Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_P04
         (872 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071724-1|AAL49346.1|  121|Drosophila melanogaster RH40291p pro...    32   1.2  
AE014297-3068|AAF55934.1|  121|Drosophila melanogaster CG17820-P...    32   1.2  
AE013599-3504|AAF46928.2| 1711|Drosophila melanogaster CG3820-PA...    32   1.2  
AY094967-1|AAM11320.1| 1711|Drosophila melanogaster SD07675p pro...    31   1.6  
BT029915-1|ABM92789.1|  520|Drosophila melanogaster FI01025p pro...    31   2.7  
BT003469-1|AAO39472.1|  523|Drosophila melanogaster RE70568p pro...    31   2.7  
AE014134-3038|AAF53756.1|  440|Drosophila melanogaster CG10699-P...    31   2.7  
AE014134-3037|AAF53758.2|  520|Drosophila melanogaster CG10699-P...    31   2.7  
AF109306-1|AAD02889.1|  440|Drosophila melanogaster LIM homeodom...    30   4.8  

>AY071724-1|AAL49346.1|  121|Drosophila melanogaster RH40291p
           protein.
          Length = 121

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = +1

Query: 85  MNSKLLYFFATVLVCVNAE-VYWEDEEGYPVSGQFSKRHPRDVTWDKQVG 231
           MNS L+    + L  V A  + W +E+        S  HP  V W   VG
Sbjct: 1   MNSTLVILLLSALALVQARNIRWSEEDNSSQGPSLSHPHPHSVNWPCDVG 50


>AE014297-3068|AAF55934.1|  121|Drosophila melanogaster CG17820-PA
           protein.
          Length = 121

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 16/50 (32%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = +1

Query: 85  MNSKLLYFFATVLVCVNAE-VYWEDEEGYPVSGQFSKRHPRDVTWDKQVG 231
           MNS L+    + L  V A  + W +E+        S  HP  V W   VG
Sbjct: 1   MNSTLVILLLSALALVQARNIRWSEEDNSSQGPSLSHPHPHSVNWPCDVG 50


>AE013599-3504|AAF46928.2| 1711|Drosophila melanogaster CG3820-PA
            protein.
          Length = 1711

 Score = 31.9 bits (69), Expect = 1.2
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = -3

Query: 588  RNSAXTPTSGLL*PNSFETIPPAERRVFLSRSHTPE--PVAVIPDLPPICLFISIAAS 421
            +++A +P S     N F +IP AE  VF   +  P     A  PD PP  LF S A S
Sbjct: 1375 QSAAKSPVSSA---NIFGSIPKAETSVFGGATTAPSNTTAAATPDAPPAGLFASAAIS 1429


>AY094967-1|AAM11320.1| 1711|Drosophila melanogaster SD07675p protein.
          Length = 1711

 Score = 31.5 bits (68), Expect = 1.6
 Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
 Frame = -3

Query: 588  RNSAXTPTSGLL*PNSFETIPPAERRVFLSRSHTPE--PVAVIPDLPPICLFISIAAS 421
            +++A +P S     N F +IP AE  VF   +  P     A  PD PP  LF S A S
Sbjct: 1375 QSAAKSPVSS---GNIFGSIPKAETSVFGGATTAPSNTTAAATPDAPPAGLFASAAIS 1429


>BT029915-1|ABM92789.1|  520|Drosophila melanogaster FI01025p
           protein.
          Length = 520

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 332 PGRPTAPXSWDPQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 466
           P  P +P SW     STN     + AN N+ ++ + N   GG SG
Sbjct: 459 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSSSHNNNNSSGGGSG 503


>BT003469-1|AAO39472.1|  523|Drosophila melanogaster RE70568p
           protein.
          Length = 523

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 332 PGRPTAPXSWDPQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 466
           P  P +P SW     STN     + AN N+ ++ + N   GG SG
Sbjct: 462 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSSSHNNNNSSGGGSG 506


>AE014134-3038|AAF53756.1|  440|Drosophila melanogaster CG10699-PA,
           isoform A protein.
          Length = 440

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 332 PGRPTAPXSWDPQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 466
           P  P +P SW     STN     + AN N+ ++ + N   GG SG
Sbjct: 379 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSSSHNNNNSSGGGSG 423


>AE014134-3037|AAF53758.2|  520|Drosophila melanogaster CG10699-PB,
           isoform B protein.
          Length = 520

 Score = 30.7 bits (66), Expect = 2.7
 Identities = 16/45 (35%), Positives = 22/45 (48%)
 Frame = +2

Query: 332 PGRPTAPXSWDPQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 466
           P  P +P SW     STN     + AN N+ ++ + N   GG SG
Sbjct: 459 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSSSHNNNNSSGGGSG 503


>AF109306-1|AAD02889.1|  440|Drosophila melanogaster LIM homeodomain
           transcriptionfactor protein.
          Length = 440

 Score = 29.9 bits (64), Expect = 4.8
 Identities = 16/45 (35%), Positives = 21/45 (46%)
 Frame = +2

Query: 332 PGRPTAPXSWDPQGDSTNYGGRLDWANKNAEAAIDINRQIGGRSG 466
           P  P +P SW     STN     + AN N+  + + N   GG SG
Sbjct: 379 PDFPPSPDSWLGDSGSTNTTSANNNANNNSSRSHNNNNSSGGGSG 423


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,051,012
Number of Sequences: 53049
Number of extensions: 764690
Number of successful extensions: 1849
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1799
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1849
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4229643912
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)