identities = 26/72 (36%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Frame = +3
Query: 153 TPLG*WKTPTQETATNLLTTARTSLILPKTTT----LMETATNLSTTVHITWTVPKADLT 320
TP+ TPT ET T L T A T+ + TTT M T T ++TT + T+ +
Sbjct: 249 TPMEAMITPTVET-TTLPTAAMTTPVEETTTTPMVETMITPTVVTTTTPMVETMITPTVV 307
Query: 321 SSLPL-SLVLAV 353
++ P+ LV+AV
Sbjct: 308 TTTPMVILVMAV 319
Score = 27.1 bits (57), Expect = 3.6
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +3
Query: 174 TPTQETATNLLTTARTSLILPK---TTTLMETATNLSTTVHITWTVPKADLTSSLPL 335
TP +ET T + T+ ILP TT ++ET T TV T T P + T+ P+
Sbjct: 68 TPMEETTT-ITPMVETTTILPMAAMTTPMVETTT--IPTVETT-TTPMVETTTITPM 120
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.1 bits (67), Expect = 0.22
Identities = 18/78 (23%), Positives = 18/78 (23%)
Frame = +3
Query: 525 PPPXXXXXXXXXXXXXXXPXXXPXPXXGGXXXPPXXKXXXXXXXPPPXXXXXPXXXXXXP 704
PPP P P P PP PPP P
Sbjct: 293 PPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP 352
Query: 705 XPPPXXXPPPXPXXXXPP 758
PP PP P P
Sbjct: 353 LPPQGRSAPPPPPPRSAP 370
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = -1
Query: 379 NFLRYSLLPTASTRERGRLEVRSALGTVHVICTVVDRFV 263
NF ++P STR+R + +R G +H+IC D +
Sbjct: 756 NFRVLDIIPFTSTRKRMSVIIRDEDGIIHLICKGADTVI 794
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 0.90
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +3
Query: 657 PPPXXXXXPXXXXXXPXPPPXXXPPPXPXXXXP 755
PPP P P PP PPP P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +2
Query: 656 PPPPXXXXPXXXPXXPXXPPXXXXPPXXPXXP 751
PPPP P P P PP PP P P
Sbjct: 1707 PPPP----PMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 29.1 bits (62), Expect = 0.90
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +3
Query: 192 ATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSL 341
A+ L +++ T+ + P +T ET ++ S+ T T+ + TSS P+SL
Sbjct: 234 ASTLESSSLTNTVSPTESTFYETKSSTSSVP--TQTIDSSSFTSSTPVSL 281
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +2
Query: 239 DYNPNG-NGYEPIDNGAYYVDRPQG---RPYFKPTPFPG 343
DYN N N Y PI N Y+++ G PYF PG
Sbjct: 119 DYNNNRKNFYPPIQNSTYFINATGGIDSMPYFGLNNAPG 157
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/34 (38%), Positives = 13/34 (38%)
Frame = +3
Query: 657 PPPXXXXXPXXXXXXPXPPPXXXPPPXPXXXXPP 758
PPP P P P P PPP P PP
Sbjct: 732 PPPPP---PAVIVPTPAPAPIPVPPPAPIMGGPP 762
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/47 (27%), Positives = 13/47 (27%)
Frame = +3
Query: 525 PPPXXXXXXXXXXXXXXXPXXXPXPXXGGXXXPPXXKXXXXXXXPPP 665
PPP P P P GG PP PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +1
Query: 265 RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 372
R + ++C R P RP + PW + + K I+
Sbjct: 1280 RDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTII 1315
>SPAC22E12.09c |krp1|krp|kexin|Schizosaccharomyces pombe|chr
1|||Manual
Length = 709
Score = 26.2 bits (55), Expect = 6.4
Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Frame = -1
Query: 163 PNGVLSVGHSQQSEDENHEEF-HFYMITSYHQAENIKVVLKILRN 32
P+G+ S+ S++ DEN + F + +T H AE + V K+L N
Sbjct: 520 PSGIRSILASERPYDENSKGFLDWTFMTVQHWAEPPEGVWKLLVN 564
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 25.8 bits (54), Expect = 8.4
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +3
Query: 681 PXXXXXXPXPPPXXXPPPXPXXXXPP 758
P P PPP PP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 25.8 bits (54), Expect = 8.4
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 236 KDYNPNGNGYEPIDNGAYYVDRPQGRP 316
K Y +G G +P + G YY + P+G+P
Sbjct: 479 KIYCVHGVG-KPTERGYYYTNNPEGQP 504
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 22.6 bits (46), Expect(2) = 9.5
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 703 PXPPPPXXPP 732
P PPPP PP
Sbjct: 239 PPPPPPTLPP 248
Score = 21.0 bits (42), Expect(2) = 9.5
Identities = 7/14 (50%), Positives = 7/14 (50%)
Frame = +1
Query: 709 PPPPXXPPXXPXXP 750
PPPP P P P
Sbjct: 273 PPPPATPSQPPRPP 286
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,579,066
Number of Sequences: 5004
Number of extensions: 50575
Number of successful extensions: 239
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 132
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 456499320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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