Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_P09
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 34 0.16
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 34 0.16
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 34 0.16
Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical pr... 33 0.36
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 31 1.5
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 30 2.6
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 30 2.6
AL032655-7|CAH60798.1| 329|Caenorhabditis elegans Hypothetical ... 29 4.5
U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family... 29 5.9
U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical p... 29 5.9
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 28 7.8
AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical ... 28 7.8
AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical ... 28 7.8
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 33.9 bits (74), Expect = 0.16
Identities = 29/92 (31%), Positives = 35/92 (38%), Gaps = 3/92 (3%)
Frame = +2
Query: 614 PGVSPWKPPSCASPVPTLPLTGIPVRPSSPSGNXAXSHXPXPVXISLP---GVRSLRXQA 784
P SP PP+ SP P P G P P P G+ P P P G S
Sbjct: 276 PTGSPPPPPAGGSPPP--PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGS-PPPP 332
Query: 785 XACVAQPPXFNPRTAAPLSGTXXP*VPPRXNP 880
Q P +P T +P +G+ PPR P
Sbjct: 333 PRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP 364
Score = 31.9 bits (69), Expect = 0.63
Identities = 29/85 (34%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Frame = +2
Query: 623 SPWKPPSCASPVPTLPLTGIPVRP--SSPSGNXAXSHXPXPVXISLPGVRSLRXQAXACV 796
SP PP+ SP P P TG P P SP A P P S P R
Sbjct: 254 SPPPPPAAGSPPP--PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS 311
Query: 797 AQPPXFNPRTAAPLSGTXXP*VPPR 871
PP + P +GT P PPR
Sbjct: 312 LPPP--QAGGSPPPAGTGSPPPPPR 334
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 33.9 bits (74), Expect = 0.16
Identities = 29/92 (31%), Positives = 35/92 (38%), Gaps = 3/92 (3%)
Frame = +2
Query: 614 PGVSPWKPPSCASPVPTLPLTGIPVRPSSPSGNXAXSHXPXPVXISLP---GVRSLRXQA 784
P SP PP+ SP P P G P P P G+ P P P G S
Sbjct: 297 PTGSPPPPPAGGSPPP--PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGS-PPPP 353
Query: 785 XACVAQPPXFNPRTAAPLSGTXXP*VPPRXNP 880
Q P +P T +P +G+ PPR P
Sbjct: 354 PRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP 385
Score = 31.9 bits (69), Expect = 0.63
Identities = 29/85 (34%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Frame = +2
Query: 623 SPWKPPSCASPVPTLPLTGIPVRP--SSPSGNXAXSHXPXPVXISLPGVRSLRXQAXACV 796
SP PP+ SP P P TG P P SP A P P S P R
Sbjct: 275 SPPPPPAAGSPPP--PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS 332
Query: 797 AQPPXFNPRTAAPLSGTXXP*VPPR 871
PP + P +GT P PPR
Sbjct: 333 LPPP--QAGGSPPPAGTGSPPPPPR 355
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 33.9 bits (74), Expect = 0.16
Identities = 29/92 (31%), Positives = 35/92 (38%), Gaps = 3/92 (3%)
Frame = +2
Query: 614 PGVSPWKPPSCASPVPTLPLTGIPVRPSSPSGNXAXSHXPXPVXISLP---GVRSLRXQA 784
P SP PP+ SP P P G P P P G+ P P P G S
Sbjct: 282 PTGSPPPPPAGGSPPP--PRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAGTGS-PPPP 338
Query: 785 XACVAQPPXFNPRTAAPLSGTXXP*VPPRXNP 880
Q P +P T +P +G+ PPR P
Sbjct: 339 PRQKRQAPERSPPTGSPPTGSPPTGRPPRGGP 370
Score = 31.9 bits (69), Expect = 0.63
Identities = 29/85 (34%), Positives = 32/85 (37%), Gaps = 2/85 (2%)
Frame = +2
Query: 623 SPWKPPSCASPVPTLPLTGIPVRP--SSPSGNXAXSHXPXPVXISLPGVRSLRXQAXACV 796
SP PP+ SP P P TG P P SP A P P S P R
Sbjct: 260 SPPPPPAAGSPPP--PRTGSPPPPPTGSPPPPPAGGSPPPPRAGSPPPPPPPRGSPPTGS 317
Query: 797 AQPPXFNPRTAAPLSGTXXP*VPPR 871
PP + P +GT P PPR
Sbjct: 318 LPPP--QAGGSPPPAGTGSPPPPPR 340
>Z68753-3|CAA92988.3| 984|Caenorhabditis elegans Hypothetical
protein ZC518.2 protein.
Length = 984
Score = 32.7 bits (71), Expect = 0.36
Identities = 26/86 (30%), Positives = 36/86 (41%), Gaps = 4/86 (4%)
Frame = +2
Query: 635 PPSCAS---PVPTLPLTGIPVRPSSPSGNXAXSHXPXPVXISLPGVRSLRXQAXACVA-Q 802
PP+ A+ P PT + PV+P S N A S+ + P S A + Q
Sbjct: 46 PPNYAANPFPFPTATTSQEPVKPVSQIPNGAPSYQYNHAAPNYPTAASAFPAHSAGFSHQ 105
Query: 803 PPXFNPRTAAPLSGTXXP*VPPRXNP 880
PP F+P T ++G P P P
Sbjct: 106 PPSFSPATQPSMNGHHAPPPPAVSRP 131
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.7 bits (66), Expect = 1.5
Identities = 26/115 (22%), Positives = 37/115 (32%)
Frame = +2
Query: 542 PPERASQKSTLKSEVAKPDRTIXIPGVSPWKPPSCASPVPTLPLTGIPVRPSSPSGNXAX 721
PP + + + A+P +T P +P+ P A P P P P
Sbjct: 28 PPPPPPKPAPYVEQSAQPQQTAPPPPPAPY--PQQAVPAPAPPPAPYPQHAVPAPAPPLA 85
Query: 722 SHXPXPVXISLPGVRSLRXQAXACVAQPPXFNPRTAAPLSGTXXP*VPPRXNPTY 886
S+ V + P A A PP P+ A P PP P +
Sbjct: 86 SYPQNAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAPAPYQQQPPPPPPPPH 140
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 554 ASQKST-LKSEVAKPDRTIXIPGVSPWKPPSCASPVPTLPLTGIPVRPSSPSGNXAXSHX 730
+S KST ++ E + + + P SP PP P LPL+ P +P+ P +
Sbjct: 48 SSSKSTVIEVEQSSRQQQVGRPTESPPLPP------PPLPLSNPPAKPTPPPPPPKPTIR 101
Query: 731 PXPVXISLP 757
P P+ S P
Sbjct: 102 PPPIPASPP 110
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +2
Query: 539 RPPERASQKSTLKSEVAKPDRTIXIPGVSPWKPPSCASPVP 661
RPP L SE + VSP KPPS A PVP
Sbjct: 112 RPPASEPVGIPLYSEKQHQQQLRPTTAVSPPKPPSFAPPVP 152
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 29.9 bits (64), Expect = 2.6
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 554 ASQKST-LKSEVAKPDRTIXIPGVSPWKPPSCASPVPTLPLTGIPVRPSSPSGNXAXSHX 730
+S KST ++ E + + + P SP PP P LPL+ P +P+ P +
Sbjct: 270 SSSKSTVIEVEQSSRQQQVGRPTESPPLPP------PPLPLSNPPAKPTPPPPPPKPTIR 323
Query: 731 PXPVXISLP 757
P P+ S P
Sbjct: 324 PPPIPASPP 332
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +2
Query: 539 RPPERASQKSTLKSEVAKPDRTIXIPGVSPWKPPSCASPVP 661
RPP L SE + VSP KPPS A PVP
Sbjct: 334 RPPASEPVGIPLYSEKQHQQQLRPTTAVSPPKPPSFAPPVP 374
>AL032655-7|CAH60798.1| 329|Caenorhabditis elegans Hypothetical
protein Y6B3B.12 protein.
Length = 329
Score = 29.1 bits (62), Expect = 4.5
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Frame = +2
Query: 641 SCASPVPTLPLTGI---PVRPSSPSGNXAXSHXPXPVXISLPGVRSLRXQAXACVA 799
S +SP P LP++ I V+ +SP N A P P +L R A A VA
Sbjct: 106 SMSSPNPALPISSIIAEAVKNASPPTNKAAEPFPTPSSSNLTYARITAAAAVAAVA 161
>U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family
protein 5, isoformb protein.
Length = 1306
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/63 (30%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +2
Query: 653 PVPTLPLTGIPVRPSSPSGNXAXSHXPXPVXI-SLPGVRSLRXQAXACVAQPPXFNPRTA 829
P P + TG PV P P + P P + SLP + Q PP P+
Sbjct: 497 PAPQVEQTGAPVEPEFPQFPTFPTLSPHPQELPSLPTTKMAPPQPVP-TQSPPLPTPKRL 555
Query: 830 APL 838
AP+
Sbjct: 556 APV 558
>U23515-13|AAK21453.1| 823|Caenorhabditis elegans Hypothetical
protein R144.2a protein.
Length = 823
Score = 28.7 bits (61), Expect = 5.9
Identities = 19/65 (29%), Positives = 31/65 (47%)
Frame = +3
Query: 483 SKRPGTVKRPRCWRFSIXSAPLNEHHKNXRSSQRWRNPTGLXRYQAFPPGSLPRAPLLFX 662
+K PGTV + + + PL++ + +S+ +P GL R A P P AP+
Sbjct: 204 TKSPGTVNKEKQVKKEPKQDPLDKLLPSSSASKTSSSPAGLKRKSA--PSEHPNAPIRKK 261
Query: 663 PCRLP 677
P + P
Sbjct: 262 PQQPP 266
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 1/68 (1%)
Frame = +2
Query: 542 PPERASQKSTLKSEVAKPDRTIXIPGVSPWKPPSCASPVPTLP-LTGIPVRPSSPSGNXA 718
P A + S P T P P PPS A+ PT P LT +PV + SG +
Sbjct: 2223 PVSSAPTSGAVSSTTNTPSPTNQSPVTLP--PPSVATAGPTGPILTVVPVSSAPTSGAVS 2280
Query: 719 XSHXPXPV 742
+ PV
Sbjct: 2281 STATAAPV 2288
>AL132898-6|CAC14409.1| 187|Caenorhabditis elegans Hypothetical
protein Y59A8B.9 protein.
Length = 187
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/87 (25%), Positives = 33/87 (37%)
Frame = +2
Query: 566 STLKSEVAKPDRTIXIPGVSPWKPPSCASPVPTLPLTGIPVRPSSPSGNXAXSHXPXPVX 745
++ K+ P R++ V+ + P+ P P P R S+ A + P
Sbjct: 19 ASAKTPSRMPARSVPQKPVTTMRTPAATPAAP--PTRPTPSRSSAAPRATAPTPTAAPPK 76
Query: 746 ISLPGVRSLRXQAXACVAQPPXFNPRT 826
P VRS A A A PP + T
Sbjct: 77 TCAPPVRSASTVAAAAAAAPPGVDMAT 103
>AL132898-5|CAC14408.1| 316|Caenorhabditis elegans Hypothetical
protein Y59A8B.7 protein.
Length = 316
Score = 28.3 bits (60), Expect = 7.8
Identities = 22/87 (25%), Positives = 33/87 (37%)
Frame = +2
Query: 566 STLKSEVAKPDRTIXIPGVSPWKPPSCASPVPTLPLTGIPVRPSSPSGNXAXSHXPXPVX 745
++ K+ P R++ V+ + P+ P P P R S+ A + P
Sbjct: 148 ASAKTPSRMPARSVPQKPVTTMRTPAATPAAP--PTRPTPSRSSAAPRATAPTPTAAPPK 205
Query: 746 ISLPGVRSLRXQAXACVAQPPXFNPRT 826
P VRS A A A PP + T
Sbjct: 206 TCAPPVRSASTVAAAAAAAPPGVDMAT 232
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,741,090
Number of Sequences: 27780
Number of extensions: 334991
Number of successful extensions: 1082
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 970
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1059
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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