Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_O19
         (877 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0721 - 20931241-20931669                                         35   0.098
08_02_0845 - 21809924-21810265,21810360-21810365                       31   0.92 
01_07_0041 + 40688242-40688278,40688396-40688502,40688612-406887...    29   3.7  
02_02_0418 + 10000744-10000840,10000952-10001023,10001786-100018...    29   4.9  
03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343     29   6.5  
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095...    28   8.5  
06_01_0185 - 1437693-1437834,1437969-1438078,1438214-1438264,143...    28   8.5  

>07_03_0721 - 20931241-20931669
          Length = 142

 Score = 34.7 bits (76), Expect = 0.098
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
 Frame = -2

Query: 729 KGATVSRREKGRTRYPGKAARGRNQGE---RTEGASRGETXGIFIVLSGFATSDLSVDFC 559
           +G T  RR +G+    G AA  R  G+   R  G +     G  +  +       +    
Sbjct: 32  RGTTAFRRNRGQAGVEGDAAMSREDGDDDSRCTGEAAQAAGGGIMAATPLDDGGNAPPAV 91

Query: 558 DARQGGGAYGKTPATRP 508
            AR GG A G+  ATRP
Sbjct: 92  TARNGGQAMGEEAATRP 108


>08_02_0845 - 21809924-21810265,21810360-21810365
          Length = 115

 Score = 31.5 bits (68), Expect = 0.92
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = +1

Query: 535 GSAPLTSITKIDAQVRGGETRQDYKDTXRFPPGSSLGALSLVPTP 669
           G+  L  +T+     RGG  R    D    PP SSL  LS+VP P
Sbjct: 45  GALALPRLTRYRLLQRGGHGRARRGDNAGNPPPSSLYMLSVVPVP 89


>01_07_0041 +
           40688242-40688278,40688396-40688502,40688612-40688707,
           40688859-40688915,40689033-40689194,40689310-40689394,
           40689648-40689738,40689813-40689977,40690121-40690240,
           40690330-40690402,40690482-40690650,40690741-40691651,
           40691839-40691931,40692065-40692255,40692343-40692455,
           40692757-40692783,40693915-40693949
          Length = 843

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 582 RWRNPTGL*RYXAFPPWKLPRCALPGSDPLPL 677
           RW  P+ + R     PWK+   + P  +PLPL
Sbjct: 333 RWDEPSTIPRPDRVSPWKIEPASSPPVNPLPL 364


>02_02_0418 +
           10000744-10000840,10000952-10001023,10001786-10001848,
           10001952-10002008,10002159-10002226,10002327-10002408,
           10002517-10002572,10002934-10003236,10003638-10003724,
           10004454-10004628,10004813-10004934,10005171-10005334,
           10006201-10006455,10006979-10007100,10007220-10007341,
           10007452-10007600,10007649-10007652
          Length = 665

 Score = 29.1 bits (62), Expect = 4.9
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 551 RASQKSTLKSEVAKPDRTIKIPXVSPLEAPSVRSPWFRPLA 673
           +  ++  L   +  PD  IK+  +  LE  + R PW R LA
Sbjct: 173 KEGKEGGLVDALCSPDELIKMSRLWALEIANYRKPWIRSLA 213


>03_02_0916 + 12364557-12364906,12365485-12365592,12365731-12366343
          Length = 356

 Score = 28.7 bits (61), Expect = 6.5
 Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
 Frame = +1

Query: 349 PLPRSLTRCARSF--GCGERYQLTQRR*YGYPQNQGITQ--ERTCEQKASKRPGTV 504
           P PRS  RC      GCG R Q TQR     P N  IT   E TC   ++  P  +
Sbjct: 150 PYPRSYYRCTHKLDQGCGARRQ-TQRC-EADPSNYDITYYGEHTCRDPSTIIPTAI 203


>10_08_0940 -
           21708557-21708733,21709058-21709142,21709330-21709551,
           21710640-21710815,21711883-21711946,21712433-21712507,
           21715114-21715199,21715297-21716715
          Length = 767

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
 Frame = +1

Query: 298 NESAN---ARGEAVCVLGALPLPRSLTRCAR 381
           +ESAN   AR EAV  +G +P+   L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464


>06_01_0185 -
           1437693-1437834,1437969-1438078,1438214-1438264,
           1438877-1439122,1439244-1439315,1439614-1439648,
           1439755-1439845,1440546-1440610,1440733-1440813,
           1441020-1441137,1441535-1441627,1441865-1441997,
           1442471-1442503,1443264-1443343,1443444-1443549,
           1443621-1443795,1443884-1443980,1444819-1445251,
           1445329-1445459,1446052-1446341,1446429-1447002
          Length = 1051

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 12/30 (40%), Positives = 16/30 (53%)
 Frame = +3

Query: 570 RSSQRWRNPTGL*RYXAFPPWKLPRCALPG 659
           RS +RWR+   +  + AF     P CAL G
Sbjct: 321 RSRRRWRHAAAISSFSAFVAENAPSCALSG 350


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,614,137
Number of Sequences: 37544
Number of extensions: 503956
Number of successful extensions: 1462
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1418
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1462
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2467979640
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)