Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_O21
         (859 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF003134-6|AAB54146.3|  827|Caenorhabditis elegans Hypothetical ...    31   1.1  
AM085500-1|CAJ30198.1|  947|Caenorhabditis elegans autophagy pro...    29   3.2  
AF101315-4|AAO25988.1|  719|Caenorhabditis elegans Hypothetical ...    29   3.2  
AF101315-3|AAC69227.1|  880|Caenorhabditis elegans Hypothetical ...    29   3.2  
Z78018-3|CAB01444.1|  820|Caenorhabditis elegans Hypothetical pr...    29   5.6  
AF016432-6|AAB65383.1|  342|Caenorhabditis elegans Seven tm rece...    28   9.8  

>AF003134-6|AAB54146.3|  827|Caenorhabditis elegans Hypothetical
           protein ZC581.9 protein.
          Length = 827

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +1

Query: 505 HDQASXSHNNVSTSAVYVTGDGQWKLXG 588
           H+ A   H N++  A+YVT    WK+ G
Sbjct: 190 HNSAKMLHGNLTPDAIYVTATKTWKIGG 217


>AM085500-1|CAJ30198.1|  947|Caenorhabditis elegans autophagy
           protein 9 protein.
          Length = 947

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -2

Query: 462 KFVKVKEFSEHDLEVAHILLPNAVSNAVAMLICISQ 355
           K  ++++F  H+L++A   LPN   +A+   IC +Q
Sbjct: 244 KMSEIQQFYAHELKIADDQLPNLTWHAIVKRICEAQ 279


>AF101315-4|AAO25988.1|  719|Caenorhabditis elegans Hypothetical
           protein T22H9.2b protein.
          Length = 719

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -2

Query: 462 KFVKVKEFSEHDLEVAHILLPNAVSNAVAMLICISQ 355
           K  ++++F  H+L++A   LPN   +A+   IC +Q
Sbjct: 244 KMSEIQQFYAHELKIADDQLPNLTWHAIVKRICEAQ 279


>AF101315-3|AAC69227.1|  880|Caenorhabditis elegans Hypothetical
           protein T22H9.2a protein.
          Length = 880

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/36 (33%), Positives = 22/36 (61%)
 Frame = -2

Query: 462 KFVKVKEFSEHDLEVAHILLPNAVSNAVAMLICISQ 355
           K  ++++F  H+L++A   LPN   +A+   IC +Q
Sbjct: 244 KMSEIQQFYAHELKIADDQLPNLTWHAIVKRICEAQ 279


>Z78018-3|CAB01444.1|  820|Caenorhabditis elegans Hypothetical
           protein W07G4.3 protein.
          Length = 820

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = +1

Query: 511 QASXSHNNVSTSAVYVTGDGQWKLXGLPIL 600
           +A  SH N+    V+VT  G WK+ GL ++
Sbjct: 130 EAKLSHENLR-KGVFVTAGGDWKIGGLHLV 158


>AF016432-6|AAB65383.1|  342|Caenorhabditis elegans Seven tm
           receptor protein 228 protein.
          Length = 342

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 28/132 (21%), Positives = 57/132 (43%)
 Frame = -2

Query: 534 IIM*XASLIMPRILKL*ECCLIQCKFVKVKEFSEHDLEVAHILLPNAVSNAVAMLICISQ 355
           I++  A L   +I KL        K +K++    + L V  IL+P  + +  A ++ +  
Sbjct: 220 IVLVFAILCYQKINKLVATTATSAKLIKLQRQLFYAL-VIQILVPFVLMHIPAAIMLVFA 278

Query: 354 YMDVDILINYYKIFLEVSIXXXXXXXXXXXXXQTLNHPLSXLKYLQLSFIVA*YCCQNSV 175
           ++D+D  +  Y   + ++I                N+  + ++YL L       C + S 
Sbjct: 279 FLDID--LGVYSAVVSMTIAIYPAVDPIPTLVIVENYRNAIIRYLSLD------CMRVSS 330

Query: 174 ISTALSSISKPL 139
           ++TA  +I+  L
Sbjct: 331 VTTATPNINTGL 342


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,548,313
Number of Sequences: 27780
Number of extensions: 351384
Number of successful extensions: 793
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 773
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 793
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)