Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_P03
(954 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 35 0.099
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 35 0.099
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 0.19
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 33 0.30
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.30
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.30
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.30
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 33 0.40
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 31 0.92
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 25 4.1
Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical p... 29 4.9
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 28 8.6
U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog (hedg... 28 8.6
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 28 8.6
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 34.7 bits (76), Expect = 0.099
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Frame = -1
Query: 954 PXXGCFXGGXXXXXXXPPP-PXXXGGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPPP 787
P C G PP P GG G GG PPPPPPP
Sbjct: 13 PALACIGGAGSAGGCCPPSQPSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPP 69
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 792 GGGGGXXXXXXXXPPXPXPPP 854
GGGGG PP P PPP
Sbjct: 50 GGGGGSYAAAPALPPPPPPPP 70
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 34.7 bits (76), Expect = 0.099
Identities = 18/57 (31%), Positives = 18/57 (31%), Gaps = 1/57 (1%)
Frame = -1
Query: 954 PXXGCFXGGXXXXXXXPPP-PXXXGGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPPP 787
P C G PP P GG G GG PPPPPPP
Sbjct: 13 PALACIGGAGSAGGCCPPSQPSCGGGAPPCSSSSYATGGGGGSYAAAPALPPPPPPP 69
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 792 GGGGGXXXXXXXXPPXPXPPP 854
GGGGG PP P PPP
Sbjct: 50 GGGGGSYAAAPALPPPPPPPP 70
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 852 GGGXXGGXXXXXXXXPPPPPP 790
GGG GG PPPPPP
Sbjct: 39 GGGCGGGGGCGGGCAPPPPPP 59
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 852 GGGXXGGXXXXXXXXPPPPPP 790
GGG GG PPPPPP
Sbjct: 96 GGGCGGGGGCGGGCAPPPPPP 116
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 852 GGGXXGGXXXXXXXXPPPPPPP 787
GGG GG PPPPPP
Sbjct: 38 GGGGCGGGGGCGGGCAPPPPPP 59
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 853 GGGXGXGGXXXXXXXXPPPPP 791
GGG G GG PPPPP
Sbjct: 39 GGGCGGGGGCGGGCAPPPPPP 59
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 852 GGGXXGGXXXXXXXXPPPPPPP 787
GGG GG PPPPPP
Sbjct: 95 GGGGCGGGGGCGGGCAPPPPPP 116
Score = 28.7 bits (61), Expect(2) = 0.19
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 853 GGGXGXGGXXXXXXXXPPPPP 791
GGG G GG PPPPP
Sbjct: 96 GGGCGGGGGCGGGCAPPPPPP 116
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 853 GGGXGXGGXXXXXXXXPPPPPP 788
GGG G GG PPPPP
Sbjct: 37 GGGGGCGGGGGCGGGCAPPPPP 58
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 853 GGGXGXGGXXXXXXXXPPPPPP 788
GGG G GG PPPPP
Sbjct: 94 GGGGGCGGGGGCGGGCAPPPPP 115
Score = 23.8 bits (49), Expect(2) = 0.19
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = -3
Query: 907 PPPPXXXXGXKXKKKXKXGGGXGXGG 830
PPPP G GGG G GG
Sbjct: 56 PPPPACGGGCGGGGGGCGGGGGGCGG 81
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 33.1 bits (72), Expect = 0.30
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = -1
Query: 933 GGXXXXXXXPPPPXXXGGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPPP 787
GG PP GG GGG GG PPPPPPP
Sbjct: 59 GGFGGNNYNNGPPPFDGGYNRP----YGGGGGGGYGRPQGYVPPPPPPP 103
Score = 31.1 bits (67), Expect = 1.2
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +2
Query: 788 GGGGGGGXXXXXXLXPPXXPPP 853
GGGGGGG PP PPP
Sbjct: 82 GGGGGGGYGRPQGYVPPPPPPP 103
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -1
Query: 906 PPPPXXXGGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPPP 787
PPPP GG GG GG PPPPPPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGG--------PPPPPPP 790
Score = 32.3 bits (70), Expect = 0.53
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 906 PPPPXXXGGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPPP 787
PPPP GG GG PPPPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -1
Query: 933 GGXXXXXXXPPPPXXXGGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPPP 787
GG PPPP GG GG PPPPPPP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPP-----ISGGPPPPPPPPGGCPPPPPPPP 776
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -1
Query: 906 PPPPXXXGGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPPP 787
PPPP GG GG GG PPPPPPP
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGG--------PPPPPPP 790
Score = 32.3 bits (70), Expect = 0.53
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 906 PPPPXXXGGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPPP 787
PPPP GG GG PPPPPPP
Sbjct: 726 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 765
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -1
Query: 933 GGXXXXXXXPPPPXXXGGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPPP 787
GG PPPP GG GG PPPPPPP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPP-----ISGGPPPPPPPPGGCPPPPPPPP 776
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.30
Identities = 17/40 (42%), Positives = 17/40 (42%)
Frame = -1
Query: 906 PPPPXXXGGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPPP 787
PPPP GG GG GG PPPPPPP
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGG--------PPPPPPP 373
Score = 32.3 bits (70), Expect = 0.53
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -1
Query: 906 PPPPXXXGGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPPP 787
PPPP GG GG PPPPPPP
Sbjct: 309 PPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPP 348
Score = 30.7 bits (66), Expect = 1.6
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -1
Query: 933 GGXXXXXXXPPPPXXXGGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPPP 787
GG PPPP GG GG PPPPPPP
Sbjct: 316 GGLPPITGGPPPPPPPGGLPP-----ISGGPPPPPPPPGGCPPPPPPPP 359
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 32.7 bits (71), Expect = 0.40
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = -3
Query: 853 GGGXGXGGXXXXXXXXPPPPPPF 785
GGG G GG PPPPPP+
Sbjct: 196 GGGGGSGGSGGGSGRFPPPPPPY 218
Score = 29.5 bits (63), Expect = 3.7
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = -1
Query: 900 PPXXXGGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPP 790
PP G GGG GG PPPPPP
Sbjct: 181 PPSNDFGPGGGGGGMGGGGGSGGSGGGSGRFPPPPPP 217
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 31.5 bits (68), Expect = 0.92
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = -3
Query: 853 GGGXGXGGXXXXXXXXPPPPPP 788
GGG G GG PPPPPP
Sbjct: 52 GGGCGYGGGYGCGIPPPPPPPP 73
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 852 GGGXXGGXXXXXXXXPPPPPPP 787
GGG G PPPPPPP
Sbjct: 51 GGGGCGYGGGYGCGIPPPPPPP 72
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 852 GGGXXGGXXXXXXXXPPPPPPP 787
GGG G PPPPPPP
Sbjct: 52 GGGCGYGGGYGCGIPPPPPPPP 73
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 24.6 bits (51), Expect(2) = 4.1
Identities = 9/20 (45%), Positives = 9/20 (45%)
Frame = -1
Query: 846 GXXGGXXXXXXXXPPPPPPP 787
G G PPPPPPP
Sbjct: 564 GAVAGLKSVPGGPPPPPPPP 583
Score = 23.0 bits (47), Expect(2) = 4.1
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 807 PPPPPPPF 784
PPPPPP F
Sbjct: 580 PPPPPPSF 587
>Z77662-15|CAI79240.1| 255|Caenorhabditis elegans Hypothetical
protein F47B8.14 protein.
Length = 255
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -1
Query: 852 GGGXXGGXXXXXXXXPPPPPP 790
GGG GG PPPPPP
Sbjct: 26 GGGYSGGGGGGGDAAPPPPPP 46
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = -1
Query: 903 PPPXXXGGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPPP 787
PPP G + G PPPPPPP
Sbjct: 503 PPPRNNGNNNGNGRPMKPPSSSGSGSNRRSGPPPPPPPP 541
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -1
Query: 885 GGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPPP 787
GG G GG PPPPPPP
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -1
Query: 885 GGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPPP 787
GG G GG PPPPPPP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPP 309
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -1
Query: 885 GGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPPP 787
GG G GG PPPPPPP
Sbjct: 276 GGGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPP 308
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = -1
Query: 885 GGXKXKKKXXXGGGXXGGXXXXXXXXPPPPPPP 787
GG G GG PPPPPPP
Sbjct: 277 GGGGGSSGGYAGSSGGGGYSAPAAAPPPPPPPP 309
>U64857-7|AAC25861.2| 373|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 8 protein.
Length = 373
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -1
Query: 852 GGGXXGGXXXXXXXXPPPPPPP 787
GGG G PPPPPPP
Sbjct: 217 GGGNNGFFVPVPVVIPPPPPPP 238
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = -3
Query: 853 GGGXGXGGXXXXXXXXPPPPPP 788
GGG G GG PPPPP
Sbjct: 24 GGGGGGGGCAPAAPACAPPPPP 45
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,399,337
Number of Sequences: 27780
Number of extensions: 293117
Number of successful extensions: 3051
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1699
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2475644248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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