Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_P13
         (874 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z54238-1|CAA90992.2|  281|Caenorhabditis elegans Hypothetical pr...    31   1.4  
AF125462-1|AAD12858.2|  244|Caenorhabditis elegans Hypothetical ...    29   3.3  
U14635-1|AAC46657.2|  448|Caenorhabditis elegans Hypothetical pr...    29   4.3  
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr...    28   7.6  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z54238-1|CAA90992.2|  281|Caenorhabditis elegans Hypothetical
           protein T28C6.1 protein.
          Length = 281

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -3

Query: 758 WGXVQXGGYEKGATVSRRGERGGPGIPVSGQGXNRRAHEGGFQGE 624
           WG  Q GG + G      G +GG      G+G N+   +GG+ G+
Sbjct: 170 WGGSQDGGSQGGWGGQNGGGQGGNQGGGGGRGGNQGGEQGGWGGQ 214



 Score = 28.7 bits (61), Expect = 5.7
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = -3

Query: 758 WGXVQXGGY--EKGATVSRRGERGGPGIPVSGQGXNRRAHEGGFQG 627
           WG    GG    +G    R G +GG      GQG ++   +GG QG
Sbjct: 182 WGGQNGGGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQG 227


>AF125462-1|AAD12858.2|  244|Caenorhabditis elegans Hypothetical
           protein Y66H1A.4 protein.
          Length = 244

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 16/38 (42%), Positives = 20/38 (52%)
 Frame = -3

Query: 740 GGYEKGATVSRRGERGGPGIPVSGQGXNRRAHEGGFQG 627
           GG  +G    R G+RGG G    G+G   R   GGF+G
Sbjct: 151 GGRGRGGR-GRGGDRGGRGSDRGGRGGFGRGGGGGFRG 187


>U14635-1|AAC46657.2|  448|Caenorhabditis elegans Hypothetical
           protein C27H5.3 protein.
          Length = 448

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
 Frame = -3

Query: 740 GGYEKGATVSRRGE---RGGPGIPVSGQGXNRRAHEGGFQGETPW 615
           GGY+ G   SR G    RGG G    G+G  R  ++G  +G + W
Sbjct: 101 GGYDGGRGGSRGGYDGGRGGYGGDRGGRGGGRGGYDGERRGGSRW 145


>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
           protein C01G8.9a protein.
          Length = 1724

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +2

Query: 629 PGXPPRALSCSXPARLPEYLVPPFLPSGKP 718
           PG PP+ ++   P + P +  PP  P G P
Sbjct: 496 PGYPPQHMNAFSPGQYPGHQRPPGGPGGPP 525


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 20/80 (25%), Positives = 28/80 (35%)
 Frame = +3

Query: 627 PLEXPLVRSPVPTLPAYRNTWSPPFSPPGNRGXFLIPXXLXXXXXXXXXXXXXQPXAXVX 806
           P   P ++ P+ T P+Y +T  P    P       IP                 P     
Sbjct: 445 PSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPPP---- 500

Query: 807 PNPPLSTPNRCRLXPVXYPP 866
           P PP++TP+     P   PP
Sbjct: 501 PLPPIATPSSVPPPPPPPPP 520


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,137,674
Number of Sequences: 27780
Number of extensions: 346201
Number of successful extensions: 1129
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 945
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1111
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)