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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_O22
         (1013 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical pr...    39   0.005
U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA bi...    39   0.005
U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical pr...    33   0.43 
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ...    30   2.3  
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ...    30   2.3  
Z66565-6|CAA91483.1|  165|Caenorhabditis elegans Hypothetical pr...    30   3.0  
U41557-6|AAA83307.1|  589|Caenorhabditis elegans Collagen sequen...    30   3.0  
U41557-2|AAA83301.1|  309|Caenorhabditis elegans Hypothetical pr...    30   3.0  
AF000298-11|AAM97960.1|  518|Caenorhabditis elegans Prion-like-(...    30   3.0  
AF000298-10|AAM97961.1|  539|Caenorhabditis elegans Prion-like-(...    30   3.0  
AF000298-8|AAC48255.2|  524|Caenorhabditis elegans Prion-like-(q...    30   3.0  
U97196-12|AAB52456.2|  564|Caenorhabditis elegans Hypothetical p...    29   4.0  
AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical...    29   4.0  
AC084154-11|AAK29874.1|  350|Caenorhabditis elegans Hypothetical...    29   4.0  
U41017-1|AAC48211.1|  343|Caenorhabditis elegans Hypothetical pr...    29   5.3  
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def...    29   5.3  
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def...    29   5.3  
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.    29   5.3  
Z98866-8|CAB11562.2|  425|Caenorhabditis elegans Hypothetical pr...    29   7.0  
U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (gr...    29   7.0  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    28   9.2  
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ...    28   9.2  

>Z46676-8|CAB60993.2|  388|Caenorhabditis elegans Hypothetical protein
            C08B11.5 protein.
          Length = 388

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 31/122 (25%), Positives = 35/122 (28%), Gaps = 9/122 (7%)
 Frame = +1

Query: 673  PPNXXXXXPPXXXXPXPXARTXPXX----FPPXAXXXXXXXXXXXXXXXXXXPPXPSRAL 840
            PP+     PP    P    R  P      +PP                    PP PSR  
Sbjct: 267  PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 326

Query: 841  XPSX-----PXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPSPXX 1005
             P       P PP    P   P P P   P  G      P P  P  P +     P P  
Sbjct: 327  PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 386

Query: 1006 PT 1011
            P+
Sbjct: 387  PS 388



 Score = 30.3 bits (65), Expect = 2.3
 Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
 Frame = +3

Query: 564 PPPXPRXT---PPXHXXPXXTXXTPXPPNIFXXXPXXXXPPKRXXXLP 698
           PPP P  T   PP    P  T   P PP+     P    PP R    P
Sbjct: 264 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP 311


>U24189-3|AAC47514.1|  398|Caenorhabditis elegans RRM-type RNA binding
            protein protein.
          Length = 398

 Score = 39.1 bits (87), Expect = 0.005
 Identities = 31/122 (25%), Positives = 35/122 (28%), Gaps = 9/122 (7%)
 Frame = +1

Query: 673  PPNXXXXXPPXXXXPXPXARTXPXX----FPPXAXXXXXXXXXXXXXXXXXXPPXPSRAL 840
            PP+     PP    P    R  P      +PP                    PP PSR  
Sbjct: 277  PPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFG 336

Query: 841  XPSX-----PXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPSPXX 1005
             P       P PP    P   P P P   P  G      P P  P  P +     P P  
Sbjct: 337  PPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPP 396

Query: 1006 PT 1011
            P+
Sbjct: 397  PS 398



 Score = 30.3 bits (65), Expect = 2.3
 Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
 Frame = +3

Query: 564 PPPXPRXT---PPXHXXPXXTXXTPXPPNIFXXXPXXXXPPKRXXXLP 698
           PPP P  T   PP    P  T   P PP+     P    PP R    P
Sbjct: 274 PPPPPSVTPMPPPMPPTPGMTPRPPPPPSSGMWPPPPPPPPGRTPGPP 321


>U41538-2|AAG00010.1|  997|Caenorhabditis elegans Hypothetical protein
            R04E5.8a protein.
          Length = 997

 Score = 32.7 bits (71), Expect = 0.43
 Identities = 24/68 (35%), Positives = 24/68 (35%), Gaps = 4/68 (5%)
 Frame = +1

Query: 817  PPXPSRALXPSXPXPPXXXXPLXSP--XPXPXEXPXYGXXPXXXPHPRXPSGPS--TLXX 984
            PP  SRA   S P PP    P   P   P P   P     P   P PR P  P       
Sbjct: 127  PPRKSRAGGSSPPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRP-PRTPPSPEPRNPPR 185

Query: 985  HXPSPXXP 1008
              PSP  P
Sbjct: 186  TPPSPIPP 193


>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
            protein Y53C10A.10 protein.
          Length = 1582

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 20/64 (31%), Positives = 24/64 (37%)
 Frame = +1

Query: 820  PXPSRALXPSXPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPSP 999
            P PS    PS P  P    P     P P      G  P   P P  PS P+    + P+P
Sbjct: 977  PGPSGPNGPSDPNKPSPNGPSDPVKPSPSGPSPNGPSP-NGPSPNGPS-PNGPSPNGPTP 1034

Query: 1000 XXPT 1011
              P+
Sbjct: 1035 NWPS 1038



 Score = 29.9 bits (64), Expect = 3.0
 Identities = 20/64 (31%), Positives = 24/64 (37%)
 Frame = +1

Query: 817  PPXPSRALXPSXPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPS 996
            P  P+    P+ P P     PL    P P   P  G      P P  P+GPS    + P 
Sbjct: 1254 PNGPNEPSDPNRPGPNGPNGPLDPNKPGP-NGPN-GPSDPNKPGPNGPNGPS--DPNKPG 1309

Query: 997  PXXP 1008
            P  P
Sbjct: 1310 PNGP 1313



 Score = 29.1 bits (62), Expect = 5.3
 Identities = 20/68 (29%), Positives = 23/68 (33%), Gaps = 3/68 (4%)
 Frame = +1

Query: 817  PPXPSRALXPSXPXP--PXXXXPLXSPXPX-PXEXPXYGXXPXXXPHPRXPSGPSTLXXH 987
            PP P+    P+ P P  P    P     P  P      G      P P  PS P      
Sbjct: 946  PPSPNGPSDPNKPSPNGPSPNGPNGPSDPNKPGPSGPNGPSDPNKPSPNGPSDPVKPSPS 1005

Query: 988  XPSPXXPT 1011
             PSP  P+
Sbjct: 1006 GPSPNGPS 1013



 Score = 28.7 bits (61), Expect = 7.0
 Identities = 18/64 (28%), Positives = 22/64 (34%)
 Frame = +1

Query: 820  PXPSRALXPSXPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPSP 999
            P P+    P  P P     P       P      G      P P  P+GPS    + PSP
Sbjct: 936  PKPNPGPGPGPPSPNGPSDPNKPSPNGPSPNGPNGPSDPNKPGPSGPNGPS--DPNKPSP 993

Query: 1000 XXPT 1011
              P+
Sbjct: 994  NGPS 997


>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
           protein Y48G9A.4 protein.
          Length = 1115

 Score = 30.3 bits (65), Expect = 2.3
 Identities = 14/44 (31%), Positives = 17/44 (38%)
 Frame = +1

Query: 844 PSXPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPST 975
           P  P PP       +P P P   P  G  P   P P    GP++
Sbjct: 561 PPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMGPAS 604


>Z66565-6|CAA91483.1|  165|Caenorhabditis elegans Hypothetical
           protein T04F8.8 protein.
          Length = 165

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 16/51 (31%), Positives = 17/51 (33%)
 Frame = +1

Query: 817 PPXPSRALXPSXPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGP 969
           PP P     P+ P P     P   P P P   P     P   PHP     P
Sbjct: 97  PPPPP---PPTQPEPEPEPRPEPQPEPQPEPQPEPQPEPQPEPHPEPAPEP 144


>U41557-6|AAA83307.1|  589|Caenorhabditis elegans Collagen sequence
            x-hybridizingprotein 1 protein.
          Length = 589

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 20/66 (30%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
 Frame = +1

Query: 817  PPXPSRALXPSXPXPPXXXX-PLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXP 993
            PP P     PS   P      PL +  P P E P +       P P  P+GP+      P
Sbjct: 511  PPGP---FDPSGAPPSGMPPVPLPTDLPIPSESPSFFQWIFGRPKPSGPAGPAP-SGEPP 566

Query: 994  SPXXPT 1011
             P  P+
Sbjct: 567  GPFDPS 572


>U41557-2|AAA83301.1|  309|Caenorhabditis elegans Hypothetical protein
            C50F7.5 protein.
          Length = 309

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 19/64 (29%), Positives = 19/64 (29%)
 Frame = +1

Query: 817  PPXPSRALXPSXPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPS 996
            P  PS    PS P  P    P   P P     P     P   P  R P  P       P 
Sbjct: 214  PVDPSEDPKPSEPPSPGPVDPSDEPSPSDPPGP---PGPPGPPTRRPPGPPGPPTRRPPG 270

Query: 997  PXXP 1008
            P  P
Sbjct: 271  PPGP 274


>AF000298-11|AAM97960.1|  518|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform b protein.
          Length = 518

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 13/38 (34%), Positives = 14/38 (36%)
 Frame = +3

Query: 525 GNCPSXPSXXXXXPPPXPRXTPPXHXXPXXTXXTPXPP 638
           G  P  P      PPP PR +PP    P        PP
Sbjct: 286 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323


>AF000298-10|AAM97961.1|  539|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform c protein.
          Length = 539

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 13/38 (34%), Positives = 14/38 (36%)
 Frame = +3

Query: 525 GNCPSXPSXXXXXPPPXPRXTPPXHXXPXXTXXTPXPP 638
           G  P  P      PPP PR +PP    P        PP
Sbjct: 307 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344


>AF000298-8|AAC48255.2|  524|Caenorhabditis elegans
           Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
           isoform a protein.
          Length = 524

 Score = 29.9 bits (64), Expect = 3.0
 Identities = 13/38 (34%), Positives = 14/38 (36%)
 Frame = +3

Query: 525 GNCPSXPSXXXXXPPPXPRXTPPXHXXPXXTXXTPXPP 638
           G  P  P      PPP PR +PP    P        PP
Sbjct: 292 GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329


>U97196-12|AAB52456.2|  564|Caenorhabditis elegans Hypothetical
            protein B0207.1 protein.
          Length = 564

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 16/63 (25%), Positives = 23/63 (36%)
 Frame = +1

Query: 820  PXPSRALXPSXPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPSP 999
            P P+    P  P PP    P+  P   P +       P   PHP   +  + +    P+P
Sbjct: 89   PLPTPVKTPPLPRPPGNLNPVQQP-QIPVQRTPPQCPPPPVPHPPQITQMAPILPTSPAP 147

Query: 1000 XXP 1008
              P
Sbjct: 148  PPP 150


>AL023835-10|CAA19494.2|  691|Caenorhabditis elegans Hypothetical
           protein Y37A1B.11 protein.
          Length = 691

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
 Frame = +1

Query: 820 PXPSRALXPSXPXPPXXXXPL-XSPXPXPXEXPXYGXXPXXXPHP 951
           P PS    P+ P PP    P   +P P P   P     P   P P
Sbjct: 538 PEPSPVREPTPPPPPREPTPREPTPEPEPVREPTPPPPPPAKPRP 582


>AC084154-11|AAK29874.1|  350|Caenorhabditis elegans Hypothetical
           protein Y22D7AR.1 protein.
          Length = 350

 Score = 29.5 bits (63), Expect = 4.0
 Identities = 17/60 (28%), Positives = 18/60 (30%)
 Frame = +1

Query: 820 PXPSRALXPSXPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPSP 999
           P P     P  P P     P   P P P   P     P   P P+    P T     P P
Sbjct: 207 PKPEPKPKPK-PEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEPKPKTKLKSEPKP 265



 Score = 29.5 bits (63), Expect = 4.0
 Identities = 17/61 (27%), Positives = 20/61 (32%), Gaps = 1/61 (1%)
 Frame = +1

Query: 820 PXPSRALXPSX-PXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPS 996
           P P   L P   P P     P+    P P   P     P   P P+  S P+      P 
Sbjct: 263 PKPKPKLKPKPKPNPKPEPNPMPELKPKPKHKPNSRPKPNPRPKPKPRSKPNPKPKPRPK 322

Query: 997 P 999
           P
Sbjct: 323 P 323



 Score = 28.7 bits (61), Expect = 7.0
 Identities = 17/64 (26%), Positives = 20/64 (31%)
 Frame = +1

Query: 820  PXPSRALXPSXPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPSP 999
            P P+    P  P P     P   P P P   P     P   P+P+    P       P P
Sbjct: 195  PKPNPKPEPK-PKPKPEPKPKPKPEPKPKPKPKPKPKPKPNPNPKPEPKPKPKPKPKPEP 253

Query: 1000 XXPT 1011
               T
Sbjct: 254  KPKT 257


>U41017-1|AAC48211.1|  343|Caenorhabditis elegans Hypothetical
           protein T26C11.2 protein.
          Length = 343

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 15/53 (28%), Positives = 17/53 (32%), Gaps = 2/53 (3%)
 Frame = +1

Query: 847 SXPXPPXXXXPLXSPXPX--PXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPSP 999
           S P P     P   P P   P   P     P   P P+    P  +  H P P
Sbjct: 6   SKPTPKPKSEPFPKPMPKSKPKSEPFPSPMPFPKPMPKPKPKPKPMPKHKPKP 58



 Score = 29.1 bits (62), Expect = 5.3
 Identities = 17/60 (28%), Positives = 20/60 (33%)
 Frame = +1

Query: 820 PXPSRALXPSXPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPSP 999
           P P     P  P P     P+  P P P   P     P   P P+    P  +  H P P
Sbjct: 68  PMPKHKPKP-FPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMPFPK----PKPMPKHKPKP 122



 Score = 28.7 bits (61), Expect = 7.0
 Identities = 17/60 (28%), Positives = 19/60 (31%)
 Frame = +1

Query: 820 PXPSRALXPSXPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPSP 999
           P P     P  P P     P+  P P P   P     P   P P   S P +     P P
Sbjct: 114 PMPKHKPKP-FPKPMLFPKPMPIPKPMPFPKPMLFPKPMPFPKPMPKSKPKSEPFPNPMP 172


>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
            protein 1, isoformb protein.
          Length = 1437

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 19/64 (29%), Positives = 19/64 (29%)
 Frame = +1

Query: 817  PPXPSRALXPSXPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPS 996
            PP P   L P    PP    P   P P     P     P   P P  P  P       P 
Sbjct: 728  PPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786

Query: 997  PXXP 1008
            P  P
Sbjct: 787  PPPP 790


>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
            protein 1, isoforma protein.
          Length = 1435

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 19/64 (29%), Positives = 19/64 (29%)
 Frame = +1

Query: 817  PPXPSRALXPSXPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPS 996
            PP P   L P    PP    P   P P     P     P   P P  P  P       P 
Sbjct: 728  PPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 786

Query: 997  PXXP 1008
            P  P
Sbjct: 787  PPPP 790


>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
          Length = 1018

 Score = 29.1 bits (62), Expect = 5.3
 Identities = 19/64 (29%), Positives = 19/64 (29%)
 Frame = +1

Query: 817  PPXPSRALXPSXPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPS 996
            PP P   L P    PP    P   P P     P     P   P P  P  P       P 
Sbjct: 311  PPPPPGGLPPITGGPPPPPPPGGLP-PISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPP 369

Query: 997  PXXP 1008
            P  P
Sbjct: 370  PPPP 373


>Z98866-8|CAB11562.2|  425|Caenorhabditis elegans Hypothetical
           protein Y49E10.10 protein.
          Length = 425

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 23/103 (22%), Positives = 28/103 (27%), Gaps = 1/103 (0%)
 Frame = +1

Query: 673 PPNXXXXXPPXXXXPXPXARTXPXXFPPXAXXXXXXXXXXXXXXXXXXP-PXPSRALXPS 849
           PP      PP    P P     P   PP                    P P P  A  P+
Sbjct: 177 PPTTKAPPPPTTKAPPPPTTKAPP--PPTTKAPPPPTTNKEVTTVAPVPKPAPVTAPAPN 234

Query: 850 XPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTL 978
            P P      + +  P     P     P   P P  P   +T+
Sbjct: 235 PPAPENTTAKVETTKPTKAAPPAPTPVPNPVPSPPPPPANTTV 277


>U40799-6|AAA81484.2|  210|Caenorhabditis elegans Ground-like (grd
           related) protein 4 protein.
          Length = 210

 Score = 28.7 bits (61), Expect = 7.0
 Identities = 17/59 (28%), Positives = 19/59 (32%)
 Frame = +1

Query: 817 PPXPSRALXPSXPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXP 993
           PP P     P  P PP    P     P P   P     P   P P  P  P  +  + P
Sbjct: 32  PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPP----PPPPPPPMCPPPPPPMPSYSP 86


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 19/61 (31%), Positives = 19/61 (31%)
 Frame = +1

Query: 817 PPXPSRALXPSXPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPS 996
           PP PSR   PS    P       SP P P   P         P P  P  P  L      
Sbjct: 474 PPPPSRIPNPSPSPQPAEVSK--SPPPPPPLPPIATPSSVPPPPPPPPPPPPALEQEISG 531

Query: 997 P 999
           P
Sbjct: 532 P 532


>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
            protein F59E12.9 protein.
          Length = 1621

 Score = 28.3 bits (60), Expect = 9.2
 Identities = 20/65 (30%), Positives = 20/65 (30%)
 Frame = +1

Query: 817  PPXPSRALXPSXPXPPXXXXPLXSPXPXPXEXPXYGXXPXXXPHPRXPSGPSTLXXHXPS 996
            PP PS  L P  P PP    P  S  P     P     P   P    P  P  L      
Sbjct: 1345 PPPPSDDLTPVPPPPP--PPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPSEEKK 1402

Query: 997  PXXPT 1011
               PT
Sbjct: 1403 NPLPT 1407


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,554,393
Number of Sequences: 27780
Number of extensions: 97298
Number of successful extensions: 795
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 568
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2667870690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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