Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_O07
         (866 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_06_0124 - 26692731-26697046,26698749-26698827,26698899-266989...    31   0.90 
03_05_0373 + 23581812-23583293                                         30   2.1  
12_02_1035 - 25570009-25571241,25571940-25573709,25573797-255751...    29   4.8  

>01_06_0124 -
           26692731-26697046,26698749-26698827,26698899-26698955,
           26699321-26699416
          Length = 1515

 Score = 31.5 bits (68), Expect = 0.90
 Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
 Frame = +1

Query: 457 EKNATALR-EKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRLRE 615
           EKNA  L+ ++L+A ++N   E ++   +VS+ +++ NE+L  KI    R+L E
Sbjct: 832 EKNAALLQVQQLEANLKNLESELEQKQSQVSA-LEQANEELREKISSLERQLEE 884


>03_05_0373 + 23581812-23583293
          Length = 493

 Score = 30.3 bits (65), Expect = 2.1
 Identities = 14/26 (53%), Positives = 15/26 (57%)
 Frame = -3

Query: 456 DVQGGPCGAPRPCARCSASTVPKPPW 379
           D  GG   A    +RCSAST PK PW
Sbjct: 53  DGAGGYGSAASSPSRCSASTPPKSPW 78


>12_02_1035 -
           25570009-25571241,25571940-25573709,25573797-25575118,
           25575208-25575555,25576540-25576633
          Length = 1588

 Score = 29.1 bits (62), Expect = 4.8
 Identities = 15/46 (32%), Positives = 27/46 (58%)
 Frame = +1

Query: 481 EKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRLREE 618
           EKLQ  + +  QE+Q+L KK+SS V E +++   ++      L ++
Sbjct: 153 EKLQKEISSLSQENQELKKKISS-VLENSDRAESEVASLKEALAQQ 197


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,202,396
Number of Sequences: 37544
Number of extensions: 299526
Number of successful extensions: 1361
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1361
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2432722788
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)