SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_O04
         (837 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein...    57   1e-08
U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein ...    57   1e-08
U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein ...    57   1e-08
U50301-5|AAT81199.1|  365|Caenorhabditis elegans Serpin protein ...    57   1e-08
AY525085-1|AAS13533.1|  365|Caenorhabditis elegans serine or cys...    57   1e-08
AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or cys...    57   1e-08
AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or cys...    57   1e-08
AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or cys...    57   1e-08
AY525078-1|AAS13527.1|  366|Caenorhabditis elegans serine or cys...    55   5e-08
AF026209-12|AAB71272.1|  366|Caenorhabditis elegans Serpin prote...    55   5e-08
AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or cys...    53   3e-07
AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin prote...    53   3e-07
AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or cys...    33   0.25 
AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protei...    33   0.25 
AL132949-21|CAB61098.1|  866|Caenorhabditis elegans Hypothetical...    31   1.0  
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p...    30   1.8  
Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical pr...    30   2.3  
AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interfere...    30   2.3  
Z78542-6|CAB01749.2|  695|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z83103-9|CAI79157.1|  376|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z68752-4|CAA92983.1|  447|Caenorhabditis elegans Hypothetical pr...    28   7.2  
Z93383-11|CAI58635.1|  279|Caenorhabditis elegans Hypothetical p...    28   9.5  
U88311-6|AAB42347.1|  382|Caenorhabditis elegans Hypothetical pr...    28   9.5  

>U97008-19|AAB52318.2|  375|Caenorhabditis elegans Serpin protein 6
           protein.
          Length = 375

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 23/61 (37%), Positives = 38/61 (62%)
 Frame = +3

Query: 477 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFXGSM 656
           ++N+    ++F     +A++IN++V ENT   IK ++NPDS+S    AVL NA YF  + 
Sbjct: 118 LYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANW 177

Query: 657 E 659
           +
Sbjct: 178 Q 178



 Score = 32.7 bits (71), Expect = 0.33
 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +1

Query: 655 WSSKFDERLTSDRDFYVSKDQTIKVPMMYKR-GDYKYGESAVLNXQLIEIPYKGDQSSLI 831
           W +KF +  T  R+F+ S++   +   ++ R  + KY E+     Q++ +PYK    +L 
Sbjct: 177 WQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENG--QFQVLSLPYKDTSFALS 234

Query: 832 V 834
           +
Sbjct: 235 I 235


>U50301-7|AAB37055.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform a protein.
          Length = 366

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
 Frame = +3

Query: 450 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 620
           +I QS+  DV   +N+   ++DF      A++IN++V ENT + IK ++  DS++S   A
Sbjct: 97  KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156

Query: 621 VLVNAIYF 644
           VL NA+YF
Sbjct: 157 VLTNALYF 164


>U50301-6|AAT81198.1|  366|Caenorhabditis elegans Serpin protein 7,
           isoform b protein.
          Length = 366

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
 Frame = +3

Query: 450 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 620
           +I QS+  DV   +N+   ++DF      A++IN++V ENT + IK ++  DS++S   A
Sbjct: 97  KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156

Query: 621 VLVNAIYF 644
           VL NA+YF
Sbjct: 157 VLTNALYF 164


>U50301-5|AAT81199.1|  365|Caenorhabditis elegans Serpin protein 7,
           isoform c protein.
          Length = 365

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
 Frame = +3

Query: 450 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 620
           +I QS+  DV   +N+   ++DF      A++IN++V ENT + IK ++  DS++S   A
Sbjct: 97  KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156

Query: 621 VLVNAIYF 644
           VL NA+YF
Sbjct: 157 VLTNALYF 164


>AY525085-1|AAS13533.1|  365|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 365

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
 Frame = +3

Query: 450 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 620
           +I QS+  DV   +N+   ++DF      A++IN++V ENT + IK ++  DS++S   A
Sbjct: 97  KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156

Query: 621 VLVNAIYF 644
           VL NA+YF
Sbjct: 157 VLTNALYF 164


>AY525084-1|AAS13532.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
 Frame = +3

Query: 450 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 620
           +I QS+  DV   +N+   ++DF      A++IN++V ENT + IK ++  DS++S   A
Sbjct: 97  KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156

Query: 621 VLVNAIYF 644
           VL NA+YF
Sbjct: 157 VLTNALYF 164


>AY525083-1|AAS13531.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
 Frame = +3

Query: 450 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 620
           +I QS+  DV   +N+   ++DF      A++IN++V ENT + IK ++  DS++S   A
Sbjct: 97  KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156

Query: 621 VLVNAIYF 644
           VL NA+YF
Sbjct: 157 VLTNALYF 164


>AY525082-1|AAS13530.1|  375|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 375

 Score = 57.2 bits (132), Expect = 1e-08
 Identities = 23/61 (37%), Positives = 38/61 (62%)
 Frame = +3

Query: 477 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFXGSM 656
           ++N+    ++F     +A++IN++V ENT   IK ++NPDS+S    AVL NA YF  + 
Sbjct: 118 LYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANW 177

Query: 657 E 659
           +
Sbjct: 178 Q 178



 Score = 32.7 bits (71), Expect = 0.33
 Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
 Frame = +1

Query: 655 WSSKFDERLTSDRDFYVSKDQTIKVPMMYKR-GDYKYGESAVLNXQLIEIPYKGDQSSLI 831
           W +KF +  T  R+F+ S++   +   ++ R  + KY E+     Q++ +PYK    +L 
Sbjct: 177 WQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENG--QFQVLSLPYKDTSFALS 234

Query: 832 V 834
           +
Sbjct: 235 I 235


>AY525078-1|AAS13527.1|  366|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 366

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 23/57 (40%), Positives = 38/57 (66%)
 Frame = +3

Query: 480 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFXG 650
           +N++   IDF K+  AAK +N ++ E+T  +I D++ PD+L     A+L+NAI+F G
Sbjct: 116 YNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVD-AILINAIFFQG 171


>AF026209-12|AAB71272.1|  366|Caenorhabditis elegans Serpin protein
           1 protein.
          Length = 366

 Score = 55.2 bits (127), Expect = 5e-08
 Identities = 23/57 (40%), Positives = 38/57 (66%)
 Frame = +3

Query: 480 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFXG 650
           +N++   IDF K+  AAK +N ++ E+T  +I D++ PD+L     A+L+NAI+F G
Sbjct: 116 YNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVD-AILINAIFFQG 171


>AY525079-1|AAS13528.1|  359|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 359

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 25/56 (44%), Positives = 41/56 (73%)
 Frame = +3

Query: 477 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYF 644
           ++ +  +++DFS+   AAK++N +VE +TN +IKDL+  DS ++A  A LVNA+YF
Sbjct: 105 LYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNA-FAFLVNAMYF 159



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = +2

Query: 227 SIVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVEL 403
           S+VLS  S+   LA +   + G T +EL   +G      I  EF+     +     GVE 
Sbjct: 24  SVVLSPLSISLGLALIHAGACGSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVET 80

Query: 404 KMANKVYVHDGGKLDENF 457
           K+ N+V+V+    + +++
Sbjct: 81  KIVNRVFVNQAYTIHQDY 98



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 14/60 (23%), Positives = 33/60 (55%)
 Frame = +1

Query: 655 WSSKFDERLTSDRDFYVSKDQTIKVPMMYKRGDYKYGESAVLNXQLIEIPYKGDQSSLIV 834
           W SKF +  T+ R+F+ S+ ++ ++P +    +++     VL  Q++ + Y   + +L +
Sbjct: 163 WQSKFAKESTTGREFFTSEAESRQIPFLTDVDEHRDYTEDVL-FQVLSLKYADPKFTLAI 221


>AF026209-15|AAB71270.1|  359|Caenorhabditis elegans Serpin protein
           2 protein.
          Length = 359

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 25/56 (44%), Positives = 41/56 (73%)
 Frame = +3

Query: 477 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYF 644
           ++ +  +++DFS+   AAK++N +VE +TN +IKDL+  DS ++A  A LVNA+YF
Sbjct: 105 LYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNA-FAFLVNAMYF 159



 Score = 31.5 bits (68), Expect = 0.77
 Identities = 14/60 (23%), Positives = 34/60 (56%)
 Frame = +1

Query: 655 WSSKFDERLTSDRDFYVSKDQTIKVPMMYKRGDYKYGESAVLNXQLIEIPYKGDQSSLIV 834
           W SKF +  T+ R+F+ S+ ++ ++P + +  +++     VL  Q++ + Y   + +L +
Sbjct: 163 WQSKFAKESTTGREFFTSEAESRQIPFLTELDEHRDYTEDVL-FQVLSLKYADPKFTLAI 221



 Score = 30.7 bits (66), Expect = 1.3
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
 Frame = +2

Query: 227 SIVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVEL 403
           S+VLS  S+   LA +   + G T +EL   +G      I  EF+     +     GVE 
Sbjct: 24  SVVLSPLSISLGLALIHAGACGSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVET 80

Query: 404 KMANKVYVHDGGKLDENF 457
           K+ N+V+V+    + +++
Sbjct: 81  KIVNRVFVNQAYTIHQDY 98


>AY525080-1|AAS13529.1|  362|Caenorhabditis elegans serine or
           cysteine protease inhibitorprotein.
          Length = 362

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = +2

Query: 224 KSIVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS-IKG 394
           +S+V S  S+   L+ +     G + +++   +  G  D+  +   F+  S+++++  KG
Sbjct: 22  ESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNGTKG 80

Query: 395 VELKMANKVYVHDGGKLDENF 457
           VE+ +ANKVY+  G  ++  F
Sbjct: 81  VEVYLANKVYLKKGFTVNPTF 101


>AC087794-5|AAM48555.1|  362|Caenorhabditis elegans Serpin protein 3
           protein.
          Length = 362

 Score = 33.1 bits (72), Expect = 0.25
 Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
 Frame = +2

Query: 224 KSIVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS-IKG 394
           +S+V S  S+   L+ +     G + +++   +  G  D+  +   F+  S+++++  KG
Sbjct: 22  ESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNGTKG 80

Query: 395 VELKMANKVYVHDGGKLDENF 457
           VE+ +ANKVY+  G  ++  F
Sbjct: 81  VEVYLANKVYLKKGFTVNPTF 101


>AL132949-21|CAB61098.1|  866|Caenorhabditis elegans Hypothetical
           protein Y53F4B.24 protein.
          Length = 866

 Score = 31.1 bits (67), Expect = 1.0
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 658 SSKFDERLTSDRDFYVSKDQTIKVPMMYKRGDYKYGESAV 777
           S +FD+ L +D   Y +KD+     ++  R D++Y   A+
Sbjct: 648 SGQFDQTLYNDLTLYTAKDEETDETLVSNRSDFEYTNDAI 687



 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/40 (30%), Positives = 22/40 (55%)
 Frame = +1

Query: 658 SSKFDERLTSDRDFYVSKDQTIKVPMMYKRGDYKYGESAV 777
           S +FD+ L +D   Y +KD+     ++  R D++Y   A+
Sbjct: 140 SGQFDQILYNDLTLYTAKDEETDETLVSNRSDFEYTNDAI 179


>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
           protein R05D3.1 protein.
          Length = 1053

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
 Frame = +2

Query: 284 SDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENFAV 463
           SD + H    K  G  DDDAIR  F     D R  K    +  N++   D GK + ++  
Sbjct: 531 SDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDER--KEWIRRSENEITNEDDGKTEISYQE 588

Query: 464 VSRGRL-QFG 490
              G+L QFG
Sbjct: 589 FVDGQLMQFG 598


>Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical protein
            K08H10.7 protein.
          Length = 1020

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
 Frame = +3

Query: 417  KYTFMMVE--N*TRILQSFPGD--VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDL 584
            KYTF++++  + TR+L+    D  V N D+     ++  VA  ++  W E+   ++   +
Sbjct: 838  KYTFIVIQKRHNTRLLRRMEKDKPVVNKDLTP---AETDVAVAAVKQWEEDMKESKETGI 894

Query: 585  VNPDS 599
            VNP S
Sbjct: 895  VNPSS 899


>AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interference
            promoting factorRDE-1 protein.
          Length = 1020

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
 Frame = +3

Query: 417  KYTFMMVE--N*TRILQSFPGD--VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDL 584
            KYTF++++  + TR+L+    D  V N D+     ++  VA  ++  W E+   ++   +
Sbjct: 838  KYTFIVIQKRHNTRLLRRMEKDKPVVNKDLTP---AETDVAVAAVKQWEEDMKESKETGI 894

Query: 585  VNPDS 599
            VNP S
Sbjct: 895  VNPSS 899


>Z78542-6|CAB01749.2|  695|Caenorhabditis elegans Hypothetical
           protein F20D1.7 protein.
          Length = 695

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = +2

Query: 113 IAIAAMAAVTNLSNVLKN-GNDNFTARMFTEVV-KNNPGKSIVLSAFSVLPPLAQLALAS 286
           +A+ ++  +    N+L+N G D+   R    V+ +NN  KSI +  F  +P L  L L+ 
Sbjct: 124 MALTSLLELDLSDNMLENLGADSIHIRSIQRVILRNNQIKSIGVHVFRYMPTLKMLDLSG 183

Query: 287 DGET 298
           +  T
Sbjct: 184 NNMT 187


>Z83103-9|CAI79157.1|  376|Caenorhabditis elegans Hypothetical
           protein D1025.10 protein.
          Length = 376

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 12/23 (52%), Positives = 13/23 (56%)
 Frame = +1

Query: 628 STPSISXGAWSSKFDERLTSDRD 696
           STP+ S   W S  DE LT D D
Sbjct: 87  STPNNSRSNWRSDMDEELTDDED 109


>Z68752-4|CAA92983.1|  447|Caenorhabditis elegans Hypothetical
           protein T12G3.4 protein.
          Length = 447

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 14/33 (42%), Positives = 18/33 (54%)
 Frame = -3

Query: 157 HIREICDGCHCRDGDSKQTNDCLHVCGLRLSNV 59
           H  ++  G H  DG  K+ N C    GLRLS+V
Sbjct: 147 HAVQLAQGNHDCDGSYKKMNLCGRPLGLRLSDV 179


>Z93383-11|CAI58635.1|  279|Caenorhabditis elegans Hypothetical
           protein F54B8.16 protein.
          Length = 279

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 14/42 (33%), Positives = 24/42 (57%)
 Frame = -1

Query: 204 TSVNILAVKLSFPFLSTLERFVTAAIAAMAIVNKQMIVFMFV 79
           TSV +  +K +F F+ TLERF++         N++ I F ++
Sbjct: 87  TSVTMGIIKGTFAFMITLERFISVFFPIHYRNNRRKIPFYWI 128


>U88311-6|AAB42347.1|  382|Caenorhabditis elegans Hypothetical
           protein C10H11.8 protein.
          Length = 382

 Score = 27.9 bits (59), Expect = 9.5
 Identities = 17/49 (34%), Positives = 22/49 (44%)
 Frame = +3

Query: 456 LQSFPGDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSL 602
           L SFPG    S V N   +   V+  S + WV +  N+    L  PD L
Sbjct: 161 LLSFPGSTVTSIVPNTHQTHLFVSTNSAHVWVWDVVNHIFMRLPMPDDL 209


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,518,436
Number of Sequences: 27780
Number of extensions: 356961
Number of successful extensions: 1150
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -