Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_O05
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_03_0024 + 13843517-13843620,13846424-13846580,13846667-13846816     30   2.2  
06_01_0351 + 2537022-2538281                                           29   6.7  

>03_03_0024 + 13843517-13843620,13846424-13846580,13846667-13846816
          Length = 136

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
 Frame = +3

Query: 378 DDITKAAKCAKKIYKRH-RFDAWYGWKNHCQGLPGLI 485
           D +   A C   +YK   +FD+  GW    +GLPG I
Sbjct: 48  DGVYNCAGCGTPLYKSTTKFDSGCGWPAFFEGLPGAI 84


>06_01_0351 + 2537022-2538281
          Length = 419

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/25 (40%), Positives = 14/25 (56%)
 Frame = +2

Query: 419 QTSPLRCLVRLEEPLPGAPWPDISS 493
           Q  P + ++   EP  G PWPD+ S
Sbjct: 25  QPPPTQAIMATPEPCSGRPWPDLPS 49


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,088,339
Number of Sequences: 37544
Number of extensions: 274292
Number of successful extensions: 696
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 683
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 696
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)