Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_N18
         (872 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49937-6|CAA90185.2|  453|Caenorhabditis elegans Hypothetical pr...    31   1.1  
Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical p...    30   1.9  
Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical pr...    29   4.3  
Z34802-8|CAH10787.1|  704|Caenorhabditis elegans Hypothetical pr...    28   7.6  
Z34802-7|CAA84338.2|  828|Caenorhabditis elegans Hypothetical pr...    28   7.6  

>Z49937-6|CAA90185.2|  453|Caenorhabditis elegans Hypothetical
           protein F14F3.3 protein.
          Length = 453

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +3

Query: 219 ILQPTMFEDIKEIAKEYNIEKSCDKYMNVDVVK-QFMEMYKMGMLPRGETFVHTNELQME 395
           I+ PT      ++    NIE S D  +N+D+ K +F + ++ GM     +      L + 
Sbjct: 272 IMGPTDLNAFDKLKTRENIEMSSDAIVNLDIPKVEFSDGFRDGMKAWNRSVQTWLALYVH 331

Query: 396 EAVKVFRV 419
             VKV RV
Sbjct: 332 SRVKVMRV 339


>Z81542-10|CAB04419.4|  411|Caenorhabditis elegans Hypothetical
           protein F49A5.7 protein.
          Length = 411

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
 Frame = +1

Query: 481 STEACSSTLLLPRASTEPTARVS-TCPLLTRSIPTSSLTAMSSVKPL 618
           + EA SST LL   ST  TA +S T   ++RSI   + TA ++++PL
Sbjct: 91  TNEASSSTKLL---STSSTAEISSTTRTVSRSIKPETSTASTTIRPL 134


>Z92815-4|CAB07294.2| 2175|Caenorhabditis elegans Hypothetical
           protein W01F3.3 protein.
          Length = 2175

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 22/75 (29%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
 Frame = +1

Query: 472 EKGSTEACSSTLLLPRASTEP---TARVST-CPLLTRSIPTSSLTAMSSVKPL**R*LKP 639
           E  +TEA ++T   P  +T     T  ++T  P  T  + T+  T  +       R + P
Sbjct: 240 ESPTTEASTTTTEAPTTTTSEEVTTTEITTEAPTTTEEVTTTETTIEAQTTTTTER-MSP 298

Query: 640 PRTRSSGNTTASPVT 684
             T++S  TTA P T
Sbjct: 299 STTKTSTTTTAKPTT 313


>Z77657-6|CAB01150.2|  607|Caenorhabditis elegans Hypothetical
           protein F08H9.1 protein.
          Length = 607

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 11/20 (55%), Positives = 16/20 (80%)
 Frame = -1

Query: 461 RSPHENIEVLSVVEDSEDFD 402
           R+P+ENI++L   +DSED D
Sbjct: 581 RAPYENIDLLLSTDDSEDID 600


>Z34802-8|CAH10787.1|  704|Caenorhabditis elegans Hypothetical
           protein M88.5b protein.
          Length = 704

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 707 QSXPNCSSVTGDAVVFPEDRVLGGFSHLHHKGFTDDMAVNEEVG 576
           Q+      +TG  V  PE+   GG  + H  G  +DM +   +G
Sbjct: 578 QNVRELQRITGAVVKIPEEERNGGEVYRHDDGLEEDMTMIRTIG 621


>Z34802-7|CAA84338.2|  828|Caenorhabditis elegans Hypothetical
           protein M88.5a protein.
          Length = 828

 Score = 28.3 bits (60), Expect = 7.6
 Identities = 13/44 (29%), Positives = 20/44 (45%)
 Frame = -1

Query: 707 QSXPNCSSVTGDAVVFPEDRVLGGFSHLHHKGFTDDMAVNEEVG 576
           Q+      +TG  V  PE+   GG  + H  G  +DM +   +G
Sbjct: 702 QNVRELQRITGAVVKIPEEERNGGEVYRHDDGLEEDMTMIRTIG 745


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,979,742
Number of Sequences: 27780
Number of extensions: 363082
Number of successful extensions: 888
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 888
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2192413762
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)