Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_P11
         (941 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.8  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    23   3.0  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    23   3.0  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   3.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.0  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    23   3.0  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 481  PXPPPPPP 504
            P PPPPPP
Sbjct: 1355 PPPPPPPP 1362



 Score = 20.6 bits (41), Expect(2) = 2.8
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 849  PXPPPPP 869
            P PPPPP
Sbjct: 1355 PPPPPPP 1361



 Score = 20.6 bits (41), Expect(2) = 2.8
 Identities = 6/7 (85%), Positives = 6/7 (85%)
 Frame = +3

Query: 855  PPPPPXP 875
            PPPPP P
Sbjct: 1356 PPPPPPP 1362


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -1

Query: 347 LTFRFRYTFASFRVPDIRPVAEALWYVAWAHVVNEIVDFGILTV-RLGHLRAIQ 189
           L F   Y    F  PD  P    ++++ W   VN  ++  I T+  L + RA +
Sbjct: 341 LPFFLMYVIVPF-CPDCCPSDRMVYFITWLGYVNSALNPLIYTIFNLDYRRAFR 393


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -1

Query: 347 LTFRFRYTFASFRVPDIRPVAEALWYVAWAHVVNEIVDFGILTV-RLGHLRAIQ 189
           L F   Y    F  PD  P    ++++ W   VN  ++  I T+  L + RA +
Sbjct: 341 LPFFLMYVIVPF-CPDCCPSDRMVYFITWLGYVNSALNPLIYTIFNLDYRRAFR 393


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 481 PXPPPPPP 504
           P PPPPPP
Sbjct: 341 PAPPPPPP 348


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 481  PXPPPPPP 504
            P PPPPPP
Sbjct: 1857 PEPPPPPP 1864


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
 Frame = -1

Query: 347 LTFRFRYTFASFRVPDIRPVAEALWYVAWAHVVNEIVDFGILTV-RLGHLRAIQ 189
           L F   Y    F  PD  P    ++++ W   VN  ++  I T+  L + RA +
Sbjct: 341 LPFFLMYVIVPF-CPDCCPSDRMVYFITWLGYVNSALNPLIYTIFNLDYRRAFR 393


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,725
Number of Sequences: 438
Number of extensions: 4410
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 19
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30839445
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)