Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_O13
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0177 - 14770777-14772045                                         31   1.6  
02_04_0382 - 22501041-22501279,22501717-22501810                       28   8.5  

>07_03_0177 - 14770777-14772045
          Length = 422

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 31/124 (25%), Positives = 34/124 (27%)
 Frame = -3

Query: 677 GGGXXXXXRGGXKRXXGGXXFFLXXGGGXRXXXXXXXXXXXXXXXXXRXFXGGXKXXGXF 498
           GGG      GG     GG   F   GGG                       GG    G F
Sbjct: 64  GGGFGGGGGGGGGGGFGGGGGFGGGGGGGLGGGGGGGLGGGGGFGKGGGVGGGFGKGGGF 123

Query: 497 XXGXKFFXXXXXRXXXXXXXIFLGVXGXXWXGXGVGGYXGXXXWAGXXXGGKIF*KFSPX 318
             G   F     +       I  G  G    G G+GG  G     G   GG +       
Sbjct: 124 GKGGG-FGGGFGKGGGIGGGIGHGAGGGFGKGGGLGGGIGPGIGGGYGKGGGLGGGIGKG 182

Query: 317 GGXG 306
           GG G
Sbjct: 183 GGLG 186


>02_04_0382 - 22501041-22501279,22501717-22501810
          Length = 110

 Score = 28.3 bits (60), Expect = 8.5
 Identities = 14/38 (36%), Positives = 15/38 (39%), Gaps = 2/38 (5%)
 Frame = +1

Query: 595 PPPXXKKKXXP--PXFLFXPPRXXXLXPPPQKXXGGGG 702
           PPP       P  P +   PP      PPP    GGGG
Sbjct: 56  PPPSPDYYDPPHSPDYYDPPPSPDYYDPPPSPYYGGGG 93


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,775,139
Number of Sequences: 37544
Number of extensions: 183331
Number of successful extensions: 567
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 382
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 528
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)