Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_P08
         (877 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical pr...   104   1e-22
Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical pr...   101   9e-22
AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical ...    31   0.82 
U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z78413-7|CAB01657.1|  352|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z83128-1|CAB05635.1|   92|Caenorhabditis elegans Hypothetical
           protein W01D2.1 protein.
          Length = 92

 Score =  104 bits (249), Expect = 1e-22
 Identities = 42/69 (60%), Positives = 53/69 (76%)
 Frame = +1

Query: 115 MTKGTSSFGKRRNKTHTLCRXCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTTG 294
           MTKGT +FGK+  K+HTLC+ CG+SS+HIQK +CA CGYP AK R+Y+W  K+ RR+TTG
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYPDAKKRTYNWGAKSIRRRTTG 60

Query: 295 TGRMLSFED 321
           TGR     D
Sbjct: 61  TGRTRHLRD 69



 Score = 30.7 bits (66), Expect = 1.4
 Identities = 12/22 (54%), Positives = 15/22 (68%)
 Frame = +2

Query: 311 HLKIVRRRFRNGFKEGKPTPPK 376
           HL+ V  RFRNGF+EG    P+
Sbjct: 66  HLRDVNARFRNGFREGTTPKPR 87


>Z77131-1|CAB00854.1|   91|Caenorhabditis elegans Hypothetical
           protein C54C6.1 protein.
          Length = 91

 Score =  101 bits (241), Expect = 9e-22
 Identities = 41/69 (59%), Positives = 52/69 (75%)
 Frame = +1

Query: 115 MTKGTSSFGKRRNKTHTLCRXCGRSSYHIQKSKCAQCGYPAAKLRSYHWSVKAKRRKTTG 294
           MTKGT +FGK+  K+HTLC+ CG+SS+HIQK +CA CGY  AK R+Y+W  K+ RR+TTG
Sbjct: 1   MTKGTQAFGKKHVKSHTLCKRCGKSSFHIQKKRCASCGYQDAKKRTYNWGAKSIRRRTTG 60

Query: 295 TGRMLSFED 321
           TGR     D
Sbjct: 61  TGRTRHLRD 69


>AF098986-5|AAC67426.1|  671|Caenorhabditis elegans Hypothetical
           protein C36C9.4 protein.
          Length = 671

 Score = 31.5 bits (68), Expect = 0.82
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
 Frame = +1

Query: 37  PLRFXLASLFVSNFXYISFGLSRVTM---MTKGTSS---FGKRRNKTHTLCRXCGRSSYH 198
           P    +AS  VS +  ++F  S +++   + +  +S   + K    TH  C  CG+ + +
Sbjct: 55  PALLHVASACVSRYSNLAFKRSLLSLDESVAESANSIWTYNKNNFSTHHFCNKCGKVAQN 114

Query: 199 IQKSKCAQCGYPAA 240
               KC  CG P A
Sbjct: 115 --SKKCKHCGGPVA 126


>U41275-2|AAA82465.1|  438|Caenorhabditis elegans Hypothetical
           protein T25D1.2 protein.
          Length = 438

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/74 (27%), Positives = 34/74 (45%), Gaps = 6/74 (8%)
 Frame = +1

Query: 37  PLRFXLASLFVSNFXYISFGLSRVTM---MTKGTSS---FGKRRNKTHTLCRXCGRSSYH 198
           P    +AS  VS +  ++F  S +++   + +  +S   + K    TH  C  CG+ + +
Sbjct: 127 PALLHVASACVSRYSNLAFKRSLLSLDESVAESANSIWTYNKNNFSTHHFCNKCGKVAQN 186

Query: 199 IQKSKCAQCGYPAA 240
               KC  CG P A
Sbjct: 187 --SKKCKYCGGPVA 198


>Z78413-7|CAB01657.1|  352|Caenorhabditis elegans Hypothetical
           protein T01C3.7 protein.
          Length = 352

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 15/38 (39%), Positives = 17/38 (44%)
 Frame = -1

Query: 805 GGREPGXRESVGGRXXXGGPNTXTGFXRGGXGFXKGXK 692
           GGR  G R   GGR    G     G  RGG G  +G +
Sbjct: 68  GGRGGGDRGGFGGRGSPRGGFGGRGSPRGGRGSPRGGR 105


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,019,252
Number of Sequences: 27780
Number of extensions: 222502
Number of successful extensions: 506
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)