Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_N17
(950 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 31 0.31
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 29 0.73
SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr 3|... 29 1.3
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 27 5.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 5.1
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 6.8
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 6.8
SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces ... 26 9.0
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 26 9.0
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 30.7 bits (66), Expect = 0.31
Identities = 16/48 (33%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = +2
Query: 803 PXFPPXTP-PXXTXPGXPXPXGXPRGXFPAXSPPXGNPGXXXQVPPPP 943
P PP P P P P P G P P+ PP P P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
Score = 29.5 bits (63), Expect = 0.73
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = +2
Query: 800 PPXFPPXTPPXXTXPGXPXPXGXPRGXFPA-XSPPXGNPGXXXQVPPP 940
P PP P P P P G P P+ +PP P VP P
Sbjct: 1117 PSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 28.3 bits (60), Expect = 1.7
Identities = 15/48 (31%), Positives = 18/48 (37%)
Frame = +2
Query: 800 PPXFPPXTPPXXTXPGXPXPXGXPRGXFPAXSPPXGNPGXXXQVPPPP 943
P PP P P P P G P P+ + P P +PP P
Sbjct: 1136 PSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPP-VPAPSSGIPPVP 1182
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 1/44 (2%)
Frame = +2
Query: 812 PPXTPPXXTXPGXPXPXGXPRGXFPA-XSPPXGNPGXXXQVPPP 940
PP P P P P G P P+ +PP P VP P
Sbjct: 1102 PPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 27.9 bits (59), Expect = 2.2
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 1/45 (2%)
Frame = +2
Query: 812 PPXTPPXXTXPGXPXPX-GXPRGXFPAXSPPXGNPGXXXQVPPPP 943
PP P P P P G P P+ +PP P PPP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 27.1 bits (57), Expect = 3.9
Identities = 13/44 (29%), Positives = 14/44 (31%)
Frame = +2
Query: 812 PPXTPPXXTXPGXPXPXGXPRGXFPAXSPPXGNPGXXXQVPPPP 943
PP P P P P P P +PP PPP
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPP 1065
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/44 (31%), Positives = 17/44 (38%)
Frame = +2
Query: 812 PPXTPPXXTXPGXPXPXGXPRGXFPAXSPPXGNPGXXXQVPPPP 943
PP PP P G P P+ +PP P +PP P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAG--LPPVP 1230
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 29.5 bits (63), Expect = 0.73
Identities = 17/49 (34%), Positives = 17/49 (34%), Gaps = 1/49 (2%)
Frame = +2
Query: 800 PPXFPPXTPPXXTXPGXPXPXGXP-RGXFPAXSPPXGNPGXXXQVPPPP 943
PP P P P P P G P PP G G PPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.1 bits (62), Expect = 0.96
Identities = 16/47 (34%), Positives = 16/47 (34%), Gaps = 3/47 (6%)
Frame = +2
Query: 812 PPXTPPXXTXPGX---PXPXGXPRGXFPAXSPPXGNPGXXXQVPPPP 943
PP PP P P P P PP PG PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
>SPCC14G10.04 |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 497
Score = 28.7 bits (61), Expect = 1.3
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +2
Query: 800 PPXFPPXTPPXXTXPGXPXPXGXPRGXFPAXSPPXGNPGXXXQVPPPP 943
PP F P P P G RG S P PG Q P P
Sbjct: 423 PPGFSTNAPKAVKSPEISAPPGLYRGLSSGASIPSAPPGFGYQQPSFP 470
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 26.6 bits (56), Expect = 5.1
Identities = 14/48 (29%), Positives = 15/48 (31%)
Frame = +2
Query: 800 PPXFPPXTPPXXTXPGXPXPXGXPRGXFPAXSPPXGNPGXXXQVPPPP 943
PP TPP P P P P +PP P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.6 bits (56), Expect = 5.1
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 6/46 (13%)
Frame = +2
Query: 815 PXTPPXXTXPGXPXPXGXPRGXFPAXSPP------XGNPGXXXQVP 934
P PP P P P P PP GNPG VP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVP 1927
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 6.8
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +2
Query: 812 PPXTPPXXTXPGXPXPXGXPRGXFPAXSPPXGNPGXXXQVPPPP 943
P PP P P P P S N G +PPPP
Sbjct: 234 PLPAPPPPPPPTLP-PQSTNTSQLPMPSRNVNNLGSQVNIPPPP 276
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.2 bits (55), Expect = 6.8
Identities = 16/48 (33%), Positives = 18/48 (37%), Gaps = 1/48 (2%)
Frame = +2
Query: 803 PXFPPXTPPXXTXPGXPXPXGXPRGXFP-AXSPPXGNPGXXXQVPPPP 943
P P PP + P P P A S P P +VPPPP
Sbjct: 158 PPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPP 205
>SPBC649.04 |uvi15||UV-induced protein Uvi15|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 87
Score = 25.8 bits (54), Expect = 9.0
Identities = 12/31 (38%), Positives = 14/31 (45%), Gaps = 2/31 (6%)
Frame = +2
Query: 812 PPXTPPXXTXP--GXPXPXGXPRGXFPAXSP 898
P PP P G P G P+G +PA P
Sbjct: 24 PNYYPPQQNYPQQGYAPPQGYPQGGYPAQQP 54
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 25.8 bits (54), Expect = 9.0
Identities = 13/43 (30%), Positives = 14/43 (32%)
Frame = +2
Query: 812 PPXTPPXXTXPGXPXPXGXPRGXFPAXSPPXGNPGXXXQVPPP 940
PP PP P PR P P N +PPP
Sbjct: 253 PPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,138,222
Number of Sequences: 5004
Number of extensions: 26103
Number of successful extensions: 68
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 485316198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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