Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_O11
(880 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0663 - 30991390-30992340 56 3e-08
06_03_1118 + 27756288-27756337,27756505-27756619,27756883-277570... 55 9e-08
06_01_1052 + 8312752-8312862,8312969-8313041,8313285-8313362,831... 52 5e-07
05_07_0134 - 27911920-27912762 50 2e-06
02_04_0261 + 21363787-21363891,21364185-21364286,21365854-213659... 28 0.069
06_01_0080 + 644021-645463 34 0.13
01_05_0431 - 22084474-22084635,22084740-22084844,22084931-220850... 34 0.13
02_02_0184 - 7581345-7581769,7581880-7582296,7582891-7583661,758... 29 3.7
10_01_0244 + 2549102-2549158,2549205-2549334,2549422-2549559,255... 29 4.9
06_02_0156 - 12395660-12396220,12396278-12396298 29 4.9
06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216 29 6.5
03_02_0338 + 7614199-7614450,7614518-7614703,7614815-7614927,761... 29 6.5
07_03_1769 + 29377784-29377878,29377993-29378180,29378340-293784... 28 8.6
03_01_0417 - 3197956-3198438,3198550-3200001,3200116-3200277,320... 28 8.6
>01_06_0663 - 30991390-30992340
Length = 316
Score = 56.4 bits (130), Expect = 3e-08
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 1/128 (0%)
Frame = +3
Query: 195 GLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTS 374
G G MG MA +L+ G+ + Y+ + G T A S ++
Sbjct: 26 GTGVMGQSMAGHLLAAGYALTVYNRTASKAEGLVSRGATLAESPRAAAAAADVIFLMVGF 85
Query: 375 NKVVLDVYLGKD-GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVM 551
V L G +A G LL+D +T DP + +I A K DAPVSGG
Sbjct: 86 PSDVRSTSLDPSTGALAGLAPGGLLVDMTTSDPTLAAEIAEAAAAKSCAAVDAPVSGGDR 145
Query: 552 GAQNATLA 575
GA++ATL+
Sbjct: 146 GARSATLS 153
>06_03_1118 +
27756288-27756337,27756505-27756619,27756883-27757033,
27757219-27757301,27757424-27757519,27757615-27757757,
27757858-27757942,27758158-27758237,27758335-27758422
Length = 296
Score = 54.8 bits (126), Expect = 9e-08
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 12/133 (9%)
Frame = +3
Query: 219 MAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVY 398
MA NLV G+ V +D +++ + + +G+ S ++L S+ VLDVY
Sbjct: 1 MARNLVMAGYKVTVHDVNENTMKKFSDDGIPTKLSPLEVSKSSDVVITMLPSSAHVLDVY 60
Query: 399 LGKDGVVAHAK-KGS-LLIDSSTIDPNVPKQIFP----IALEKGLGFT------DAPVSG 542
G++G++A+ G L IDSST+DP ++I L++ + DAPVSG
Sbjct: 61 NGRNGLLANGGCLGPWLYIDSSTVDPQTSRKISMDISRCTLKEKKAYAEKPMMLDAPVSG 120
Query: 543 GVMGAQNATLAFM 581
GV A+ L FM
Sbjct: 121 GVPAAEAGKLTFM 133
>06_01_1052 +
8312752-8312862,8312969-8313041,8313285-8313362,
8313443-8313523,8313706-8313779,8313865-8313919,
8314031-8314079,8314222-8314359,8314455-8314536,
8315131-8315209,8315357-8315400,8315479-8315673,
8316110-8316185,8317427-8317507,8317623-8317703,
8318128-8318204,8318402-8318499,8318672-8318809,
8319397-8319478,8319564-8319642,8319885-8319931,
8320014-8320228,8320330-8320450,8320529-8320648,
8320731-8320849,8320964-8321036,8321112-8321231,
8321538-8321606,8321756-8321926,8322004-8322051,
8322192-8322333,8323244-8323341,8323684-8323828,
8323928-8324013,8324112-8324222,8324456-8324530,
8324836-8324901,8325036-8325224,8325315-8325425,
8326616-8326696,8327192-8327371
Length = 1385
Score = 52.4 bits (120), Expect = 5e-07
Identities = 45/129 (34%), Positives = 61/129 (47%), Gaps = 3/129 (2%)
Frame = +3
Query: 195 GLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTS 374
GLG MG MA++L+K GF+V YD K L G +S I+ +
Sbjct: 330 GLGAMGFGMASHLLKSGFSVIAYDVYKPTLARFTDLGGLTKDS-PEEVSKDVEILVIMVA 388
Query: 375 NKVVLD-VYLGKDGVVAHAKKGSLLIDSSTIDPN-VPKQIFPIALE-KGLGFTDAPVSGG 545
N+V + V G G V+ G+ +I SST+ P V K + E + + DAPVSGG
Sbjct: 389 NEVQAENVLYGNAGAVSVMAAGTSIILSSTVSPGFVIKLKERLEAECRDIKLVDAPVSGG 448
Query: 546 VMGAQNATL 572
V A TL
Sbjct: 449 VKRAAEGTL 457
>05_07_0134 - 27911920-27912762
Length = 280
Score = 50.4 bits (115), Expect = 2e-06
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Frame = +3
Query: 219 MAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTSNKVVLDVY 398
MAA L+ GF V Y + A G + A S +++ + V V
Sbjct: 1 MAARLLAAGFAVTAYARTPAKAEALVAAGASLAGSPAAVAAACDVVFTMVGNPGDVRAVV 60
Query: 399 L-GKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTDAPVSGGVMGAQNATLA 575
L GV+A + G +L+D ++ P++ +++ A G D+PVSGG +GA++ LA
Sbjct: 61 LDAASGVLAGLRPGGVLVDCTSSSPSLAREVAAAARAAGCYAVDSPVSGGDVGARDGALA 120
Query: 576 FM 581
+
Sbjct: 121 LL 122
>02_04_0261 +
21363787-21363891,21364185-21364286,21365854-21365964,
21366233-21366334,21366901-21367016,21367180-21367258,
21367347-21367517,21367617-21367712
Length = 293
Score = 28.3 bits (60), Expect(2) = 0.069
Identities = 13/20 (65%), Positives = 15/20 (75%)
Frame = +3
Query: 195 GLGNMGGFMAANLVKKGFTV 254
GLG MG MAANL++ GF V
Sbjct: 7 GLGIMGKAMAANLLRHGFRV 26
Score = 25.8 bits (54), Expect(2) = 0.069
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 375 NKVVLDVYLGKDGVVAHAKKGSLLIDSSTID 467
N+ + V KDGV+ +G +D ST+D
Sbjct: 30 NRTLSKVVFDKDGVLEQIGEGKGYVDMSTVD 60
>06_01_0080 + 644021-645463
Length = 480
Score = 34.3 bits (75), Expect = 0.13
Identities = 34/137 (24%), Positives = 57/137 (41%), Gaps = 7/137 (5%)
Frame = +3
Query: 174 TRMWLSSGLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPAN-SIXXXXXXXX 350
TR+ L+ GL MG +A N+ +KGF + Y+ + ++ + N +
Sbjct: 4 TRIGLA-GLAVMGQNLALNIAEKGFPISVYNRTTSKVDETVQRAKVEGNLPVYGFHDPAS 62
Query: 351 XXXSILTSNKVVLDVYLGKD------GVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKG 512
SI V++ V G + AH ++G +ID ++ E+G
Sbjct: 63 FVNSIQKPRVVIMLVKAGAPVDQTIATLAAHLEQGDCIIDGGNEWYENTERREKAMEERG 122
Query: 513 LGFTDAPVSGGVMGAQN 563
L + VSGG GA+N
Sbjct: 123 LLYLGMGVSGGEEGARN 139
>01_05_0431 -
22084474-22084635,22084740-22084844,22084931-22085003,
22085109-22085179,22085429-22085548,22085631-22085715,
22085812-22085867,22085978-22086053,22086546-22086611,
22086843-22087060
Length = 343
Score = 34.3 bits (75), Expect = 0.13
Identities = 26/111 (23%), Positives = 42/111 (37%)
Frame = +3
Query: 195 GLGNMGGFMAANLVKKGFTVRGYDPSKDALNAAAKNGVTPANSIXXXXXXXXXXXSILTS 374
GLG MG MA+NL+ G V ++ ++ + G S ++L
Sbjct: 57 GLGIMGAPMASNLINAGCDVTVWNRTRSKCDPLLSLGAKYEPSPADVASSCDVTFAMLAD 116
Query: 375 NKVVLDVYLGKDGVVAHAKKGSLLIDSSTIDPNVPKQIFPIALEKGLGFTD 527
+ ++V G +G G +D ST+D K I G F +
Sbjct: 117 PESAVEVACGANGAAQGMAPGKGYVDVSTVDAATSKLIGKHITSTGASFLE 167
>02_02_0184 -
7581345-7581769,7581880-7582296,7582891-7583661,
7583894-7584437,7584794-7584961,7585019-7585101,
7585190-7585631
Length = 949
Score = 29.5 bits (63), Expect = 3.7
Identities = 12/23 (52%), Positives = 16/23 (69%)
Frame = +3
Query: 219 MAANLVKKGFTVRGYDPSKDALN 287
+A L+K+G RGYD SKD+ N
Sbjct: 251 VARRLLKQGLPFRGYDESKDSYN 273
>10_01_0244 +
2549102-2549158,2549205-2549334,2549422-2549559,
2550078-2550205,2550346-2550396
Length = 167
Score = 29.1 bits (62), Expect = 4.9
Identities = 11/42 (26%), Positives = 23/42 (54%)
Frame = -3
Query: 635 ITLRRGRDLSKSSLRPPAHEGQGSVLSTHDSSRYRCICESQP 510
+ L+ DL K+ ++ HE + S++ + S +C+ E +P
Sbjct: 56 LVLKDNPDLEKTGIKRKIHEHKESLMMDDNESLQKCVSEDKP 97
>06_02_0156 - 12395660-12396220,12396278-12396298
Length = 193
Score = 29.1 bits (62), Expect = 4.9
Identities = 13/37 (35%), Positives = 20/37 (54%), Gaps = 3/37 (8%)
Frame = -1
Query: 253 TVKPFLTKFAAMNPPMFPRPE---ESHILVGVRTIRP 152
+ +P T+ PP+ P P+ SH L+G +TI P
Sbjct: 157 STQPLATQLITSQPPLIPPPQTQPSSHQLIGSQTIGP 193
>06_02_0014 + 10585888-10586422,10586621-10586652,10587127-10587216
Length = 218
Score = 28.7 bits (61), Expect = 6.5
Identities = 16/40 (40%), Positives = 18/40 (45%)
Frame = -2
Query: 432 FSHEPQRHLCPGTRRARLYCWSIWKRPRRLHQRLQQWSWL 313
F E + G A L WS W R R +H R Q W WL
Sbjct: 68 FMQEEGGKVFTGRMCATLPWWSTW-RGRWIHLRDQPWLWL 106
>03_02_0338 +
7614199-7614450,7614518-7614703,7614815-7614927,
7615023-7615206,7615343-7615440,7616113-7616578,
7617342-7617683
Length = 546
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -2
Query: 726 PFPVMPINMLLVSLATCPEPDLSAVELFSSHHFEERKG 613
PFP P N LA P P S F HH G
Sbjct: 510 PFPATPFNATTAGLAPAPAP--SPAHFFGRHHRHHSHG 545
>07_03_1769 +
29377784-29377878,29377993-29378180,29378340-29378472,
29378580-29378715,29378996-29379072,29379162-29380830,
29380935-29381018,29381120-29381224,29381302-29381358
Length = 847
Score = 28.3 bits (60), Expect = 8.6
Identities = 14/31 (45%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = -1
Query: 220 MNPPMFPRPEESHILVGVR---TIRPSGGCV 137
MNPP PRP+ S + VGV+ T+R + G +
Sbjct: 744 MNPPPVPRPKYSILQVGVQDRSTVRTAPGLI 774
>03_01_0417 - 3197956-3198438,3198550-3200001,3200116-3200277,
3200351-3201133
Length = 959
Score = 28.3 bits (60), Expect = 8.6
Identities = 16/63 (25%), Positives = 26/63 (41%)
Frame = -3
Query: 362 GNDHVDSINGCSNGVGWRHSVLGRCVQCIFGRIVAANCETLFNQVRSHESSHVSEARGKP 183
G++HV+ + N V W L Q A + E + Q ++ E HV + +P
Sbjct: 864 GSEHVNGLPSTENEVEWSEKTLNEEHQPCSSAAEADSPEFMLKQ-KAEEEEHVEQDGVQP 922
Query: 182 HSC 174
C
Sbjct: 923 EQC 925
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,391,261
Number of Sequences: 37544
Number of extensions: 666188
Number of successful extensions: 1812
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1736
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1808
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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