BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_O04
(837 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein... 57 1e-08
U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein ... 57 1e-08
U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein ... 57 1e-08
U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein ... 57 1e-08
AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or cys... 57 1e-08
AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or cys... 57 1e-08
AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or cys... 57 1e-08
AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or cys... 57 1e-08
AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or cys... 55 5e-08
AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin prote... 55 5e-08
AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or cys... 53 3e-07
AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin prote... 53 3e-07
AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or cys... 33 0.25
AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protei... 33 0.25
AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical... 31 1.0
L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical p... 30 1.8
Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical pr... 30 2.3
AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interfere... 30 2.3
Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical p... 28 9.5
U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical pr... 28 9.5
>U97008-19|AAB52318.2| 375|Caenorhabditis elegans Serpin protein 6
protein.
Length = 375
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +3
Query: 477 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFXGSM 656
++N+ ++F +A++IN++V ENT IK ++NPDS+S AVL NA YF +
Sbjct: 118 LYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANW 177
Query: 657 E 659
+
Sbjct: 178 Q 178
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 655 WSSKFDERLTSDRDFYVSKDQTIKVPMMYKR-GDYKYGESAVLNXQLIEIPYKGDQSSLI 831
W +KF + T R+F+ S++ + ++ R + KY E+ Q++ +PYK +L
Sbjct: 177 WQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENG--QFQVLSLPYKDTSFALS 234
Query: 832 V 834
+
Sbjct: 235 I 235
>U50301-7|AAB37055.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform a protein.
Length = 366
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +3
Query: 450 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 620
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 621 VLVNAIYF 644
VL NA+YF
Sbjct: 157 VLTNALYF 164
>U50301-6|AAT81198.1| 366|Caenorhabditis elegans Serpin protein 7,
isoform b protein.
Length = 366
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +3
Query: 450 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 620
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 621 VLVNAIYF 644
VL NA+YF
Sbjct: 157 VLTNALYF 164
>U50301-5|AAT81199.1| 365|Caenorhabditis elegans Serpin protein 7,
isoform c protein.
Length = 365
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +3
Query: 450 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 620
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 621 VLVNAIYF 644
VL NA+YF
Sbjct: 157 VLTNALYF 164
>AY525085-1|AAS13533.1| 365|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 365
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +3
Query: 450 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 620
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 621 VLVNAIYF 644
VL NA+YF
Sbjct: 157 VLTNALYF 164
>AY525084-1|AAS13532.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +3
Query: 450 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 620
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 621 VLVNAIYF 644
VL NA+YF
Sbjct: 157 VLTNALYF 164
>AY525083-1|AAS13531.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 57.2 bits (132), Expect = 1e-08
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Frame = +3
Query: 450 RILQSFPGDV---FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAA 620
+I QS+ DV +N+ ++DF A++IN++V ENT + IK ++ DS++S A
Sbjct: 97 KIKQSYLDDVKKLYNAGASSLDFDNKEATAEAINNFVRENTGDHIKKIIGSDSINSDLVA 156
Query: 621 VLVNAIYF 644
VL NA+YF
Sbjct: 157 VLTNALYF 164
>AY525082-1|AAS13530.1| 375|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 375
Score = 57.2 bits (132), Expect = 1e-08
Identities = 23/61 (37%), Positives = 38/61 (62%)
Frame = +3
Query: 477 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFXGSM 656
++N+ ++F +A++IN++V ENT IK ++NPDS+S AVL NA YF +
Sbjct: 118 LYNAGASQLNFEDQEASAEAINNFVSENTKGHIKKIINPDSISEELVAVLTNAFYFKANW 177
Query: 657 E 659
+
Sbjct: 178 Q 178
Score = 32.7 bits (71), Expect = 0.33
Identities = 16/61 (26%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Frame = +1
Query: 655 WSSKFDERLTSDRDFYVSKDQTIKVPMMYKR-GDYKYGESAVLNXQLIEIPYKGDQSSLI 831
W +KF + T R+F+ S++ + ++ R + KY E+ Q++ +PYK +L
Sbjct: 177 WQTKFKKESTYKREFFSSENSKRETEFLHSRNSNRKYSENG--QFQVLSLPYKDTSFALS 234
Query: 832 V 834
+
Sbjct: 235 I 235
>AY525078-1|AAS13527.1| 366|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 366
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/57 (40%), Positives = 38/57 (66%)
Frame = +3
Query: 480 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFXG 650
+N++ IDF K+ AAK +N ++ E+T +I D++ PD+L A+L+NAI+F G
Sbjct: 116 YNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVD-AILINAIFFQG 171
>AF026209-12|AAB71272.1| 366|Caenorhabditis elegans Serpin protein
1 protein.
Length = 366
Score = 55.2 bits (127), Expect = 5e-08
Identities = 23/57 (40%), Positives = 38/57 (66%)
Frame = +3
Query: 480 FNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYFXG 650
+N++ IDF K+ AAK +N ++ E+T +I D++ PD+L A+L+NAI+F G
Sbjct: 116 YNAETATIDFKKSQEAAKIMNQFISESTKGKIPDMIKPDNLKDVD-AILINAIFFQG 171
>AY525079-1|AAS13528.1| 359|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 359
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/56 (44%), Positives = 41/56 (73%)
Frame = +3
Query: 477 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYF 644
++ + +++DFS+ AAK++N +VE +TN +IKDL+ DS ++A A LVNA+YF
Sbjct: 105 LYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNA-FAFLVNAMYF 159
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 227 SIVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVEL 403
S+VLS S+ LA + + G T +EL +G I EF+ + GVE
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVET 80
Query: 404 KMANKVYVHDGGKLDENF 457
K+ N+V+V+ + +++
Sbjct: 81 KIVNRVFVNQAYTIHQDY 98
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/60 (23%), Positives = 33/60 (55%)
Frame = +1
Query: 655 WSSKFDERLTSDRDFYVSKDQTIKVPMMYKRGDYKYGESAVLNXQLIEIPYKGDQSSLIV 834
W SKF + T+ R+F+ S+ ++ ++P + +++ VL Q++ + Y + +L +
Sbjct: 163 WQSKFAKESTTGREFFTSEAESRQIPFLTDVDEHRDYTEDVL-FQVLSLKYADPKFTLAI 221
>AF026209-15|AAB71270.1| 359|Caenorhabditis elegans Serpin protein
2 protein.
Length = 359
Score = 52.8 bits (121), Expect = 3e-07
Identities = 25/56 (44%), Positives = 41/56 (73%)
Frame = +3
Query: 477 VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSLSSATAAVLVNAIYF 644
++ + +++DFS+ AAK++N +VE +TN +IKDL+ DS ++A A LVNA+YF
Sbjct: 105 LYKASGESLDFSQTEQAAKTMNTFVENHTNGKIKDLIPADSANNA-FAFLVNAMYF 159
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/60 (23%), Positives = 34/60 (56%)
Frame = +1
Query: 655 WSSKFDERLTSDRDFYVSKDQTIKVPMMYKRGDYKYGESAVLNXQLIEIPYKGDQSSLIV 834
W SKF + T+ R+F+ S+ ++ ++P + + +++ VL Q++ + Y + +L +
Sbjct: 163 WQSKFAKESTTGREFFTSEAESRQIPFLTELDEHRDYTEDVL-FQVLSLKYADPKFTLAI 221
Score = 30.7 bits (66), Expect = 1.3
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +2
Query: 227 SIVLSAFSVLPPLAQLALASDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSI-KGVEL 403
S+VLS S+ LA + + G T +EL +G I EF+ + GVE
Sbjct: 24 SVVLSPLSISLGLALIHAGACGSTQKELEDVLG---GSRIFEEFSGLMEAVGDTDNGVET 80
Query: 404 KMANKVYVHDGGKLDENF 457
K+ N+V+V+ + +++
Sbjct: 81 KIVNRVFVNQAYTIHQDY 98
>AY525080-1|AAS13529.1| 362|Caenorhabditis elegans serine or
cysteine protease inhibitorprotein.
Length = 362
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +2
Query: 224 KSIVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS-IKG 394
+S+V S S+ L+ + G + +++ + G D+ + F+ S+++++ KG
Sbjct: 22 ESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNGTKG 80
Query: 395 VELKMANKVYVHDGGKLDENF 457
VE+ +ANKVY+ G ++ F
Sbjct: 81 VEVYLANKVYLKKGFTVNPTF 101
>AC087794-5|AAM48555.1| 362|Caenorhabditis elegans Serpin protein 3
protein.
Length = 362
Score = 33.1 bits (72), Expect = 0.25
Identities = 21/81 (25%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Frame = +2
Query: 224 KSIVLSAFSVLPPLAQLALASDGETHEELLKAI--GFPDDDAIRTEFASKSRDLRS-IKG 394
+S+V S S+ L+ + G + +++ + G D+ + F+ S+++++ KG
Sbjct: 22 ESLVFSPLSIALVLSLVHTGVRGSSRDQIRNTLLSGATDEQLVE-HFSFVSKEVKNGTKG 80
Query: 395 VELKMANKVYVHDGGKLDENF 457
VE+ +ANKVY+ G ++ F
Sbjct: 81 VEVYLANKVYLKKGFTVNPTF 101
>AL132949-21|CAB61098.1| 866|Caenorhabditis elegans Hypothetical
protein Y53F4B.24 protein.
Length = 866
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 658 SSKFDERLTSDRDFYVSKDQTIKVPMMYKRGDYKYGESAV 777
S +FD+ L +D Y +KD+ ++ R D++Y A+
Sbjct: 648 SGQFDQTLYNDLTLYTAKDEETDETLVSNRSDFEYTNDAI 687
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/40 (30%), Positives = 22/40 (55%)
Frame = +1
Query: 658 SSKFDERLTSDRDFYVSKDQTIKVPMMYKRGDYKYGESAV 777
S +FD+ L +D Y +KD+ ++ R D++Y A+
Sbjct: 140 SGQFDQILYNDLTLYTAKDEETDETLVSNRSDFEYTNDAI 179
>L07144-12|AAM54162.1| 1053|Caenorhabditis elegans Hypothetical
protein R05D3.1 protein.
Length = 1053
Score = 30.3 bits (65), Expect = 1.8
Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 1/70 (1%)
Frame = +2
Query: 284 SDGETHEELLKAIGFPDDDAIRTEFASKSRDLRSIKGVELKMANKVYVHDGGKLDENFAV 463
SD + H K G DDDAIR F D R K + N++ D GK + ++
Sbjct: 531 SDLDHHTVNFKYTGTTDDDAIRMAFDRDKSDER--KEWIRRSENEITNEDDGKTEISYQE 588
Query: 464 VSRGRL-QFG 490
G+L QFG
Sbjct: 589 FVDGQLMQFG 598
>Z83113-4|CAB05546.2| 1020|Caenorhabditis elegans Hypothetical protein
K08H10.7 protein.
Length = 1020
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +3
Query: 417 KYTFMMVE--N*TRILQSFPGD--VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDL 584
KYTF++++ + TR+L+ D V N D+ ++ VA ++ W E+ ++ +
Sbjct: 838 KYTFIVIQKRHNTRLLRRMEKDKPVVNKDLTP---AETDVAVAAVKQWEEDMKESKETGI 894
Query: 585 VNPDS 599
VNP S
Sbjct: 895 VNPSS 899
>AF180730-1|AAF06159.1| 1020|Caenorhabditis elegans RNA interference
promoting factorRDE-1 protein.
Length = 1020
Score = 29.9 bits (64), Expect = 2.3
Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Frame = +3
Query: 417 KYTFMMVE--N*TRILQSFPGD--VFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDL 584
KYTF++++ + TR+L+ D V N D+ ++ VA ++ W E+ ++ +
Sbjct: 838 KYTFIVIQKRHNTRLLRRMEKDKPVVNKDLTP---AETDVAVAAVKQWEEDMKESKETGI 894
Query: 585 VNPDS 599
VNP S
Sbjct: 895 VNPSS 899
>Z78542-6|CAB01749.2| 695|Caenorhabditis elegans Hypothetical
protein F20D1.7 protein.
Length = 695
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/64 (29%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 113 IAIAAMAAVTNLSNVLKN-GNDNFTARMFTEVV-KNNPGKSIVLSAFSVLPPLAQLALAS 286
+A+ ++ + N+L+N G D+ R V+ +NN KSI + F +P L L L+
Sbjct: 124 MALTSLLELDLSDNMLENLGADSIHIRSIQRVILRNNQIKSIGVHVFRYMPTLKMLDLSG 183
Query: 287 DGET 298
+ T
Sbjct: 184 NNMT 187
>Z83103-9|CAI79157.1| 376|Caenorhabditis elegans Hypothetical
protein D1025.10 protein.
Length = 376
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/23 (52%), Positives = 13/23 (56%)
Frame = +1
Query: 628 STPSISXGAWSSKFDERLTSDRD 696
STP+ S W S DE LT D D
Sbjct: 87 STPNNSRSNWRSDMDEELTDDED 109
>Z68752-4|CAA92983.1| 447|Caenorhabditis elegans Hypothetical
protein T12G3.4 protein.
Length = 447
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = -3
Query: 157 HIREICDGCHCRDGDSKQTNDCLHVCGLRLSNV 59
H ++ G H DG K+ N C GLRLS+V
Sbjct: 147 HAVQLAQGNHDCDGSYKKMNLCGRPLGLRLSDV 179
>Z93383-11|CAI58635.1| 279|Caenorhabditis elegans Hypothetical
protein F54B8.16 protein.
Length = 279
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/42 (33%), Positives = 24/42 (57%)
Frame = -1
Query: 204 TSVNILAVKLSFPFLSTLERFVTAAIAAMAIVNKQMIVFMFV 79
TSV + +K +F F+ TLERF++ N++ I F ++
Sbjct: 87 TSVTMGIIKGTFAFMITLERFISVFFPIHYRNNRRKIPFYWI 128
>U88311-6|AAB42347.1| 382|Caenorhabditis elegans Hypothetical
protein C10H11.8 protein.
Length = 382
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/49 (34%), Positives = 22/49 (44%)
Frame = +3
Query: 456 LQSFPGDVFNSDVQNIDFSKNTVAAKSINDWVEENTNNRIKDLVNPDSL 602
L SFPG S V N + V+ S + WV + N+ L PD L
Sbjct: 161 LLSFPGSTVTSIVPNTHQTHLFVSTNSAHVWVWDVVNHIFMRLPMPDDL 209
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,518,436
Number of Sequences: 27780
Number of extensions: 356961
Number of successful extensions: 1150
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1148
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2066533546
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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