Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_O07
(866 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical ... 37 0.021
U49954-1|AAA93426.1| 388|Caenorhabditis elegans Hypothetical pr... 32 0.61
U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical pr... 31 0.81
AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical ... 31 0.81
AF036699-6|AAB88357.1| 170|Caenorhabditis elegans Hypothetical ... 31 1.4
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 30 2.5
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 30 2.5
U46669-4|AAQ65208.1| 557|Caenorhabditis elegans Hypothetical pr... 30 2.5
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 30 2.5
D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein. 30 2.5
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 30 2.5
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 30 2.5
AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical ... 29 3.3
AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical ... 29 3.3
AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical ... 29 3.3
AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical ... 29 3.3
AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical ... 29 3.3
AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical ... 29 3.3
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 28 7.5
Z35663-13|CAA84729.1| 234|Caenorhabditis elegans Hypothetical p... 28 9.9
AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical ... 28 9.9
>AF024502-4|AAB70374.1| 675|Caenorhabditis elegans Hypothetical
protein M151.2 protein.
Length = 675
Score = 36.7 bits (81), Expect = 0.021
Identities = 29/97 (29%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
Frame = +3
Query: 171 RDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQ 350
R D K++E++ + L++Q N K+KD + K+ K + + A A+ LQ
Sbjct: 105 RKKDDKLKELENNAEALKTQLQEQTNDAKKAKD--ELQKSLKSAAARATEATTAVAE-LQ 161
Query: 351 GALGDANGK-------AKEALEQSRQNIERTAEELRK 440
L + AKEAL +QN ER EL+K
Sbjct: 162 AKLQTVEKEHKKEIEDAKEALAAEKQNSEREKMELKK 198
>U49954-1|AAA93426.1| 388|Caenorhabditis elegans Hypothetical
protein Y102E9.2 protein.
Length = 388
Score = 31.9 bits (69), Expect = 0.61
Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 451 NVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAP----KIXGRLRRLREE 618
N+E+ + E+L + +T L K V+ N Q+ EK +I + RRL E+
Sbjct: 315 NMEQKFVPIDEELTITLTSTNDAIDNLFKNVTHNNQQEYEKRKADKFEQIEKKKRRLNED 374
Query: 619 HPGGDQEDPG 648
G D E PG
Sbjct: 375 INGDDGEGPG 384
>U00040-1|AAA50664.3| 1770|Caenorhabditis elegans Hypothetical
protein C18H2.1 protein.
Length = 1770
Score = 31.5 bits (68), Expect = 0.81
Identities = 18/58 (31%), Positives = 28/58 (48%)
Frame = +3
Query: 102 YIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTKSKDAQ 275
Y K V C++ + + D +F KDI+ K+ HKTLE + + K +D Q
Sbjct: 572 YFKNNKPKVFLECVSRLRKTAI--DGENFVKDIQKTYKKSHKTLESDSSPVLKLEDPQ 627
>AC006834-9|AAL11490.1| 447|Caenorhabditis elegans Hypothetical
protein ZK973.11 protein.
Length = 447
Score = 31.5 bits (68), Expect = 0.81
Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 1/37 (2%)
Frame = +3
Query: 213 KEFHKTLEQQFNSLTKSKDAQD-FSKAWKDGSESVLQ 320
+EFHKT E+ L K D + F AW DGS+ Q
Sbjct: 266 REFHKTAEEASKELRKHPDLWNRFQFAWLDGSDLASQ 302
>AF036699-6|AAB88357.1| 170|Caenorhabditis elegans Hypothetical
protein F58F6.3 protein.
Length = 170
Score = 30.7 bits (66), Expect = 1.4
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 447 GGPCGAPRPCARCSASTVPKPPWPCRSRLRALPGDSW 337
GG GA A C A++ P PP+ S RA+P W
Sbjct: 96 GGEGGAKNNRAVCLAASRPPPPYLIYSGRRAMPSAEW 132
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical protein
K08C7.3b protein.
Length = 3672
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +1
Query: 496 AVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRLREE 618
++ VQE +KL ++ +N++ET K++ +I G+ + E+
Sbjct: 2584 SIDEKVQEVEKLKAEIDANIEETRAKIS-EIAGKAEEITEK 2623
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical protein
K08C7.3a protein.
Length = 3704
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +1
Query: 496 AVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRLREE 618
++ VQE +KL ++ +N++ET K++ +I G+ + E+
Sbjct: 2584 SIDEKVQEVEKLKAEIDANIEETRAKIS-EIAGKAEEITEK 2623
>U46669-4|AAQ65208.1| 557|Caenorhabditis elegans Hypothetical
protein C41G11.4c protein.
Length = 557
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/49 (30%), Positives = 27/49 (55%)
Frame = +1
Query: 541 VSSNVQETNEKLAPKIXGRLRRLREEHPGGDQEDPGXRQRXAVSVDIEL 687
+ SNV + ++ L ++ + +RL+ P GD E +R A SVD+ +
Sbjct: 310 IESNVTQESDNLMARVPSKTKRLQNIAPEGDME-----RRRAASVDVPM 353
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 29.9 bits (64), Expect = 2.5
Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)
Frame = +3
Query: 156 GAMVRRDAPDFFKDIEHHTKEFH--KTLEQQFNSLTKSKDAQDFSKAWKDGSES 311
G +A ++F D++HHT F T + + +D D K W SE+
Sbjct: 519 GTSTSNEAREYFSDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDERKEWIRRSEN 572
>D83173-1|BAA11828.1| 1518|Caenorhabditis elegans laminin A protein.
Length = 1518
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +1
Query: 496 AVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRLREE 618
++ VQE +KL ++ +N++ET K++ +I G+ + E+
Sbjct: 398 SIDEKVQEVEKLKAEIDANIEETRAKIS-EIAGKAEEITEK 437
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +1
Query: 496 AVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRLREE 618
++ VQE +KL ++ +N++ET K++ +I G+ + E+
Sbjct: 2584 SIDEKVQEVEKLKAEIDANIEETRAKIS-EIAGKAEEITEK 2623
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 29.9 bits (64), Expect = 2.5
Identities = 12/41 (29%), Positives = 26/41 (63%)
Frame = +1
Query: 496 AVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRLREE 618
++ VQE +KL ++ +N++ET K++ +I G+ + E+
Sbjct: 2584 SIDEKVQEVEKLKAEIDANIEETRAKIS-EIAGKAEEITEK 2623
>AF038606-4|AAB92026.1| 331|Caenorhabditis elegans Hypothetical
protein C04C3.5a protein.
Length = 331
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 487 LQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRLRE 615
LQA VQN QE+++L+ K+ +NV +L KI + R +
Sbjct: 110 LQATVQNIAQETEQLSNKL-NNVASDEAELDEKIERKKREYEQ 151
>AF038606-3|AAX55701.1| 393|Caenorhabditis elegans Hypothetical
protein C04C3.5c protein.
Length = 393
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 487 LQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRLRE 615
LQA VQN QE+++L+ K+ +NV +L KI + R +
Sbjct: 172 LQATVQNIAQETEQLSNKL-NNVASDEAELDEKIERKKREYEQ 213
>AF038606-2|AAX55700.1| 404|Caenorhabditis elegans Hypothetical
protein C04C3.5b protein.
Length = 404
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 487 LQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRLRE 615
LQA VQN QE+++L+ K+ +NV +L KI + R +
Sbjct: 183 LQATVQNIAQETEQLSNKL-NNVASDEAELDEKIERKKREYEQ 224
>AB182367-3|BAD23998.1| 331|Caenorhabditis elegans hypothetical
protein protein.
Length = 331
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 487 LQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRLRE 615
LQA VQN QE+++L+ K+ +NV +L KI + R +
Sbjct: 110 LQATVQNIAQETEQLSNKL-NNVASDEAELDEKIERKKREYEQ 151
>AB182367-2|BAD23997.1| 393|Caenorhabditis elegans hypothetical
protein protein.
Length = 393
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 487 LQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRLRE 615
LQA VQN QE+++L+ K+ +NV +L KI + R +
Sbjct: 172 LQATVQNIAQETEQLSNKL-NNVASDEAELDEKIERKKREYEQ 213
>AB182367-1|BAD23996.1| 404|Caenorhabditis elegans hypothetical
protein protein.
Length = 404
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/43 (37%), Positives = 25/43 (58%)
Frame = +1
Query: 487 LQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIXGRLRRLRE 615
LQA VQN QE+++L+ K+ +NV +L KI + R +
Sbjct: 183 LQATVQNIAQETEQLSNKL-NNVASDEAELDEKIERKKREYEQ 224
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 28.3 bits (60), Expect = 7.5
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = -3
Query: 447 GGPCGAPRPCARCSASTVPKPP 382
GG CG P PC + + V PP
Sbjct: 65 GGGCGGPAPCGGAAPAYVAPPP 86
>Z35663-13|CAA84729.1| 234|Caenorhabditis elegans Hypothetical
protein T04A8.10 protein.
Length = 234
Score = 27.9 bits (59), Expect = 9.9
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +1
Query: 481 EKLQAAVQNTVQ----ESQKLAKKVSSNVQETNEKLAPKIXGRLRRLREEHPGGDQEDPG 648
E+L+AAVQ ++ + Q A K ++++ EK + R RRL+ E P +++D G
Sbjct: 160 EELEAAVQRELELERIDEQMAALKKLNDMEIQKEKRLNQ--ARERRLKREEPEEEEDDDG 217
>AC006661-7|AAF39888.2| 1427|Caenorhabditis elegans Hypothetical
protein H20J04.2 protein.
Length = 1427
Score = 27.9 bits (59), Expect = 9.9
Identities = 23/68 (33%), Positives = 31/68 (45%)
Frame = +3
Query: 216 EFHKTLEQQFNSLTKSKDAQDFSKAWKDGSESVLQQLNAFAKSLQGALGDANGKAKEALE 395
+F LEQ+ N L + K Q KAW G E + NA L+ A A+G A + E
Sbjct: 680 KFRGHLEQRQNELVELKREQKKLKAWDVGQEG---EANAARLLLELAPAGASG-APDVKE 735
Query: 396 QSRQNIER 419
Q + R
Sbjct: 736 QKEPPVVR 743
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,759,235
Number of Sequences: 27780
Number of extensions: 233676
Number of successful extensions: 1066
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1066
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2171433726
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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