Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_P13
(874 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0486 - 3455030-3455770 33 0.23
01_06_0732 + 31561149-31561770,31561908-31561999 32 0.69
12_02_0299 - 17051570-17052474,17053542-17053755 30 2.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.1
04_01_0331 - 4372127-4372315,4374213-4374965 29 3.7
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 29 4.9
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 29 4.9
07_03_0329 + 16840051-16840917,16840999-16841342,16841444-168415... 29 4.9
04_03_0904 + 20717005-20718087 29 4.9
08_02_1084 - 24232968-24234779 29 6.4
07_03_1253 + 25201629-25202084,25203264-25203399,25204564-252047... 29 6.4
11_07_0014 + 27379941-27379974,27381975-27382033,27382561-273827... 28 8.5
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 8.5
10_08_0892 - 21347588-21348346 28 8.5
09_02_0267 - 6485428-6485895,6488255-6488303,6488466-6488469,648... 28 8.5
06_03_0874 - 25580417-25580419,25580504-25580604,25580828-255814... 28 8.5
01_01_1008 - 7987936-7988628,7988923-7989102 28 8.5
>06_01_0486 - 3455030-3455770
Length = 246
Score = 33.5 bits (73), Expect = 0.23
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
Frame = +3
Query: 531 HRLRPPDEHHKNXRSSQXWX---NPNXTIKIPGRFPLEXPLVRSPVPTLPAYRNTWSPPF 701
H +PP+ HH + +P T P R P P V SP P +P Y +PP+
Sbjct: 53 HHGKPPEHHHHHKPPPSPRCPSCHPPYTPPTP-RPPPTPPYVPSPPPYVPPYIPPPTPPY 111
Query: 702 SPP 710
PP
Sbjct: 112 VPP 114
>01_06_0732 + 31561149-31561770,31561908-31561999
Length = 237
Score = 31.9 bits (69), Expect = 0.69
Identities = 21/51 (41%), Positives = 24/51 (47%)
Frame = -2
Query: 777 TDGTPEXGXRTGGXV*ERXHGFPEGRKGGTRYSGKRAGXEQESARGGXPGG 625
+ +PE G RT V G P GRKGG G G +ARGG GG
Sbjct: 81 SSSSPELGARTTAPV---VAGHPAGRKGG----GGGGGGRGAAARGGAAGG 124
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/48 (37%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +1
Query: 628 PWXP-PSCALL--FXPCPLTGIPGPPLSPLRETVAPFSYPPXCTXPXF 762
PW P P C F P P P PP P PF PP P F
Sbjct: 213 PWPPIPFCTPRPWFPPIPFLTPPPPPFLPFPLPPIPFLTPPSPPPPAF 260
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +2
Query: 593 PEXDYKDTRAFPPGXPPRALSCSXPARLPEYLVPPFLPS 709
P+ +Y ++ PP PP +C P+ P PP LP+
Sbjct: 576 PQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPN 614
>04_01_0331 - 4372127-4372315,4374213-4374965
Length = 313
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -3
Query: 728 KGATVSRRGERGGPGIPVSGQGXNRR 651
+G TV +GE G P +P+S +G RR
Sbjct: 252 QGETVEEKGEVGVPSLPLSHRGRKRR 277
>10_02_0157 -
5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 29.1 bits (62), Expect = 4.9
Identities = 21/77 (27%), Positives = 23/77 (29%)
Frame = +1
Query: 637 PPSCALLFXPCPLTGIPGPPLSPLRETVAPFSYPPXCTXPXFRCTVRXXXXXXXXXXXTP 816
PPS P P P P +P VAP P T P P
Sbjct: 32 PPSLPTTTPPAPTVVAPPLPTTPPPAVVAPSPPLPPLTPPPAIVPPALPPPPPLPAIVVP 91
Query: 817 PFQPRTAAALXRXPIPP 867
P P T A +PP
Sbjct: 92 PALPPTPAIAVPPALPP 108
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 29.1 bits (62), Expect = 4.9
Identities = 16/39 (41%), Positives = 17/39 (43%)
Frame = +2
Query: 602 DYKDTRAFPPGXPPRALSCSXPARLPEYLVPPFLPSGKP 718
D + P G PP L P LPE PP LPS P
Sbjct: 1118 DQNELPPLPDGPPPLPLDAPPPPPLPE--GPPPLPSDSP 1154
>07_03_0329 +
16840051-16840917,16840999-16841342,16841444-16841574,
16841671-16841792,16841877-16841983,16842104-16842236,
16842342-16842458,16842560-16842667,16842716-16842742,
16842759-16842830,16843462-16843584,16843671-16843833,
16844140-16844264,16844355-16844489,16844574-16844677,
16844772-16844834,16844930-16844993,16845186-16845318,
16845414-16845487,16845603-16845697,16845799-16845830,
16846201-16846355
Length = 1097
Score = 29.1 bits (62), Expect = 4.9
Identities = 19/54 (35%), Positives = 21/54 (38%)
Frame = -2
Query: 786 GRXTDGTPEXGXRTGGXV*ERXHGFPEGRKGGTRYSGKRAGXEQESARGGXPGG 625
GR DG P G R G + +P GR GG G G GG GG
Sbjct: 31 GRGRDGAPYSGGRGRG----QDGSYPGGRGGGYGGGGGGGGPPYYGGGGGGGGG 80
>04_03_0904 + 20717005-20718087
Length = 360
Score = 29.1 bits (62), Expect = 4.9
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +3
Query: 594 PNXTIKIPGRFPLEXPLVRSPVPTLPAYRNTWSPPFSPP 710
P T P P P P PT P Y T +PP+ P
Sbjct: 310 PTPTPYKPQPKPTPSPYTPKPTPTPPTYTPTPTPPYHKP 348
>08_02_1084 - 24232968-24234779
Length = 603
Score = 28.7 bits (61), Expect = 6.4
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = -2
Query: 711 PEGRKGGTRYSGKRAGXEQESARGGXPGGNA 619
P+G +GG + G RGG PGG A
Sbjct: 287 PKGGRGGGGAGSPQVGGNYGGGRGGGPGGGA 317
>07_03_1253 +
25201629-25202084,25203264-25203399,25204564-25204700,
25205439-25206121,25206767-25206911,25207669-25207701
Length = 529
Score = 28.7 bits (61), Expect = 6.4
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -2
Query: 696 GGTRYSGKRAGXEQESARGGXPGGNALVSL*SCSGXATSDLSV 568
GG K++G ++ RGG GG +S +G A DLSV
Sbjct: 39 GGGGGGKKKSGGKKVRPRGGGGGGLRRLSFTDLTGAADQDLSV 81
>11_07_0014 +
27379941-27379974,27381975-27382033,27382561-27382782,
27383727-27383810,27385054-27385131,27385716-27385832,
27385956-27386019,27386399-27386402,27386565-27386613,
27388973-27389440
Length = 392
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3
Query: 710 RRGERGGPGIPVSGQGXNRRAHEGGFQGETPWY 612
RRG G G+P SG G + G PWY
Sbjct: 37 RRGTHGPSGLPSSGDGKGKGV---AITGANPWY 66
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +3
Query: 297 NESAN---ARGEAVCVLGALPLPRSLTRCAR 380
+ESAN AR EAV +G +P+ L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464
>10_08_0892 - 21347588-21348346
Length = 252
Score = 28.3 bits (60), Expect = 8.5
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = -2
Query: 678 GKRAGXEQESARGGXPGGNALVSL*SCSGXATSDL 574
G+RA Q SA G G + L++L +C G A D+
Sbjct: 165 GRRACASQGSAAPGRRGESTLLTLDACCGTAADDV 199
>09_02_0267 -
6485428-6485895,6488255-6488303,6488466-6488469,
6488849-6488912,6489036-6489152,6489737-6489814,
6491058-6491141,6492086-6492307,6492835-6492893,
6494894-6494927
Length = 392
Score = 28.3 bits (60), Expect = 8.5
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = -3
Query: 710 RRGERGGPGIPVSGQGXNRRAHEGGFQGETPWY 612
RRG G G+P SG G + G PWY
Sbjct: 37 RRGTHGPSGLPSSGDGKGKGV---AITGANPWY 66
>06_03_0874 -
25580417-25580419,25580504-25580604,25580828-25581411,
25581523-25581594,25581667-25581793,25583412-25583516,
25583643-25583676
Length = 341
Score = 28.3 bits (60), Expect = 8.5
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = +1
Query: 613 YQGVSPWXPPSCALLFXPCPLTGIPGPPLSPLRETVAPFSYPPXCT 750
Y V P+ + + P P + P PP S L V +YPP T
Sbjct: 180 YPAVPPYQSYPASHVPAPYPTSAYPHPPPSLLARDVEHAAYPPTST 225
>01_01_1008 - 7987936-7988628,7988923-7989102
Length = 290
Score = 28.3 bits (60), Expect = 8.5
Identities = 16/35 (45%), Positives = 21/35 (60%), Gaps = 2/35 (5%)
Frame = -3
Query: 722 ATVSRRGERGGPGIPVSGQ--GXNRRAHEGGFQGE 624
A V RRG RGG G V+G+ +RR G ++GE
Sbjct: 238 ARVRRRGRRGGGG-EVNGEEAARSRRRRRGAWEGE 271
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,918,552
Number of Sequences: 37544
Number of extensions: 472215
Number of successful extensions: 1777
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1552
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1760
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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