Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_P07
(871 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical pr... 32 0.61
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 4.3
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 4.3
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 4.3
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.3
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 4.3
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.3
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.3
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.3
Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical pr... 29 5.7
Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical pr... 29 5.7
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 23 6.6
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 28 7.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 28 7.5
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 28 7.5
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 28 10.0
U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical pr... 28 10.0
U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical pr... 28 10.0
AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical... 28 10.0
>Z54238-1|CAA90992.2| 281|Caenorhabditis elegans Hypothetical
protein T28C6.1 protein.
Length = 281
Score = 31.9 bits (69), Expect = 0.61
Identities = 22/76 (28%), Positives = 27/76 (35%), Gaps = 1/76 (1%)
Frame = -2
Query: 771 WGGEXXLGXG-EKGGAX*RRXGSPNFRXXXDFXXGVXGGGLXXLXXXXYHVGXQVXLXKG 595
WGG+ G G +GG R + G GG + G Q +G
Sbjct: 182 WGGQNGGGQGGNQGGGGGRGGNQGGEQGGWGGQGGSQGGSQGGSQGGWGNQGGQQGGGRG 241
Query: 594 GSXAPXPXXGGGXGGG 547
G P GGG GGG
Sbjct: 242 GQQGPGGWGGGGRGGG 257
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 29.9 bits (64), Expect = 2.5
Identities = 10/24 (41%), Positives = 12/24 (50%)
Frame = +2
Query: 545 PPPPXPPPXXGXGAXDPPLXRXTW 616
P PP PP G G +PP+ W
Sbjct: 435 PAPPPPPACDGQGCVNPPVVSGVW 458
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 545 PPPPXPPPXXGXGAXDPPLXRXTWXP 622
PPPP PPP PP R T P
Sbjct: 505 PPPPPPPPALEQEISGPPTVRLTAVP 530
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 545 PPPPXPPPXXGXGAXDPPLXRXTWXPT*YXXXXXLXNPPPKTP 673
PPPP PPP G PP + P L PP K P
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYL--PPKKVP 810
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 545 PPPPXPPPXXGXGAXDPP 598
PPPP PPP G PP
Sbjct: 769 PPPPPPPPPGGFKGGPPP 786
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 545 PPPPXPPPXXGXGAXDPPLXRXTWXPT*YXXXXXLXNPPPKTP 673
PPPP PPP G PP + P L PP K P
Sbjct: 770 PPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYL--PPKKVP 810
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 545 PPPPXPPPXXGXGAXDPP 598
PPPP PPP G PP
Sbjct: 769 PPPPPPPPPGGFKGGPPP 786
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 4.3
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 545 PPPPXPPPXXGXGAXDPPLXRXTWXP 622
PPPP PPP PP R T P
Sbjct: 516 PPPPPPPPALEQEISGPPTVRLTAVP 541
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.1 bits (62), Expect = 4.3
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +2
Query: 545 PPPPXPPPXXGXGAXDPPLXRXTWXPT*YXXXXXLXNPPPKTP 673
PPPP PPP G PP + P L PP K P
Sbjct: 353 PPPPPPPPGGFKGGPPPPPPPGMFAPMAPVIPDYL--PPKKVP 393
Score = 28.7 bits (61), Expect = 5.7
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 545 PPPPXPPPXXGXGAXDPP 598
PPPP PPP G PP
Sbjct: 352 PPPPPPPPPGGFKGGPPP 369
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/78 (30%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Frame = +2
Query: 545 PPPPXP---PPXXGXGAXDPPLXRXTWXPT*YXXXXXLXNPPPKTPXXKSXXWRKFGDPX 715
PPPP P PP G G+ PP + P +PPP P G P
Sbjct: 238 PPPPPPKGSPPLAGSGSPPPPPAAGSPPP------PRTGSPPP-PPTGSPPPPPAGGSPP 290
Query: 716 RLYXAPPFSPXPKXXSPP 769
P P P SPP
Sbjct: 291 PPRAGSPPPPPPPRGSPP 308
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/78 (30%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Frame = +2
Query: 545 PPPPXP---PPXXGXGAXDPPLXRXTWXPT*YXXXXXLXNPPPKTPXXKSXXWRKFGDPX 715
PPPP P PP G G+ PP + P +PPP P G P
Sbjct: 259 PPPPPPKGSPPLAGSGSPPPPPAAGSPPP------PRTGSPPP-PPTGSPPPPPAGGSPP 311
Query: 716 RLYXAPPFSPXPKXXSPP 769
P P P SPP
Sbjct: 312 PPRAGSPPPPPPPRGSPP 329
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.3
Identities = 24/78 (30%), Positives = 27/78 (34%), Gaps = 3/78 (3%)
Frame = +2
Query: 545 PPPPXP---PPXXGXGAXDPPLXRXTWXPT*YXXXXXLXNPPPKTPXXKSXXWRKFGDPX 715
PPPP P PP G G+ PP + P +PPP P G P
Sbjct: 244 PPPPPPKGSPPLAGSGSPPPPPAAGSPPP------PRTGSPPP-PPTGSPPPPPAGGSPP 296
Query: 716 RLYXAPPFSPXPKXXSPP 769
P P P SPP
Sbjct: 297 PPRAGSPPPPPPPRGSPP 314
>Z99276-1|CAB16481.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +2
Query: 659 PPKTPXXKSXXWRKFGDPXRL---YXAPPFSPXPKXXSPPHXFASXXXVXRXPGARXRPA 829
PPK P K ++ P R+ APPF P + PP F S R G R R A
Sbjct: 463 PPKQPRQKR--YQMGIPPNRMGYSSDAPPFIPSHQQQPPPQFFNSQHLPQRFRGGRQRGA 520
>Z73428-6|CAA97810.2| 1014|Caenorhabditis elegans Hypothetical
protein M142.6 protein.
Length = 1014
Score = 28.7 bits (61), Expect = 5.7
Identities = 21/60 (35%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
Frame = +2
Query: 659 PPKTPXXKSXXWRKFGDPXRL---YXAPPFSPXPKXXSPPHXFASXXXVXRXPGARXRPA 829
PPK P K ++ P R+ APPF P + PP F S R G R R A
Sbjct: 463 PPKQPRQKR--YQMGIPPNRMGYSSDAPPFIPSHQQQPPPQFFNSQHLPQRFRGGRQRGA 520
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 23.4 bits (48), Expect(2) = 6.6
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 545 PPPPXPPP 568
PPPP PPP
Sbjct: 26 PPPPPPPP 33
Score = 23.4 bits (48), Expect(2) = 6.6
Identities = 10/37 (27%), Positives = 15/37 (40%)
Frame = +2
Query: 656 PPPKTPXXKSXXWRKFGDPXRLYXAPPFSPXPKXXSP 766
PPP P + + P + PP +P P+ P
Sbjct: 27 PPPPPPPKPAPYVEQSAQPQQTAPPPPPAPYPQQAVP 63
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 28.3 bits (60), Expect = 7.5
Identities = 22/75 (29%), Positives = 27/75 (36%)
Frame = +2
Query: 545 PPPPXPPPXXGXGAXDPPLXRXTWXPT*YXXXXXLXNPPPKTPXXKSXXWRKFGDPXRLY 724
PPPP PP G PP P PPP++P + R
Sbjct: 122 PPPPPPPRKSRAGGSSPPPPPPPRVP---------RTPPPRSPPPRRPPMTPPSPQRRPP 172
Query: 725 XAPPFSPXPKXXSPP 769
PP SP P+ +PP
Sbjct: 173 RTPP-SPEPR--NPP 184
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 28.3 bits (60), Expect = 7.5
Identities = 15/43 (34%), Positives = 16/43 (37%)
Frame = +2
Query: 545 PPPPXPPPXXGXGAXDPPLXRXTWXPT*YXXXXXLXNPPPKTP 673
PPPP PPP PL P + L PPP P
Sbjct: 1356 PPPPPPPPTMSKAPTGVPLPVPP-PPPLFSPSMILPPPPPPLP 1397
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 545 PPPPXPPPXXGXGAXDPP 598
PPPP PPP G PP
Sbjct: 577 PPPPPPPPMLGGPPPPPP 594
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +2
Query: 545 PPPPXPPPXXGXGAXDPP 598
PPPP PPP G PP
Sbjct: 39 PPPPPPPPCGGGYEAPPP 56
>U58753-8|AAC24439.1| 633|Caenorhabditis elegans Hypothetical
protein W03B1.9 protein.
Length = 633
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 544 PPPPXPPPXXRXRGXGSP 597
PPPP PPP R R P
Sbjct: 446 PPPPPPPPRRRSRSRDRP 463
>U58753-7|AAC24433.1| 581|Caenorhabditis elegans Hypothetical
protein W03B1.5 protein.
Length = 581
Score = 27.9 bits (59), Expect = 10.0
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 544 PPPPXPPPXXRXRGXGSP 597
PPPP PPP R R P
Sbjct: 394 PPPPPPPPRRRSRSRDRP 411
>AF003141-13|AAK21490.1| 549|Caenorhabditis elegans Hypothetical
protein W02D3.11a protein.
Length = 549
Score = 27.9 bits (59), Expect = 10.0
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = -2
Query: 600 KGGSXAPXPXXGGGXGGGG 544
+GGS P P GGG GGGG
Sbjct: 364 RGGSGGP-PSIGGGVGGGG 381
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,606,791
Number of Sequences: 27780
Number of extensions: 363463
Number of successful extensions: 2676
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1608
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2181923744
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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