Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_N23
(886 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 37 0.003
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 36 0.008
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 34 0.031
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.041
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.071
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 31 0.22
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 31 0.29
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.50
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 0.67
SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1 |Sc... 29 1.2
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 28 1.5
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 2.7
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 27 3.6
SPAC31G5.21 |||human family 32A homolog|Schizosaccharomyces pomb... 27 3.6
SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces... 27 4.7
SPAC22F8.11 |plc1||phosphoinositide phospholipase C Plc1|Schizos... 27 4.7
SPAC222.15 |meu13|SPAC821.01|Tat binding protein 1|Schizosacchar... 26 6.2
SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 26 6.2
SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces pom... 26 6.2
SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyc... 26 8.2
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 37.1 bits (82), Expect = 0.003
Identities = 18/49 (36%), Positives = 18/49 (36%)
Frame = +1
Query: 736 PXXXXXXPXXXXXPPPPPXPXXPXXXAPPXPPXXGGXXXPXPXXPPXPP 882
P P P PPP P PP PP G P P PP PP
Sbjct: 737 PAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP--PPPPP 783
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +2
Query: 758 PXXXXXPXPPPPPXXPXXRPPRXPPPXAGXPXPPPXXP 871
P P PPP P PP PP AG PPP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 30.3 bits (65), Expect = 0.38
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +1
Query: 775 PPPPPXPXXPXXXAPPXPPXXGGXXXPXPXXPPXPP 882
PPPPP P P P P PP PP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +2
Query: 758 PXXXXXPXPPPPPXXPXXRPPRX-PPPXA 841
P P PPPPP PP PPP A
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 1/42 (2%)
Frame = +3
Query: 714 ILPXXXPXXXXXXXPXXXXX-XPXPPXPXXXPXXGPPXPPXP 836
I+P P P P PP P GPP PP P
Sbjct: 740 IVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 26.2 bits (55), Expect = 6.2
Identities = 12/39 (30%), Positives = 12/39 (30%)
Frame = +3
Query: 720 PXXXPXXXXXXXPXXXXXXPXPPXPXXXPXXGPPXPPXP 836
P P P P PP P PP PP P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 35.9 bits (79), Expect = 0.008
Identities = 18/39 (46%), Positives = 18/39 (46%), Gaps = 1/39 (2%)
Frame = +2
Query: 758 PXXXXXPXPPPPPXXPXXRPPRXPPPXAGXP-XPPPXXP 871
P P PPPPP PP PP AG P PPP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPP-PPSAPPMPAGPPSAPPPPLP 1736
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 782 PPPPPXXPXXRPPRXPPPXAGXPXPPP 862
P P P RP PP P PPP
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPP 1709
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/35 (34%), Positives = 13/35 (37%)
Frame = +1
Query: 775 PPPPPXPXXPXXXAPPXPPXXGGXXXPXPXXPPXP 879
PP P P + P PP P P PP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/38 (31%), Positives = 12/38 (31%)
Frame = +2
Query: 758 PXXXXXPXPPPPPXXPXXRPPRXPPPXAGXPXPPPXXP 871
P P PP P P P PPP P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +1
Query: 775 PPPPPXPXXPXXXAPPXPPXXGGXXXPXPXXPPXPP 882
PPPPP P APP P P P PP
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAG--------PPSAPPPP 1734
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.9 bits (74), Expect = 0.031
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 782 PPPPPXXPXXRPPRXPPPXAGXPXPP 859
PPPPP P PP PPP P PP
Sbjct: 9 PPPPPPPPGFEPPSQPPP----PPPP 30
Score = 32.3 bits (70), Expect = 0.094
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 758 PXXXXXPXPPPPPXXPXXRPPRXPPP 835
P P PPPP P +PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 30.3 bits (65), Expect = 0.38
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 775 PPPPPXPXXPXXXAPPXPPXXG 840
PPPPP P PP PP G
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPPG 31
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +1
Query: 817 PPXPPXXGGXXXPXPXXPPXPP 882
PP PP G P PP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 791 PPXXPXXRPPRXPPPXAGXPXPPPXXP 871
PP P PP PPP P PP P
Sbjct: 5 PPGNP---PPPPPPPGFEPPSQPPPPP 28
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.5 bits (73), Expect = 0.041
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -2
Query: 870 GXXGGGXGXPAXGGGXRGGRXXGXXGGGGGXG 775
G GGG G G G RGG G G GG G
Sbjct: 34 GARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 30.3 bits (65), Expect = 0.38
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 870 GXXGGGXGXPAXGGGXRGGRXXGXXGGGGGXG 775
G GG G GG RGGR G GG G
Sbjct: 38 GGRGGARGGRGGRGGARGGRGGSSGGRGGAKG 69
Score = 29.9 bits (64), Expect = 0.50
Identities = 17/32 (53%), Positives = 17/32 (53%)
Frame = -2
Query: 870 GXXGGGXGXPAXGGGXRGGRXXGXXGGGGGXG 775
G GGG G A GGG RGG G G GG G
Sbjct: 26 GGFGGGRGG-ARGGG-RGGARGGRGGRGGARG 55
Score = 27.5 bits (58), Expect = 2.7
Identities = 15/33 (45%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Frame = -2
Query: 870 GXXGGGXGXPAXGGGXRGGRXXGXXGGG-GGXG 775
G GG G GG RGG G GG GG G
Sbjct: 16 GGRGGFNGGRGGFGGGRGGARGGGRGGARGGRG 48
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 870 GXXGGGXGXPAXGGGXRGGRXXGXXGGGGG 781
G GG G GG GGR G GG GG
Sbjct: 6 GSRGGRGGSRGGRGGFNGGR-GGFGGGRGG 34
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 32.7 bits (71), Expect = 0.071
Identities = 14/30 (46%), Positives = 15/30 (50%)
Frame = +2
Query: 782 PPPPPXXPXXRPPRXPPPXAGXPXPPPXXP 871
PP PP P RPP P + P PPP P
Sbjct: 230 PPIPPSIPSSRPPERVPSLSA-PAPPPIPP 258
Score = 29.5 bits (63), Expect = 0.67
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 776 PXPPPPPXXPXXRPPRXPPPXAGXPXPPP 862
P PPPPP PP P PPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 29.1 bits (62), Expect = 0.88
Identities = 12/33 (36%), Positives = 12/33 (36%)
Frame = +1
Query: 775 PPPPPXPXXPXXXAPPXPPXXGGXXXPXPXXPP 873
PPPPP P PP P P PP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +1
Query: 778 PPPPXPXXPXXXAPPXPPXXGGXXXPXPXXPPXP 879
PP P PP PP G P PP P
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 28.7 bits (61), Expect = 1.2
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = +2
Query: 782 PPPPPXXPXXRPPRXPPPXAGXPXPPPXXP 871
PPPPP P P G PPP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 3/38 (7%)
Frame = +1
Query: 778 PPPPXPXXPXXXAPPXPPXXGGXXX---PXPXXPPXPP 882
PP P P P AP PP P P P PP
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPP 425
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +2
Query: 776 PXPPPPPXXPXXRPPRXPPPXAGXPXPPP 862
P PPPP P P + P PPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 757 PXXXXXPPPPPXPXXPXXXAPPXPPXXGGXXXPXPXXPP 873
P PPPPP P P PP P PP
Sbjct: 355 PQGRSAPPPPPPRSAPSTGRQP-PPLSSSRAVSNPPAPP 392
Score = 26.6 bits (56), Expect = 4.7
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 2/40 (5%)
Frame = +2
Query: 758 PXXXXXPXPPP--PPXXPXXRPPRXPPPXAGXPXPPPXXP 871
P P PP PP P PP P P PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/52 (26%), Positives = 14/52 (26%)
Frame = +3
Query: 717 LPXXXPXXXXXXXPXXXXXXPXPPXPXXXPXXGPPXPPXPXRXXXPXPXXXP 872
LP P P P P P P PP P P P P
Sbjct: 431 LPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = -2
Query: 870 GXXGGGXGXPAXGGGXRGGRXXGXXGGGGGXGXXXXXG 757
G GG G P GG GG G G GGG G G
Sbjct: 235 GGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = -2
Query: 870 GXXGGGXGXPAXGGGXRGGRXXGXXGGGGGXG 775
G GG G P GG GG G G GGG G
Sbjct: 228 GGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG 259
Score = 27.5 bits (58), Expect = 2.7
Identities = 14/32 (43%), Positives = 14/32 (43%)
Frame = -2
Query: 870 GXXGGGXGXPAXGGGXRGGRXXGXXGGGGGXG 775
G GG G P G GG G G GGG G
Sbjct: 221 GGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLG 252
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -2
Query: 870 GXXGGGXGXPAXGGGXRGGRXXGXXGGGG 784
G GGG G P G G GG G GG G
Sbjct: 191 GGFGGGSGGPPPGPGGFGG--FGGFGGEG 217
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 30.7 bits (66), Expect = 0.29
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 776 PXPPPPPXXPXXRPPRXPPPXAGXPXPPP 862
P PPPP P PP P A P PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
Score = 26.6 bits (56), Expect = 4.7
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 782 PPPPPXXPXXRPPRXPPPXAGXPXPPPXXP 871
PPPPP P P PP A PP P
Sbjct: 1882 PPPPP--PMALPKAGPPSAAPTSALPPAGP 1909
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.50
Identities = 14/39 (35%), Positives = 15/39 (38%), Gaps = 4/39 (10%)
Frame = +2
Query: 758 PXXXXXPXPPPPPXXPXXRP----PRXPPPXAGXPXPPP 862
P P PPP P +P P PPP P P P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 776 PXPPPPPXXPXXRPPRXPPPXAGXPXPPP 862
P PPP P P P P P P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAP 1088
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 4/38 (10%)
Frame = +2
Query: 758 PXXXXXPXPPP----PPXXPXXRPPRXPPPXAGXPXPP 859
P P P P PP P P P P AG P P
Sbjct: 1193 PPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +2
Query: 776 PXPPPPPXXPXXRPPRXPPPXAGXPXPPPXXP 871
P PP P PP P +G P PP P
Sbjct: 1037 PSTAPPVPIPTSTPP-VPKSSSGAPSAPPPVP 1067
Score = 25.8 bits (54), Expect = 8.2
Identities = 14/34 (41%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Frame = +1
Query: 784 PPXPXXPXXXAPPXPPXXGGXXXPXP--XXPPXP 879
PP P P APP P G P P PP P
Sbjct: 1140 PPVPK-PSVAAPPVPAPSGAPPVPKPSVAAPPVP 1172
Score = 25.8 bits (54), Expect = 8.2
Identities = 16/36 (44%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Frame = +1
Query: 784 PPXPXXPXXXAPPXP-PXXGGXXXPXPXX--PPXPP 882
PP P P APP P P G P P PP PP
Sbjct: 1159 PPVPK-PSVAAPPVPAPSSGIPPVPKPAAGVPPVPP 1193
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.5 bits (63), Expect = 0.67
Identities = 15/29 (51%), Positives = 15/29 (51%)
Frame = -2
Query: 843 PAXGGGXRGGRXXGXXGGGGGXGXXXXXG 757
P GGG RGGR G GG GG G G
Sbjct: 443 PRTGGGSRGGR--GGFGGRGGFGGRGGFG 469
>SPAC1F3.10c |oct1||mitochondrial intermediate peptidase Oct1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 762
Score = 28.7 bits (61), Expect = 1.2
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -2
Query: 432 LGRALDVLPRLFQSLLGLAVRVSERSPGDSW 340
+G + L RLF SL GL ++ SPG+ W
Sbjct: 410 VGTVIQGLSRLFSSLYGLRFVPADISPGEVW 440
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 28.3 bits (60), Expect = 1.5
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 782 PPPPPXXPXXRPPRXPPPXAGXPXPPP 862
P PP RPP PP P P P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSP 154
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 778 PPPPXPXXPXXXAPPXPPXXGGXXXPXPXXPPXPP 882
PPP P P +PP P P P P PP
Sbjct: 172 PPPAQPAAP-VKSPPSAPSLPSAVPPMPPKVPPPP 205
Score = 27.5 bits (58), Expect = 2.7
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +2
Query: 782 PPPPPXXPXXRPPRXPPPXAGXPXPPPXXP 871
PP P P PP P + P PP P
Sbjct: 173 PPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.5 bits (58), Expect = 2.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 858 GGXGXPAXGGGXRGGRXXGXXGGGGG 781
GG GGG RGG G GG G
Sbjct: 163 GGGSRGGFGGGSRGGSRGGFRGGSRG 188
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 858 GGXGXPAXGGGXRGGRXXGXXGGGGG 781
GG GGG RGG G GG G
Sbjct: 155 GGNSRGGFGGGSRGGFGGGSRGGSRG 180
Score = 26.2 bits (55), Expect = 6.2
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 870 GXXGGGXGXPAXGGGXRGGRXXGXXGGGGG 781
G GG G GG RGG G GG GG
Sbjct: 145 GGRGGSRG--GFGGNSRGGFGGGSRGGFGG 172
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 27.1 bits (57), Expect = 3.6
Identities = 12/36 (33%), Positives = 13/36 (36%)
Frame = +1
Query: 775 PPPPPXPXXPXXXAPPXPPXXGGXXXPXPXXPPXPP 882
PPPPP P + PP P P PP
Sbjct: 207 PPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAPYPP 242
>SPAC31G5.21 |||human family 32A homolog|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 118
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/74 (22%), Positives = 32/74 (43%), Gaps = 3/74 (4%)
Frame = +2
Query: 170 RRDAPDFFKDIEHHTKEFHKTLEQQFNS---LTKSKDAQDFSKAWKDGSEFRAATAQRLR 340
++D+ + ++ H+ LE+ S + +SKD + F + QRL
Sbjct: 22 KKDSKKLAEKVQEHSSRDKSPLEENGVSTYQMLRSKDTDSAMPMTEAQKHFESVQEQRLL 81
Query: 341 QESPGERSETRTAR 382
Q++ ER +T R
Sbjct: 82 QKAKNERLKTHKDR 95
>SPBC1A4.03c |top2|ptr11|DNA topoisomerase II|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1485
Score = 26.6 bits (56), Expect = 4.7
Identities = 12/42 (28%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +2
Query: 176 DAPDFFKDIEHHTKEFHKTLEQ--QFNSLTKSKDAQDFSKAW 295
D +F D++ H K FH E+ + + +K D K W
Sbjct: 665 DMKSYFSDLDRHMKYFHAMQEKDAELIEMAFAKKKADVRKEW 706
>SPAC22F8.11 |plc1||phosphoinositide phospholipase C
Plc1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 899
Score = 26.6 bits (56), Expect = 4.7
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 170 RRDAPDFFKDIEHHTKEFHKTLEQQFNSLT 259
++ DFFK + ++ H TL ++ NSL+
Sbjct: 56 KKSEQDFFKMLSSRDRDAHSTLRKRSNSLS 85
>SPAC222.15 |meu13|SPAC821.01|Tat binding protein
1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 216
Score = 26.2 bits (55), Expect = 6.2
Identities = 16/56 (28%), Positives = 28/56 (50%)
Frame = +2
Query: 452 LNVEKNATALREKLQAAVQNTVQESQKLAKKVSSNVQETNEKLAPKIKAAYXDFAK 619
LN + +REK+Q+ + + S KL + V++ +++ K Y DFAK
Sbjct: 120 LNNSLSPAEIREKIQSIDKEIEETSSKLESLRNGTVKQISKEAMQKTDKNY-DFAK 174
>SPAPB1A10.08 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 412
Score = 26.2 bits (55), Expect = 6.2
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = +2
Query: 83 PHSVSRQYIMAAKFVVLFACIALAQGAMVRRDAPDFFKDIEHHTKEFHKTLEQQFNSLTK 262
P S S + A + L + V R F + +EH+ K+LE+Q + L +
Sbjct: 171 PSSSSCNLVNANSLDIYLNINNLKKSKSVPRLRGQFMEPVEHN-HPLSKSLEEQSSFLEQ 229
Query: 263 SKDA 274
SKDA
Sbjct: 230 SKDA 233
>SPBC11B10.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 204
Score = 26.2 bits (55), Expect = 6.2
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 785 PPPPXXPXXRPPRXPPP 835
PPPP PP PPP
Sbjct: 48 PPPPSVDHSAPPSGPPP 64
>SPCC830.07c |psi1|psi|DNAJ domain protein Psi1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 379
Score = 25.8 bits (54), Expect = 8.2
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = -2
Query: 858 GGXGXPAXGGGXRGGRXXGXXGGGGG 781
GG G GGG GG GGG G
Sbjct: 157 GGFGTRTRGGGMPGGFANMFGGGGAG 182
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,701,453
Number of Sequences: 5004
Number of extensions: 48056
Number of successful extensions: 508
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 339
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 444486180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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