Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_P09
         (891 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       25   0.93 
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    25   1.2  
AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex det...    22   6.5  
AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex det...    22   6.5  
AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex det...    22   6.5  
AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex det...    22   6.5  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             22   8.6  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 25.0 bits (52), Expect = 0.93
 Identities = 10/27 (37%), Positives = 17/27 (62%), Gaps = 4/27 (14%)
 Frame = +2

Query: 635 PPSCASPVPTLP----LTGIPVRPSSP 703
           PPS  +P+P +P    ++G+P  P+ P
Sbjct: 410 PPSAGAPMPPIPNMSNMSGMPPLPNMP 436


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -1

Query: 681 IPVSGRVGTGEAHEGGFQ 628
           +P SG V +G+ H GG+Q
Sbjct: 918 VPGSGIVASGQQHAGGWQ 935


>AY569703-1|AAS86656.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 803 PPXFNPRTAAPLSGTXXP*VPPRXNPTY 886
           PP   PR   P +    P + PR  PTY
Sbjct: 368 PPTPFPRFIPPNAYRFRPPLNPRFGPTY 395


>AY569701-1|AAS86654.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 803 PPXFNPRTAAPLSGTXXP*VPPRXNPTY 886
           PP   PR   P +    P + PR  PTY
Sbjct: 379 PPTPFPRFIPPNAYRFRPPLNPRFGPTY 406


>AY569700-1|AAS86653.1|  407|Apis mellifera complementary sex
           determiner protein.
          Length = 407

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 803 PPXFNPRTAAPLSGTXXP*VPPRXNPTY 886
           PP   PR   P +    P + PR  PTY
Sbjct: 379 PPTPFPRFIPPNAYRFRPPLNPRFGPTY 406


>AY569699-1|AAS86652.1|  396|Apis mellifera complementary sex
           determiner protein.
          Length = 396

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/28 (39%), Positives = 13/28 (46%)
 Frame = +2

Query: 803 PPXFNPRTAAPLSGTXXP*VPPRXNPTY 886
           PP   PR   P +    P + PR  PTY
Sbjct: 368 PPTPFPRFIPPNAYRFRPPLNPRFGPTY 395


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
 Frame = +2

Query: 545  PERASQKSTLKSEVAKPDRTIX-IPGVSPWKPPSCASPVPTLPLT 676
            P  A  K  LK +  KP  +   IPG +  K PS    +P LP T
Sbjct: 1117 PGTADNKPQLKPQ--KPFTSPGGIPGPNGIKMPSFMEGMPHLPFT 1159


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,048
Number of Sequences: 438
Number of extensions: 4637
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 28783482
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)