Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_O21
         (859 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos...    52   1e-07
SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32 |Schi...    31   0.28 
SPAC644.06c |cdr1|nim1|GIN4 family protein kinase Cdr1|Schizosac...    30   0.48 
SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces po...    27   4.5  
SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase |S...    26   6.0  

>SPAC15A10.13 |ppk3||serine/threonine protein kinase
           Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 637

 Score = 52.0 bits (119), Expect = 1e-07
 Identities = 29/83 (34%), Positives = 44/83 (53%)
 Frame = +3

Query: 255 SVFKGEAAAGPLWAVSTPLEKFCNNLLKYRHPCIVRYISAWQQRSTLHLATEYVLPLSHV 434
           SVF    +  P WA     ++ C  +   RHPCI++Y+S ++  + L++ATE V P++  
Sbjct: 49  SVFSISLSTHPEWAELA--DRACETMKTLRHPCIIKYLSTYKSSTHLYIATETVRPVTTE 106

Query: 435 LKTLSPLQICIGLNNILRALVFL 503
           L  LS      GL  +  AL FL
Sbjct: 107 LNELSAEIKTYGLWRVSAALSFL 129


>SPBP23A10.10 |ppk32||serine/threonine protein kinase Ppk32
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 749

 Score = 30.7 bits (66), Expect = 0.28
 Identities = 13/35 (37%), Positives = 16/35 (45%)
 Frame = +1

Query: 505 HDQASXSHNNVSTSAVYVTGDGQWKLXGLPILMSI 609
           H  A   H N+  S+V V   G WKL G     S+
Sbjct: 165 HGSAKVIHYNIRPSSVVVDAKGDWKLCGFSFSQSV 199


>SPAC644.06c |cdr1|nim1|GIN4 family protein kinase
           Cdr1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 593

 Score = 29.9 bits (64), Expect = 0.48
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
 Frame = +3

Query: 285 PLWAVSTPLEKFCNNLLKYRHPCIVRYISAWQQRSTLHLATEYVL--PLSHVLKTLSPL 455
           P+   S  +E     LL  RHP I+R    W     ++LA EYV    L H ++   PL
Sbjct: 44  PIRYASIGMEILMMRLL--RHPNILRLYDVWTDHQHMYLALEYVPDGELFHYIRKHGPL 100


>SPAC222.07c |hri2||eIF2 alpha kinase Hri2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 639

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 9/21 (42%), Positives = 14/21 (66%)
 Frame = +3

Query: 330 LLKYRHPCIVRYISAWQQRST 392
           L K  HP ++RY S+W + +T
Sbjct: 221 LAKMDHPNVIRYFSSWVESTT 241


>SPBC29A10.01 |ccr1|SPBC365.17|NADPH-cytochrome p450 reductase
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 678

 Score = 26.2 bits (55), Expect = 6.0
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 143 GLEIEDKAVEITEFWQQYQATIKDS 217
           G +  DK     E WQQY+  +KDS
Sbjct: 570 GCQYSDKDFLYKEEWQQYKDVLKDS 594


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,210,685
Number of Sequences: 5004
Number of extensions: 64427
Number of successful extensions: 157
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 153
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 157
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 426466470
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)