Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_O01
(913 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 0.001
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 38 0.003
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 38 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.005
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 36 0.011
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.014
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 28 0.020
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.032
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.042
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 30 0.52
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 0.69
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 29 0.92
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 0.92
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 28 1.6
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 28 1.6
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 28 1.6
SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr... 28 2.1
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 28 2.1
SPAC1B1.03c |kap95||karyopherin Kap95|Schizosaccharomyces pombe|... 27 3.7
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 27 3.7
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 23 4.3
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 4.9
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 38.7 bits (86), Expect = 0.001
Identities = 25/77 (32%), Positives = 26/77 (33%), Gaps = 1/77 (1%)
Frame = +1
Query: 451 AXRXPPPPTPXXPXPPPSXPXXXVLXXXXXXXXXXXXXNTXXXPP-PPPXXXSPPXXGGG 627
A R PP P P PPS P PP PP +PP G
Sbjct: 409 ASRTSTPPVPTPPSLPPSAPPSL-----PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGM 463
Query: 628 XGAPLPPXXXPPPPPPP 678
AP P P PPP P
Sbjct: 464 PAAPPLPPAAPAPPPAP 480
Score = 37.5 bits (83), Expect = 0.003
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = +1
Query: 580 PPPPPXXXSPPXXGGGXGAPLPPXXXPPPPPPP 678
PPPPP PP PLPP PPPPP
Sbjct: 337 PPPPP----PPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 33.5 bits (73), Expect = 0.043
Identities = 16/34 (47%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Frame = +1
Query: 580 PPPPPXXXS---PPXXGGGXGAPLPPXXXPPPPP 672
PPPPP + PP G + LPP PPPPP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPP---PPPPP 343
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/47 (38%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Frame = +2
Query: 377 TPPXRXPPPPPXXGXPP-PPXXKXXXPXGXP--PPQHPXHPXPXPPP 508
TPP PP P P PP P G P PP P P P P
Sbjct: 414 TPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 30.3 bits (65), Expect = 0.40
Identities = 18/70 (25%), Positives = 20/70 (28%), Gaps = 4/70 (5%)
Frame = +2
Query: 395 PPPPPXXGXPPPPXXKXXXPXGXPPP----QHPXHPXPXPPPHXPXSXXXXXXXXXXXXH 562
P PP PPPP + G PP P PPP P
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASR 411
Query: 563 QTXXXXPPPP 592
+ P PP
Sbjct: 412 TSTPPVPTPP 421
Score = 29.5 bits (63), Expect = 0.69
Identities = 19/72 (26%), Positives = 20/72 (27%), Gaps = 2/72 (2%)
Frame = +1
Query: 466 PPPTPXXPXPPPSXPXXXVLXXXXXXXXXXXXXNTXXXPPPPPXXXSP--PXXGGGXGAP 639
PP P PPP N PP P +P P G
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 640 LPPXXXPPPPPP 675
PP PP PP
Sbjct: 414 TPPVPTPPSLPP 425
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/71 (28%), Positives = 24/71 (33%)
Frame = +1
Query: 466 PPPTPXXPXPPPSXPXXXVLXXXXXXXXXXXXXNTXXXPPPPPXXXSPPXXGGGXGAPLP 645
PPP+ PP+ P + N+ PP PP P A
Sbjct: 257 PPPSNGTVSSPPNSPPRPIAPVSMNPAI-----NSTSKPPLPP-----PSSRVSAAALAA 306
Query: 646 PXXXPPPPPPP 678
PPPPPPP
Sbjct: 307 NKKRPPPPPPP 317
Score = 26.6 bits (56), Expect = 4.9
Identities = 14/56 (25%), Positives = 16/56 (28%)
Frame = +2
Query: 422 PPPPXXKXXXPXGXPPPQHPXHPXPXPPPHXPXSXXXXXXXXXXXXHQTXXXXPPP 589
PPPP + P P P PPP S + PPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +2
Query: 383 PXRXPPPPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPPPHXP 517
P P PP PP P P PP P P P P P
Sbjct: 444 PAAPPLPPSAPIAPPLPAGMPAAPP-LPPAAPAPPPAPAPAPAAP 487
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 2/30 (6%)
Frame = +1
Query: 580 PPPPPXXXS--PPXXGGGXGAPLPPXXXPP 663
PP PP S PP AP PP PP
Sbjct: 230 PPIPPSIPSSRPPERVPSLSAPAPPPIPPP 259
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/50 (30%), Positives = 15/50 (30%)
Frame = +3
Query: 639 PSPXXXPPPPPPPPXAXXFSSXXXXXXXXXXXXXXXXXXXXXXXPPPPPP 788
PS PPP PPP SS PP PPP
Sbjct: 246 PSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 771 PPPPPPPXAAXXXSXP 818
PPPPPPP + S P
Sbjct: 337 PPPPPPPRSNAAGSIP 352
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/47 (29%), Positives = 14/47 (29%)
Frame = +2
Query: 383 PXRXPPPPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPPPHXPXS 523
P PP P P P PP P P PP P S
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPS 434
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 37.5 bits (83), Expect = 0.003
Identities = 24/77 (31%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Frame = +2
Query: 380 PPXRXPPPP----PXXGXPPPPXXKXXXPXGXPPPQH--PXHPXPXPPPHXPXSXXXXXX 541
P PPPP P PPPP PPP H P P PP H
Sbjct: 229 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG---EHM 285
Query: 542 XXXXXXHQTXXXXPPPP 592
H+ PPPP
Sbjct: 286 PPPPMHHEPGEHMPPPP 302
Score = 37.5 bits (83), Expect = 0.003
Identities = 24/77 (31%), Positives = 25/77 (32%), Gaps = 6/77 (7%)
Frame = +2
Query: 380 PPXRXPPPP----PXXGXPPPPXXKXXXPXGXPPPQH--PXHPXPXPPPHXPXSXXXXXX 541
P PPPP P PPPP PPP H P P PP H
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG---EHM 324
Query: 542 XXXXXXHQTXXXXPPPP 592
H+ PPPP
Sbjct: 325 PPPPMHHEPGEHMPPPP 341
Score = 33.5 bits (73), Expect = 0.043
Identities = 22/75 (29%), Positives = 22/75 (29%), Gaps = 4/75 (5%)
Frame = +2
Query: 380 PPXRXPPPP----PXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPPPHXPXSXXXXXXXX 547
P PPPP P PPPP PPP H PPP P
Sbjct: 216 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP--PMHHEPGEHMP 273
Query: 548 XXXXHQTXXXXPPPP 592
H PPP
Sbjct: 274 PPPMHHEPGEHMPPP 288
Score = 33.5 bits (73), Expect = 0.043
Identities = 22/75 (29%), Positives = 22/75 (29%), Gaps = 4/75 (5%)
Frame = +2
Query: 380 PPXRXPPPP----PXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPPPHXPXSXXXXXXXX 547
P PPPP P PPPP PPP H PPP P
Sbjct: 242 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP--PMHHEPGEHMP 299
Query: 548 XXXXHQTXXXXPPPP 592
H PPP
Sbjct: 300 PPPMHHEPGEHMPPP 314
Score = 33.5 bits (73), Expect = 0.043
Identities = 22/75 (29%), Positives = 22/75 (29%), Gaps = 4/75 (5%)
Frame = +2
Query: 380 PPXRXPPPP----PXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPPPHXPXSXXXXXXXX 547
P PPPP P PPPP PPP H PPP P
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP--PMHHEPGEHMP 312
Query: 548 XXXXHQTXXXXPPPP 592
H PPP
Sbjct: 313 PPPMHHEPGEHMPPP 327
Score = 32.3 bits (70), Expect = 0.098
Identities = 24/78 (30%), Positives = 25/78 (32%), Gaps = 7/78 (8%)
Frame = +2
Query: 380 PPXRXPPPP----PXXGXPPPPXXKXXXPXGXPPPQH-PXHPXPXPPP--HXPXSXXXXX 538
P PPPP P PPPP PPP H PPP H P
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGE----H 258
Query: 539 XXXXXXXHQTXXXXPPPP 592
H+ PPPP
Sbjct: 259 MPPPPMHHEPGEHMPPPP 276
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 37.5 bits (83), Expect = 0.003
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = +2
Query: 380 PPXRXPPPPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPP 505
PP PPP PP P P PPP P P PP
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 29.9 bits (64), Expect = 0.52
Identities = 22/77 (28%), Positives = 24/77 (31%), Gaps = 5/77 (6%)
Frame = +1
Query: 463 PPPPTPXXPX-PPPSXPXXXVLXXXXXXXXXXXXXNTXXXPP--PPPXXXSPPXXGGGXG 633
P PPTP PP S P + P PPP + P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 634 APLPPXXXPPPP--PPP 678
LP P PP PPP
Sbjct: 188 PSLPSAVPPMPPKVPPP 204
Score = 26.6 bits (56), Expect = 4.9
Identities = 15/48 (31%), Positives = 16/48 (33%), Gaps = 2/48 (4%)
Frame = +2
Query: 380 PPXRXPPPPPXXGXPPPPXXKXXXPXGXP--PPQHPXHPXPXPPPHXP 517
PP P PP P P P P + P P PPP P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 26.2 bits (55), Expect = 6.5
Identities = 13/38 (34%), Positives = 14/38 (36%)
Frame = +2
Query: 404 PPXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPPPHXP 517
PP PP P + P PP P P P P P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPP--RPSIPPPSPASAPP 159
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/44 (31%), Positives = 15/44 (34%), Gaps = 2/44 (4%)
Frame = +2
Query: 383 PXRXPPPPPXXGXPPPPXXKXXXPXGXP--PPQHPXHPXPXPPP 508
P + PP P P P P P P P P PPP
Sbjct: 161 PSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 36.7 bits (81), Expect = 0.005
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +2
Query: 383 PXRXPPPPPXXGXPPPPXXKXXXPXGXPPPQHPXHP 490
P PPP P G PPPP PPP P P
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 34.3 bits (75), Expect = 0.024
Identities = 25/74 (33%), Positives = 27/74 (36%)
Frame = +1
Query: 457 RXPPPPTPXXPXPPPSXPXXXVLXXXXXXXXXXXXXNTXXXPPPPPXXXSPPXXGGGXGA 636
+ PPPP P P P+ V PPPPP PP G G
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPV----------PPPAPIMGGPPPPP----PPPGVAGAGP 775
Query: 637 PLPPXXXPPPPPPP 678
P PPPPPPP
Sbjct: 776 P------PPPPPPP 783
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/43 (39%), Positives = 18/43 (41%)
Frame = +2
Query: 389 RXPPPPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPPPHXP 517
+ PPPPP P P P PPP P P PPP P
Sbjct: 730 KSPPPPPPAVIVPTP---APAPIPVPPPA-PIMGGPPPPPPPP 768
Score = 30.7 bits (66), Expect = 0.30
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 9/50 (18%)
Frame = +2
Query: 395 PPPPPXXGXP---------PPPXXKXXXPXGXPPPQHPXHPXPXPPPHXP 517
PPPPP P PPP P PPP P PPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 30.7 bits (66), Expect = 0.30
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Frame = +3
Query: 621 GGXGGPPSPXXX----PPPPPPPPXA 686
GG PP P PPPPPPPP A
Sbjct: 759 GGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 29.9 bits (64), Expect = 0.52
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +2
Query: 398 PPPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPPPHXP 517
P P PPP P PPP P PPP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/70 (25%), Positives = 19/70 (27%), Gaps = 1/70 (1%)
Frame = +1
Query: 463 PPPPTPXXPXPPPSX-PXXXVLXXXXXXXXXXXXXNTXXXPPPPPXXXSPPXXGGGXGAP 639
PPPP P P P+ P PPPP P GG
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYY 793
Query: 640 LPPXXXPPPP 669
P P P
Sbjct: 794 APAPQAEPEP 803
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +3
Query: 378 PPPXXXPPPPPXXGXPPP 431
P P PPP P G PPP
Sbjct: 746 PAPIPVPPPAPIMGGPPP 763
Score = 28.7 bits (61), Expect = 1.2
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 771 PPPPPPPXAAXXXSXPP 821
PPPPPPP A PP
Sbjct: 762 PPPPPPPGVAGAGPPPP 778
Score = 27.5 bits (58), Expect = 2.8
Identities = 18/59 (30%), Positives = 21/59 (35%)
Frame = +3
Query: 636 PPSPXXXPPPPPPPPXAXXFSSXXXXXXXXXXXXXXXXXXXXXXXPPPPPPPXAAXXXS 812
PP+P PPPPPPP + PPPPPPP + S
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPP---------------------PPPPPPPAVSAGGS 790
Score = 27.5 bits (58), Expect = 2.8
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 771 PPPPPPPXAAXXXSXPP 821
PPPPPPP PP
Sbjct: 761 PPPPPPPPGVAGAGPPP 777
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 35.5 bits (78), Expect = 0.011
Identities = 16/31 (51%), Positives = 16/31 (51%)
Frame = -1
Query: 673 GGGGGGXXXGEGGPPXPPXXGGGXEXXGGGG 581
GGG GG G GGPP P GG GG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEG 217
Score = 34.7 bits (76), Expect = 0.018
Identities = 20/47 (42%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Frame = -2
Query: 516 GXWGGGXGXGXXGCWG-GGXPXGXXXXXXGGGGXPXXGGGGGXRXGG 379
G +GGG G G G GG P G G GG P GGG GG
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 32.3 bits (70), Expect = 0.098
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 674 GGGGGGXXXGGRGAPXPPPXXGGEXXXGGGGG 579
G GGG G G+ PPP GG GG GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGG 215
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/35 (48%), Positives = 17/35 (48%), Gaps = 1/35 (2%)
Frame = -1
Query: 679 GGGGGGGGXXXGEGG-PPXPPXXGGGXEXXGGGGG 578
G GGG GG G GG P GGG GGG G
Sbjct: 225 GFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG 259
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = -1
Query: 679 GGGGGGGGXXXGEGGPPXPPXXGGGXEXXGGGGG 578
G GGG GG G GG GG GG GG
Sbjct: 192 GFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGG 225
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/33 (48%), Positives = 16/33 (48%)
Frame = -1
Query: 679 GGGGGGGGXXXGEGGPPXPPXXGGGXEXXGGGG 581
GG GG GG G GG P GGG GG G
Sbjct: 242 GGPGGFGGGLGGFGGGPG--GFGGGPGGHGGPG 272
Score = 28.3 bits (60), Expect = 1.6
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -2
Query: 516 GXWGGGXGXGXXGCWGGGXPXGXXXXXXGGGGXPXXGGGGGXRXGG 379
G +GGG G G G G G GG GGG G GG
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG 236
Score = 26.2 bits (55), Expect = 6.5
Identities = 15/35 (42%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = -3
Query: 677 GGGGGGGXXXGGRG--APXPPPXXGGEXXXGGGGG 579
GG GG G GG G P GG GGG G
Sbjct: 211 GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPG 245
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.014
Identities = 21/74 (28%), Positives = 24/74 (32%), Gaps = 3/74 (4%)
Frame = +1
Query: 463 PPPPTPXXPXPPPSXPXXXVLXXXXXXXXXXXXXNTXXXPPPPPXXXSPPXXGGGXG--- 633
PP P P PP P V + PP PP +PP G
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Query: 634 APLPPXXXPPPPPP 675
P+P PP P P
Sbjct: 1229 VPVPTAKAPPVPAP 1242
Score = 34.3 bits (75), Expect = 0.024
Identities = 20/73 (27%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = +1
Query: 463 PPPPTPXXPXPPPSXPXXXVLXXXXXXXXXXXXXNTXXXPPPPPXXXSPPXXGGGXGA-P 639
PP P P P P PP PP +PP G P
Sbjct: 1150 PPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 640 LPPXXXPPPPPPP 678
+PP PP P P
Sbjct: 1210 VPPPSTAPPVPTP 1222
Score = 32.3 bits (70), Expect = 0.098
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 3/51 (5%)
Frame = +2
Query: 380 PPXRXPP-PPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXP--XPPPHXPXS 523
P PP P P G PP P P PP + P P P PP P S
Sbjct: 1164 PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS 1214
Score = 31.9 bits (69), Expect = 0.13
Identities = 19/73 (26%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = +1
Query: 463 PPPPTPXXPXPPPSXPXXXVLXXXXXXXXXXXXXNTXXXPPPPPXXXSPPXXGGGXGAPL 642
PP P P PP P + P P P +PP P+
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV 1161
Query: 643 P-PXXXPPPPPPP 678
P P PP P P
Sbjct: 1162 PKPSVAAPPVPAP 1174
Score = 31.1 bits (67), Expect = 0.23
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 4/52 (7%)
Frame = +2
Query: 380 PPXRXPP-PPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXP---XPPPHXPXS 523
PP PP P P G PP P P P P P P PP P S
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPSS 1244
Score = 30.3 bits (65), Expect = 0.40
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +2
Query: 380 PPXRXPPPPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXP 496
P PP PP PP P P PP P P P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/41 (34%), Positives = 14/41 (34%)
Frame = +2
Query: 395 PPPPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPPPHXP 517
P P P G PP P P P P P P P P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 27.9 bits (59), Expect = 2.1
Identities = 14/46 (30%), Positives = 14/46 (30%)
Frame = +2
Query: 380 PPXRXPPPPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPPPHXP 517
P P P P PP P P P P P P P P
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 3/51 (5%)
Frame = +2
Query: 380 PPXRXPPPPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXP---XPPPHXPXS 523
P PP P G PP P P P P P P PP P S
Sbjct: 1126 PSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSS 1176
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/41 (31%), Positives = 13/41 (31%)
Frame = +2
Query: 383 PXRXPPPPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPP 505
P PP P PP P P PP P P P
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIP 1077
Score = 27.1 bits (57), Expect = 3.7
Identities = 15/47 (31%), Positives = 15/47 (31%), Gaps = 1/47 (2%)
Frame = +2
Query: 380 PPXRXPP-PPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPPPHXP 517
P PP P P PP P P P P P P P P
Sbjct: 1097 PSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 26.6 bits (56), Expect = 4.9
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +2
Query: 380 PPXRXPPPPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXP 496
P PP P G PP P P P P P P
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 26.2 bits (55), Expect = 6.5
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = +2
Query: 380 PPXRXPPPPPXXGXPPP-PXXKXXXPXGXPPPQHPXHPXPXPPPHXPXS 523
P R PP P PP P P P P P P P P S
Sbjct: 1007 PLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKS 1055
Score = 25.8 bits (54), Expect = 8.5
Identities = 22/78 (28%), Positives = 24/78 (30%), Gaps = 4/78 (5%)
Frame = +1
Query: 457 RXPPPPTPXXPXPPPSXPXXX--VLXXXXXXXXXXXXXNTXXXPPPPPXXXSP-PXXGGG 627
+ PP P P PP P V PPP P S P
Sbjct: 1020 KAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAP 1079
Query: 628 XGAP-LPPXXXPPPPPPP 678
GAP +P PP P P
Sbjct: 1080 SGAPPVPAPSGIPPVPKP 1097
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 28.3 bits (60), Expect(2) = 0.020
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 645 PXXXPPPPPPPP 680
P PPPPPPPP
Sbjct: 1091 PSAVPPPPPPPP 1102
Score = 25.0 bits (52), Expect(2) = 0.020
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +3
Query: 771 PPPPPPPXA 797
PPPPPPP A
Sbjct: 1095 PPPPPPPPA 1103
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.9 bits (74), Expect = 0.032
Identities = 18/50 (36%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = +2
Query: 377 TPPXRXPPP-PPXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPPPHXPXS 523
TPP R PP P PP P P P P PPP P S
Sbjct: 1689 TPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPAS 1738
Score = 31.1 bits (67), Expect = 0.23
Identities = 17/46 (36%), Positives = 17/46 (36%), Gaps = 4/46 (8%)
Frame = +2
Query: 380 PPXRXP--PPPPXXGXPPPP--XXKXXXPXGXPPPQHPXHPXPXPP 505
PP PPPP PPPP P PPP P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 31.1 bits (67), Expect = 0.23
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = +1
Query: 580 PPPPPXXXSPPXXGGGXGAPLPPXXXPPPPPP 675
PPPPP PP P P PPPP P
Sbjct: 1707 PPPPPMSVPPPP--SAPPMPAGPPSAPPPPLP 1736
Score = 29.1 bits (62), Expect = 0.92
Identities = 16/44 (36%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Frame = +1
Query: 580 PPP---PPXXXSPPXXGGGXGAPLPPXXXPPPPPPPXXXXXSLL 702
PPP PP +PP G AP PP P P S L
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNPGDRSAL 1752
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 580 PPPPPXXXSPPXXGGGXGAPLPPXXXPPPPPPP 678
PP P +PP P PP PPPP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPP-PPMSVPPPPSAP 1721
Score = 27.1 bits (57), Expect(2) = 0.093
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +3
Query: 636 PPSPXXXPPPPPPPP 680
PP P PPPP PP
Sbjct: 1708 PPPPMSVPPPPSAPP 1722
Score = 23.8 bits (49), Expect(2) = 0.093
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 771 PPPPPPPXAAXXXSXPP 821
PPP PP A S PP
Sbjct: 1716 PPPSAPPMPAGPPSAPP 1732
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 380 PPXRXPPPPPXXGXPPPPXXKXXXPXG 460
PP PPPPP G PP P G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 31.1 bits (67), Expect = 0.23
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +1
Query: 634 APLPPXXXPPPPPPP 678
A LPP PPPPPPP
Sbjct: 2 ASLPPGNPPPPPPPP 16
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 404 PPXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPP 505
PP PPPP P G PP P P P PP
Sbjct: 5 PPGNPPPPPP------PPGFEPPSQP--PPPPPP 30
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +1
Query: 583 PPPPXXXSPPXXGGGXGAPLPPXXXPPPPPPP 678
PPPP PP G P PPPPPPP
Sbjct: 9 PPPP----PPPPG------FEPPSQPPPPPPP 30
Score = 28.3 bits (60), Expect = 1.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +3
Query: 771 PPPPPPPXAAXXXSXPP 821
PPPPPPP S PP
Sbjct: 9 PPPPPPPPGFEPPSQPP 25
Score = 28.3 bits (60), Expect(2) = 0.042
Identities = 11/17 (64%), Positives = 11/17 (64%), Gaps = 2/17 (11%)
Frame = +3
Query: 636 PPSPXXXPP--PPPPPP 680
PP P PP PPPPPP
Sbjct: 13 PPPPGFEPPSQPPPPPP 29
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 589 PPXXXSPPXXGGGXGAPLPPXXXPPPPPP 675
PP PP G PP PPPPPP
Sbjct: 5 PPGNPPPPPPPPGFE---PPSQPPPPPPP 30
Score = 26.2 bits (55), Expect = 6.5
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +3
Query: 771 PPPPPPPXAAXXXSXPP 821
PPPPPPP PP
Sbjct: 10 PPPPPPPGFEPPSQPPP 26
Score = 23.8 bits (49), Expect(2) = 0.042
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 771 PPPPPPP 791
PPPPPPP
Sbjct: 24 PPPPPPP 30
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.9 bits (64), Expect = 0.52
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +1
Query: 586 PPPXXXSPPXXGGGXGAPLPPXXXPPPPPPP 678
PPP P P PPPPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPP 197
Score = 29.1 bits (62), Expect = 0.92
Identities = 18/61 (29%), Positives = 19/61 (31%), Gaps = 10/61 (16%)
Frame = +3
Query: 639 PSPXXXPPPPPPPPXAXX----------FSSXXXXXXXXXXXXXXXXXXXXXXXPPPPPP 788
PS PPPPPPPP + S PPPPPP
Sbjct: 184 PSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPP 243
Query: 789 P 791
P
Sbjct: 244 P 244
Score = 26.2 bits (55), Expect = 6.5
Identities = 20/78 (25%), Positives = 23/78 (29%)
Frame = +1
Query: 445 PXAXRXPPPPTPXXPXPPPSXPXXXVLXXXXXXXXXXXXXNTXXXPPPPPXXXSPPXXGG 624
P + P P PPP P + + P PP
Sbjct: 173 PPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEI---PPTYTP 229
Query: 625 GXGAPLPPXXXPPPPPPP 678
PLP PPPPPPP
Sbjct: 230 KQADPLPA---PPPPPPP 244
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.5 bits (63), Expect = 0.69
Identities = 15/41 (36%), Positives = 15/41 (36%)
Frame = -2
Query: 504 GGXGXGXXGCWGGGXPXGXXXXXXGGGGXPXXGGGGGXRXG 382
GG G G G GGG GG GG G R G
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -2
Query: 516 GXWGGGXGXGXXGCWGGGXPXGXXXXXXGGGGXPXXGGGGGXRXGG 379
G +GGG G G G GG G GG GG G GG
Sbjct: 26 GGFGGGRG-GARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 26.2 bits (55), Expect = 6.5
Identities = 14/43 (32%), Positives = 15/43 (34%)
Frame = -2
Query: 516 GXWGGGXGXGXXGCWGGGXPXGXXXXXXGGGGXPXXGGGGGXR 388
G GG G G G GG G GG G GG +
Sbjct: 30 GGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGGAK 72
Score = 25.8 bits (54), Expect = 8.5
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = -3
Query: 677 GGGGGGGXXXGGRGAPXPPPXXGGEXXXGGGGG 579
G GG G GGRG G GG GG
Sbjct: 20 GFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 29.1 bits (62), Expect = 0.92
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +2
Query: 380 PPXRXPPPPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPP 505
P PPPP PP PP Q P HP P P
Sbjct: 921 PAIASPPPPKVGETYHPPTASGTR---VPPVQQPSHPNPYTP 959
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 29.1 bits (62), Expect = 0.92
Identities = 16/53 (30%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Frame = +3
Query: 639 PSPXXXPPPPPPPPXAXXFS--SXXXXXXXXXXXXXXXXXXXXXXXPPPPPPP 791
P+ P PPPPPP S + PPPPPPP
Sbjct: 899 PTIITHPTPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPP 951
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +3
Query: 645 PXXXPPPPPPPP 680
P PPPPPPPP
Sbjct: 942 PAFPPPPPPPPP 953
Score = 25.8 bits (54), Expect = 8.5
Identities = 9/15 (60%), Positives = 10/15 (66%)
Frame = +1
Query: 634 APLPPXXXPPPPPPP 678
A + P PPPPPPP
Sbjct: 938 AGVMPAFPPPPPPPP 952
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/37 (32%), Positives = 13/37 (35%)
Frame = +2
Query: 395 PPPPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPP 505
PPPPP PP P +P P PP
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPP 242
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 28.3 bits (60), Expect = 1.6
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = +3
Query: 657 PPPPPPPPXAXXF 695
PPPPPPPP + F
Sbjct: 306 PPPPPPPPPSNDF 318
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 28.3 bits (60), Expect = 1.6
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -1
Query: 685 AXGGGGGGGGXXXGEGGPPXPPXXGGGXEXXGGGGG 578
A GGGG GG G GG GG GGG
Sbjct: 132 AFAGGGGMGGGMGGMGGMDDDMDMDGGFGTRTRGGG 167
>SPAC6C3.02c |||CHCH domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 172
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +1
Query: 589 PPXXXSPPXXGGGXGAPLPPXXXPPPPPP 675
PP + P A LPP PPP P
Sbjct: 9 PPPRRAAPARSASTAAALPPRTMAPPPAP 37
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/46 (36%), Positives = 19/46 (41%)
Frame = -2
Query: 516 GXWGGGXGXGXXGCWGGGXPXGXXXXXXGGGGXPXXGGGGGXRXGG 379
G + GG G G G +GG G GG G GG G GG
Sbjct: 141 GGFRGGRG-GSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
Score = 25.8 bits (54), Expect = 8.5
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -2
Query: 504 GGXGXGXXGCWGGGXPXGXXXXXXGGGGXPXXGGG-GGXR 388
GG G G +GGG G GG GG GG R
Sbjct: 152 GGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGGFR 191
>SPAC1B1.03c |kap95||karyopherin Kap95|Schizosaccharomyces pombe|chr
1|||Manual
Length = 863
Score = 27.1 bits (57), Expect = 3.7
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = +2
Query: 83 QGTL*DSHFVSNCCWSTCN*IC 148
QG + V+NCCW+ N +C
Sbjct: 458 QGLTDNPRIVANCCWAFMNLVC 479
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/28 (35%), Positives = 11/28 (39%)
Frame = +2
Query: 422 PPPPXXKXXXPXGXPPPQHPXHPXPXPP 505
PPPP P PPP + P P
Sbjct: 48 PPPPSVDHSAPPSGPPPSYSNSAAPATP 75
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 23.4 bits (48), Expect(2) = 4.3
Identities = 8/15 (53%), Positives = 9/15 (60%)
Frame = +3
Query: 777 PPPPPXAAXXXSXPP 821
PPPPP A + PP
Sbjct: 1882 PPPPPPMALPKAGPP 1896
Score = 21.4 bits (43), Expect(2) = 4.3
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 630 GGPPSPXXXPPPPPP 674
G S PPPPPP
Sbjct: 1873 GSDLSNQAAPPPPPP 1887
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 4.9
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +3
Query: 657 PPPPPPPP 680
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,198,642
Number of Sequences: 5004
Number of extensions: 45810
Number of successful extensions: 862
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 455
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 462505890
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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