Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_P01
(882 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 79 1e-13
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 5e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 2e-06
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 55 2e-06
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 53 1e-05
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 44 0.007
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 42 0.021
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.084
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 39 0.19
UniRef50_A7BAA3 Cluster: Putative uncharacterized protein; n=1; ... 37 0.78
UniRef50_A7NJ41 Cluster: SCP-like extracellular precursor; n=2; ... 35 2.4
UniRef50_A0BCT9 Cluster: Chromosome undetermined scaffold_10, wh... 35 3.2
UniRef50_UPI0000E81938 Cluster: PREDICTED: hypothetical protein;... 34 5.5
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_Q82HS3 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer ariet... 33 7.3
UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillar... 33 9.6
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 79.4 bits (187), Expect = 1e-13
Identities = 43/59 (72%), Positives = 43/59 (72%)
Frame = +1
Query: 550 PWTSITKIXAQVRGGETRXDYKDTRPSPPWXAPSCALLFPTPPALPDTCPAFLPFREAW 726
P TSITKI AQVRGGETR DYKDTR P APSCALLF P LPDTCP F REAW
Sbjct: 22 PLTSITKIDAQVRGGETRQDYKDTRRF-PLEAPSCALLF-RPCRLPDTCPPF-SLREAW 77
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.1 bits (149), Expect = 5e-09
Identities = 38/57 (66%), Positives = 39/57 (68%)
Frame = -3
Query: 553 RGAEPMEKRQQRGLFTVPGLLLAFCSHVLSCVIPLILWITVLPPLSELIPLAAAERP 383
RGAEPMEKR + L V LL CS L PLILWITVLPPLSEL PLAA ERP
Sbjct: 4 RGAEPMEKRLRCWLLPVLCFLLT-CSFRL---YPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 55.6 bits (128), Expect = 2e-06
Identities = 31/54 (57%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 296 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQG 454
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQG 319
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 55.2 bits (127), Expect = 2e-06
Identities = 28/39 (71%), Positives = 29/39 (74%)
Frame = +1
Query: 550 PWTSITKIXAQVRGGETRXDYKDTRPSPPWXAPSCALLF 666
P TSITK AQ+ GGETR DYKDTR P APSCALLF
Sbjct: 58 PLTSITKSDAQISGGETRQDYKDTRRF-PLAAPSCALLF 95
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 52.8 bits (121), Expect = 1e-05
Identities = 23/33 (69%), Positives = 26/33 (78%)
Frame = +2
Query: 320 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLT 418
R +C G +PLPRSLTR ARSFGCGERY+LT
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLT 58
Score = 51.6 bits (118), Expect = 3e-05
Identities = 29/46 (63%), Positives = 30/46 (65%)
Frame = +1
Query: 550 PWTSITKIXAQVRGGETRXDYKDTRPSPPWXAPSCALLFPTPPALP 687
P TSI K AQ+ GGETR DYKD R P APSCALLF P LP
Sbjct: 90 PLTSIAKSDAQISGGETRQDYKDPRRF-PLVAPSCALLF-LPFGLP 133
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +2
Query: 98 DPDMIRYIDEFGQTTTRMQ 154
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 43.6 bits (98), Expect = 0.007
Identities = 22/50 (44%), Positives = 32/50 (64%)
Frame = +1
Query: 520 VAGVFP*APPPWTSITKIXAQVRGGETRXDYKDTRPSPPWXAPSCALLFP 669
++ +FP PP T+ITKI Q + +T+ +YK T P P +PS +LLFP
Sbjct: 65 LSSLFPYNSPPLTTITKIYPQFKNTQTQHNYKYTTPF-PLQSPSYSLLFP 113
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.9 bits (94), Expect = 0.021
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +3
Query: 222 INKLTTTIAFILCFRFRXEVWEVFSALMNRPTRGERRFAYW 344
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.084
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 366 ERGSGRAPNTQTASPRALADSLMQ 295
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 38.7 bits (86), Expect = 0.19
Identities = 25/44 (56%), Positives = 26/44 (59%)
Frame = -2
Query: 713 KGRKAGQVSGKAGGVGNRRAHEGAXQGGXGLVSL*SCRVSPPLT 582
KG+KA QVSGK G NRRAHEGA G SL PPLT
Sbjct: 58 KGKKAEQVSGKRQG-RNRRAHEGA-AGEKSPASLSPVGFRPPLT 99
>UniRef50_A7BAA3 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 2443
Score = 36.7 bits (81), Expect = 0.78
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Frame = -2
Query: 665 NRRAHEGAXQGGXGLVSL*SCRVSPPLT*AXIFVMLVQGGGAYGKTPATRPF-YGSWPFA 489
N A+ G Q G G V L + +V PL FV GGG Y T + Y SW +
Sbjct: 291 NGSAYNG-NQNGIGFVELQNIKVVDPLPEGAEFVSAT-GGGVYDSVTRTVTWSYDSWSWQ 348
Query: 488 GLLLTCSFLRYPPDSVD 438
+ LRYP S D
Sbjct: 349 NPIQNTVVLRYPQGSYD 365
>UniRef50_A7NJ41 Cluster: SCP-like extracellular precursor; n=2;
Roseiflexus castenholzii DSM 13941|Rep: SCP-like
extracellular precursor - Roseiflexus castenholzii DSM
13941
Length = 407
Score = 35.1 bits (77), Expect = 2.4
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +1
Query: 625 PSPPWXAPSCALLFPTPPALPDTCPAFLP 711
P+PP P+ L FPTPP P P+ P
Sbjct: 60 PTPPATPPAAPLAFPTPPVTPPAAPSAFP 88
>UniRef50_A0BCT9 Cluster: Chromosome undetermined scaffold_10, whole
genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_10,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 538
Score = 34.7 bits (76), Expect = 3.2
Identities = 16/40 (40%), Positives = 21/40 (52%)
Frame = -2
Query: 749 GVRV*ERXXASRKGRKAGQVSGKAGGVGNRRAHEGAXQGG 630
G ++ ER RKG++ G GK G GNR G +GG
Sbjct: 480 GQQIRERSQDDRKGKRGGDRGGKGGDRGNRGGDRGNRRGG 519
>UniRef50_UPI0000E81938 Cluster: PREDICTED: hypothetical protein;
n=2; Gallus gallus|Rep: PREDICTED: hypothetical protein
- Gallus gallus
Length = 404
Score = 33.9 bits (74), Expect = 5.5
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +3
Query: 705 SPLPGSXAPFSYPHXXXYPXXRCXGPSASQXWACVAPTPPFQPRPXA 845
S LPGS PH + C G A WA V P P + RP A
Sbjct: 196 SHLPGSPPLPPSPHHSRHQPLTCAGLPAPPRWAAVTPRAPNRRRPNA 242
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.5
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 256 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 92
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q82HS3 Cluster: Putative uncharacterized protein; n=1;
Streptomyces avermitilis|Rep: Putative uncharacterized
protein - Streptomyces avermitilis
Length = 412
Score = 33.5 bits (73), Expect = 7.3
Identities = 18/54 (33%), Positives = 23/54 (42%)
Frame = +3
Query: 708 PLPGSXAPFSYPHXXXYPXXRCXGPSASQXWACVAPTPPFQPRPXAALIPGNXP 869
P P + P++ P P PSA + W+ AP PP P AA P P
Sbjct: 89 PSPPTEEPWAAPPTPEEPWSSPPSPSAEEPWSSPAPAPP--EEPWAAPPPAEEP 140
>UniRef50_Q8GUF1 Cluster: Reverse transcriptase; n=1; Cicer
arietinum|Rep: Reverse transcriptase - Cicer arietinum
(Chickpea) (Garbanzo)
Length = 37
Score = 33.5 bits (73), Expect = 7.3
Identities = 14/17 (82%), Positives = 15/17 (88%)
Frame = +3
Query: 429 NTVIHRIRGITQERTCE 479
NTVIH +GITQERTCE
Sbjct: 21 NTVIHXNQGITQERTCE 37
>UniRef50_A4Q8I4 Cluster: MobA protein; n=1; Listonella anguillarum
serovar O2|Rep: MobA protein - Listonella anguillarum
serovar O2
Length = 548
Score = 33.1 bits (72), Expect = 9.6
Identities = 15/55 (27%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -3
Query: 211 NGYK*SNSITNFTNKAFFSLHSSCG-LSKLINVSYHVWIQLTLXKGRSAAAVPTI 50
NG+K N + + L++ CG L +L+ + + + LT+ +GR A P++
Sbjct: 488 NGFKAGNGVERAVTNDYDELNAKCGHLDRLLRETDPIGLTLTMEQGRKADPTPSV 542
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 716,827,030
Number of Sequences: 1657284
Number of extensions: 13560855
Number of successful extensions: 40135
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 37148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40032
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79112361923
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -