Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_P11
(941 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical p... 38 0.008
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 36 0.056
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 36 0.056
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 34 0.17
U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical pr... 33 0.22
Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical pr... 33 0.39
Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical pr... 26 1.2
Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical pr... 31 1.6
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.1
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 29 3.6
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 29 3.6
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 29 3.6
AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein. 29 4.8
AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated... 29 4.8
AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated... 29 4.8
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 6.4
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 6.4
AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical ... 29 6.4
AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical ... 29 6.4
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 28 8.4
U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical pr... 28 8.4
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 8.4
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 8.4
U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein. 28 8.4
AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior phar... 28 8.4
>U50311-12|AAA92315.1| 169|Caenorhabditis elegans Hypothetical
protein C25E10.10 protein.
Length = 169
Score = 38.3 bits (85), Expect = 0.008
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +3
Query: 153 PTRKCP-KGEHSVLYCPQMAEPDC--ENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGK 323
P RK +G+ + C EP C ENPE D V C C C + VR++ TGK
Sbjct: 71 PIRKPECEGDEELKACGSACEPTCDNENPEC-DLV-----CMTNVCQCKKGLVRDSATGK 124
Query: 324 CVPESEC 344
CV +++C
Sbjct: 125 CVEKNKC 131
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 35.5 bits (78), Expect = 0.056
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +1
Query: 481 PXPPPPPPXXXXXXXXXXXXXXXXXXXPXXPPXPPXSXPAXXPXPP 618
P P PPPP P PP PP + P+ P PP
Sbjct: 463 PKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPP 508
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 35.5 bits (78), Expect = 0.056
Identities = 15/46 (32%), Positives = 17/46 (36%)
Frame = +1
Query: 481 PXPPPPPPXXXXXXXXXXXXXXXXXXXPXXPPXPPXSXPAXXPXPP 618
P P PPPP P PP PP + P+ P PP
Sbjct: 470 PKPAPPPPSRIPNPSPSPQPAEVSKSPPPPPPLPPIATPSSVPPPP 515
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +1
Query: 481 PXPPPPPPXXXXXXXXXXXXXXXXXXXPXXPPXPPXSXPAXXPXPP 618
P PPPPP P PP PP S A P PP
Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPP 813
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 33.9 bits (74), Expect = 0.17
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +1
Query: 481 PXPPPPPPXXXXXXXXXXXXXXXXXXXPXXPPXPPXSXPAXXPXPP 618
P PPPPP P PP PP S A P PP
Sbjct: 768 PPPPPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPPPPPP 813
>U42830-3|AAC48275.1| 195|Caenorhabditis elegans Hypothetical
protein C53B7.2 protein.
Length = 195
Score = 33.5 bits (73), Expect = 0.22
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = +3
Query: 195 CPQMAEPDCENPEVHDFVDHVGPCDVPQCFCDRPNVRNTKTGKCVPESEC 344
C QM P CE+P VD C P C C P + + +C+P + C
Sbjct: 38 CTQMCPPTCESPNPQCRVD----CTRPSCTC-LPGHVYSNSRQCIPANSC 82
>Z83227-3|CAB05726.2| 241|Caenorhabditis elegans Hypothetical
protein F45B8.3 protein.
Length = 241
Score = 32.7 bits (71), Expect = 0.39
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +3
Query: 555 PXPXXPPXPAPLXPRXPPXPXPXXXXXXXXXXXXXXXXXXXXXXXXXXPPPP 710
P P PP PAP P PP P P PPPP
Sbjct: 106 PAPCCPPPPAPAAPCCPPPPPPTPSPLVCCKQAPVPENPCCQIVAAAMPPPP 157
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = +1
Query: 481 PXPPPPPPXXXXXXXXXXXXXXXXXXXPXXPPXPPXSXPAXXPXPP 618
P PPPPPP P PP P + P P PP
Sbjct: 88 PLPPPPPP-------ASPCCGPSPVPAPCCPPPPAPAAPCCPPPPP 126
>Z81034-4|CAB02729.1| 541|Caenorhabditis elegans Hypothetical
protein C15C6.3 protein.
Length = 541
Score = 26.2 bits (55), Expect(2) = 1.2
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +1
Query: 562 PXXPPXPPXSXPAXXPXPP 618
P PP PP + P P PP
Sbjct: 477 PPPPPPPPENEPEEFPPPP 495
Score = 23.4 bits (48), Expect(2) = 1.2
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 481 PXPPPPPP 504
P PPPPPP
Sbjct: 476 PPPPPPPP 483
>Z81573-3|CAB04624.3| 398|Caenorhabditis elegans Hypothetical
protein M02G9.2 protein.
Length = 398
Score = 30.7 bits (66), Expect = 1.6
Identities = 25/89 (28%), Positives = 36/89 (40%), Gaps = 1/89 (1%)
Frame = +3
Query: 99 LYLLFVVAAVGYVTGQHFPTR-KCPKGEHSVLYCPQMAEPDCENPEVHDFVDHVGPCDVP 275
L FV+A+V + + C GE C M P+ ++ + P P
Sbjct: 7 LVAFFVIASVQAIPQRTKRQNCDCTPGEAPKCGCQVMPTPEIGGGQM---ICTCSPPVPP 63
Query: 276 QCFCDRPNVRNTKTGKCVPESEC**NCVN 362
+C C NVRN TG +P NCV+
Sbjct: 64 KCVCTEGNVRNIITGPSLPALFKPYNCVS 92
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 2.1
Identities = 16/50 (32%), Positives = 16/50 (32%), Gaps = 4/50 (8%)
Frame = +1
Query: 481 PXPPPPP----PXXXXXXXXXXXXXXXXXXXPXXPPXPPXSXPAXXPXPP 618
P PPPPP P P PP PP P P PP
Sbjct: 29 PCPPPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPP 78
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 552 PPXPXXPPXPAPLXPRXPPXPXP 620
PP PP P P P PP P P
Sbjct: 58 PPPMCPPPPPPPPPPMCPPPPPP 80
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 552 PPXPXXPPXPAPLXPRXPPXPXP 620
PP P PP P P PP P P
Sbjct: 46 PPPPICPPQFCPPPPMCPPPPPP 68
Score = 28.3 bits (60), Expect = 8.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 552 PPXPXXPPXPAPLXPRXPPXPXP 620
PP P PP P P P P P P
Sbjct: 57 PPPPMCPPPPPPPPPPMCPPPPP 79
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 2/46 (4%)
Frame = +1
Query: 487 PPPPPPXXXXXXXXXXXXXXXXXXXP--XXPPXPPXSXPAXXPXPP 618
PPPPPP P PP PP P P PP
Sbjct: 324 PPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPPPPPPPPPPP 369
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/46 (32%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = +1
Query: 481 PXPPPPPPXXXXXXXXXXXXXXXXXXXPXXP-PXPPXSXPAXXPXP 615
P PPPPPP P P P P + PA P P
Sbjct: 24 PQPPPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVPAPAPPP 69
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.5 bits (63), Expect = 3.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 552 PPXPXXPPXPAPLXPRXPPXP 614
PP P PP P P P PP P
Sbjct: 66 PPPPICPPPPPPPMPCPPPPP 86
Score = 29.1 bits (62), Expect = 4.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 552 PPXPXXPPXPAPLXPRXPPXPXP 620
P P PP P P P PP P P
Sbjct: 69 PICPPPPPPPMPCPPPPPPMPRP 91
>AF535160-1|AAN33048.1| 468|Caenorhabditis elegans UNC-34 protein.
Length = 468
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/54 (29%), Positives = 17/54 (31%), Gaps = 3/54 (5%)
Frame = +3
Query: 561 PXXPPXPAPL---XPRXPPXPXPXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPP 713
P PP P PL P+ PP P P PPPPP
Sbjct: 198 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 251
>AC025722-6|AAO12398.1| 310|Caenorhabditis elegans Uncoordinated
protein 34, isoform b protein.
Length = 310
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/54 (29%), Positives = 17/54 (31%), Gaps = 3/54 (5%)
Frame = +3
Query: 561 PXXPPXPAPL---XPRXPPXPXPXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPP 713
P PP P PL P+ PP P P PPPPP
Sbjct: 184 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
>AC025722-5|AAO12397.1| 454|Caenorhabditis elegans Uncoordinated
protein 34, isoform a protein.
Length = 454
Score = 29.1 bits (62), Expect = 4.8
Identities = 16/54 (29%), Positives = 17/54 (31%), Gaps = 3/54 (5%)
Frame = +3
Query: 561 PXXPPXPAPL---XPRXPPXPXPXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPP 713
P PP P PL P+ PP P P PPPPP
Sbjct: 184 PHAPPPPVPLTSNIPQAPPAPPPPIGGIAPVNAHGAPPPPPLPPVGAGAPPPPP 237
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 552 PPXPXXPPXPAPLXPRXPPXP 614
PP P PP P+ P PP P
Sbjct: 261 PPVPPPPPSVTPMPPPMPPTP 281
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 6.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 552 PPXPXXPPXPAPLXPRXPPXP 614
PP P PP P+ P PP P
Sbjct: 271 PPVPPPPPSVTPMPPPMPPTP 291
>AF000193-3|AAB52890.1| 259|Caenorhabditis elegans Hypothetical
protein T20B6.3 protein.
Length = 259
Score = 28.7 bits (61), Expect = 6.4
Identities = 15/46 (32%), Positives = 16/46 (34%)
Frame = -1
Query: 617 GGXGXXAGXEXGGXGGXXGXXXXXXXXXXXXXXXXXXXGGGGGGXG 480
GG G G + GG G G GGGGGG G
Sbjct: 115 GGGGYGGGGDGGGGYGGYGGGGYGGMGGGPGGYGMGGYGGGGGGGG 160
>AC006666-4|AAK21415.1| 109|Caenorhabditis elegans Hypothetical
protein H31G24.1 protein.
Length = 109
Score = 28.7 bits (61), Expect = 6.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +3
Query: 552 PPXPXXPPXPAPLXPRXPPXPXP 620
PP P PP PAP P P P
Sbjct: 85 PPPPPPPPQPAPAQAPAPKYPSP 107
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.3 bits (60), Expect = 8.4
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = -1
Query: 614 GXGXXAGXEXGGXGGXXGXXXXXXXXXXXXXXXXXXXGGGGGGXG 480
G G G GG GG G GGGGGG G
Sbjct: 85 GGGGNGGGGRGGGGGGGGGRGGGGGGRGGGGGGGGGRGGGGGGRG 129
>U27312-9|AAA68252.1| 239|Caenorhabditis elegans Hypothetical
protein F26A1.11 protein.
Length = 239
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +3
Query: 552 PPXPXXPPXPAPLXPRXPPXP 614
PP P P P P P+ PP P
Sbjct: 39 PPSPSRPQRPPPSRPQRPPPP 59
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 562 PXXPPXPPXSXPAXXPXPP 618
P PP PP S P+ P PP
Sbjct: 156 PPPPPPPPVSVPSSKPTPP 174
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 562 PXXPPXPPXSXPAXXPXPP 618
P PP PP S P+ P PP
Sbjct: 156 PPPPPPPPVSVPSSKPTPP 174
>U07628-1|AAA17738.1| 515|Caenorhabditis elegans APX-1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 8.4
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +3
Query: 180 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC-** 350
H V C + DC NP + G C P QC C T+ +C+P + C
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216
Query: 351 NCVN 362
+CVN
Sbjct: 217 DCVN 220
>AF101319-2|AAC69353.4| 515|Caenorhabditis elegans Anterior pharynx
in excess protein1 protein.
Length = 515
Score = 28.3 bits (60), Expect = 8.4
Identities = 20/64 (31%), Positives = 27/64 (42%), Gaps = 3/64 (4%)
Frame = +3
Query: 180 HSVLYCPQ-MAEPDCENPEVHDFVDHVGPCDVP-QCFCDRPNVRNTKTGKCVPESEC-** 350
H V C + DC NP + G C P QC C T+ +C+P + C
Sbjct: 158 HGVRRCSAGWSGEDCSNPICAGGCSNRGRCVAPNQCSC-ADGFNGTRCEQCLPRAGCVNG 216
Query: 351 NCVN 362
+CVN
Sbjct: 217 DCVN 220
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,315,989
Number of Sequences: 27780
Number of extensions: 311416
Number of successful extensions: 3494
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1129
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2659
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2433684176
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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