Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_O01
         (913 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       28   0.14 
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    25   0.25 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    27   0.31 
DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450 monoo...    24   1.7  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   2.5  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.9  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             23   3.9  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   6.7  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 27.9 bits (59), Expect = 0.14
 Identities = 14/33 (42%), Positives = 15/33 (45%)
 Frame = +2

Query: 383 PXRXPPPPPXXGXPPPPXXKXXXPXGXPPPQHP 481
           P R  PP P  G PP        P G PP Q+P
Sbjct: 34  PQRGSPPNPSQGPPP------GGPPGAPPSQNP 60



 Score = 26.6 bits (56), Expect = 0.31
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +3

Query: 630 GGPPSPXXXPPPPPPP 677
           G PP+P   PPP  PP
Sbjct: 37  GSPPNPSQGPPPGGPP 52



 Score = 25.8 bits (54), Expect = 0.55
 Identities = 13/42 (30%), Positives = 13/42 (30%)
 Frame = +2

Query: 398 PPPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPPPHXPXS 523
           P     G  P P      P    PP     P P  PP  P S
Sbjct: 16  PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPS 57



 Score = 23.4 bits (48), Expect = 2.9
 Identities = 12/33 (36%), Positives = 13/33 (39%)
 Frame = +1

Query: 580 PPPPPXXXSPPXXGGGXGAPLPPXXXPPPPPPP 678
           P P P     P      G+P  P   PPP  PP
Sbjct: 21  PGPQPSPHQSPQ-APQRGSPPNPSQGPPPGGPP 52



 Score = 23.4 bits (48), Expect = 2.9
 Identities = 11/27 (40%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
 Frame = +2

Query: 404 PPXXGXPPPPXXKXXXPXGXPP-PQHP 481
           PP  G P PP        G PP P  P
Sbjct: 410 PPSAGAPMPPIPNMSNMSGMPPLPNMP 436



 Score = 23.0 bits (47), Expect = 3.9
 Identities = 11/38 (28%), Positives = 11/38 (28%)
 Frame = +2

Query: 395 PPPPPXXGXPPPPXXKXXXPXGXPPPQHPXHPXPXPPP 508
           P P P      P       P   PPP  P    P   P
Sbjct: 23  PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 25.4 bits (53), Expect = 0.72
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +1

Query: 643 PPXXXPPPPPP 675
           PP   PPPPPP
Sbjct: 338 PPKPAPPPPPP 348



 Score = 25.0 bits (52), Expect = 0.96
 Identities = 9/17 (52%), Positives = 9/17 (52%)
 Frame = +2

Query: 377 TPPXRXPPPPPXXGXPP 427
           TPP   PPPPP     P
Sbjct: 337 TPPKPAPPPPPPSSSGP 353



 Score = 23.8 bits (49), Expect(2) = 0.41
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 469 PPTPXXPXPPPS 504
           PP P  P PPPS
Sbjct: 338 PPKPAPPPPPPS 349



 Score = 23.4 bits (48), Expect(2) = 0.25
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 657 PPPPPPPP 680
           P PPPPPP
Sbjct: 341 PAPPPPPP 348



 Score = 23.0 bits (47), Expect = 3.9
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +3

Query: 621 GGXGGPPSPXXXPPPP 668
           G    PP P   PPPP
Sbjct: 333 GDSDTPPKPAPPPPPP 348



 Score = 22.6 bits (46), Expect = 5.1
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +1

Query: 463 PPPPTPXXPXPPPSXP 510
           PP P P  P P  S P
Sbjct: 338 PPKPAPPPPPPSSSGP 353



 Score = 21.8 bits (44), Expect(2) = 0.25
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +3

Query: 774 PPPPPPXAAXXXS 812
           PPPPPP ++   S
Sbjct: 343 PPPPPPSSSGPDS 355



 Score = 20.6 bits (41), Expect(2) = 0.41
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 580 PPPPPXXXSPP 612
           PPPPP   S P
Sbjct: 343 PPPPPPSSSGP 353


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 26.6 bits (56), Expect = 0.31
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +3

Query: 657  PPPPPPPP 680
            PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362



 Score = 24.2 bits (50), Expect = 1.7
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = +3

Query: 771  PPPPPPPXAA 800
            PPPPPPP ++
Sbjct: 1355 PPPPPPPPSS 1364


>DQ232888-1|ABB36783.1|  499|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 499

 Score = 24.2 bits (50), Expect = 1.7
 Identities = 10/21 (47%), Positives = 16/21 (76%), Gaps = 1/21 (4%)
 Frame = +2

Query: 191 VCTYTLKHKNGNNKIKP-FLN 250
           V T T+K++N NN ++P F+N
Sbjct: 252 VVTDTIKYRNDNNIVRPDFIN 272


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.0 bits (42), Expect(2) = 2.5
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = -1

Query: 820 GGXEXXXAAXGGGGGG 773
           GG     A  GGGGGG
Sbjct: 36  GGSIVVGANNGGGGGG 51



 Score = 20.6 bits (41), Expect(2) = 2.5
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = -1

Query: 679 GGGGGGGGXXXG 644
           GGGGGG G   G
Sbjct: 46  GGGGGGLGIASG 57


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +1

Query: 619  GGGXGAPLPPXXXPPPPPP 675
            G     P+     PPPPPP
Sbjct: 1846 GSARNIPVSGSPEPPPPPP 1864



 Score = 23.4 bits (48), Expect = 2.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 657  PPPPPPPP 680
            P PPPPPP
Sbjct: 1857 PEPPPPPP 1864



 Score = 23.0 bits (47), Expect = 3.9
 Identities = 8/18 (44%), Positives = 9/18 (50%)
 Frame = +1

Query: 625  GXGAPLPPXXXPPPPPPP 678
            G    +P    P PPPPP
Sbjct: 1846 GSARNIPVSGSPEPPPPP 1863


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 23.0 bits (47), Expect = 3.9
 Identities = 9/15 (60%), Positives = 9/15 (60%)
 Frame = -2

Query: 432 GGGGXPXXGGGGGXR 388
           G GG P  G GGG R
Sbjct: 575 GVGGVPVVGAGGGRR 589


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = +2

Query: 452 PXGXPPPQHPXHPXPXPPP 508
           P   PP  +P  P P P P
Sbjct: 433 PILTPPSSNPVSPVPSPDP 451


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,310
Number of Sequences: 438
Number of extensions: 11037
Number of successful extensions: 73
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 49
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29630055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)