Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_N16
(900 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z18284-1|CAA79158.1| 398|Homo sapiens Oct-6 transcription facto... 34 0.61
L26494-1|AAA59965.1| 448|Homo sapiens oct-6 protein. 34 0.61
AL139158-1|CAI23136.1| 451|Homo sapiens POU domain, class 3, tr... 34 0.61
AK027798-1|BAB55376.1| 491|Homo sapiens protein ( Homo sapiens ... 32 2.5
BC114928-1|AAI14929.1| 562|Homo sapiens TMPRSS13 protein protein. 31 4.3
AY190317-1|AAO38062.1| 558|Homo sapiens transmembrane protease ... 31 4.3
AB048796-1|BAB39741.2| 581|Homo sapiens membrane-type mosaic se... 31 4.3
>Z18284-1|CAA79158.1| 398|Homo sapiens Oct-6 transcription factor
protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.61
Identities = 36/128 (28%), Positives = 47/128 (36%), Gaps = 9/128 (7%)
Frame = -3
Query: 544 HVVHSAAQRVEVGRVGNGAGRVPDRERL---GAQVVXVIVEQVDLA--CDAELLPEAGNA 380
H+ H A GR +G G RL GA Q A + P G +
Sbjct: 36 HLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGAS 95
Query: 379 GPGQAQPVPVYVVQSEPCGGSAELVAVVEVGG---PDGAEHVLVVAG-ERDLQGGPGGSV 212
G Q QP+ +Y + P GG L ++ GG G H L G E L+ P +
Sbjct: 96 GGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHL 155
Query: 211 RVHCEAAG 188
H A G
Sbjct: 156 GAHGHAHG 163
>L26494-1|AAA59965.1| 448|Homo sapiens oct-6 protein.
Length = 448
Score = 34.3 bits (75), Expect = 0.61
Identities = 36/128 (28%), Positives = 47/128 (36%), Gaps = 9/128 (7%)
Frame = -3
Query: 544 HVVHSAAQRVEVGRVGNGAGRVPDRERL---GAQVVXVIVEQVDLA--CDAELLPEAGNA 380
H+ H A GR +G G RL GA Q A + P G +
Sbjct: 86 HLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGAS 145
Query: 379 GPGQAQPVPVYVVQSEPCGGSAELVAVVEVGG---PDGAEHVLVVAG-ERDLQGGPGGSV 212
G Q QP+ +Y + P GG L ++ GG G H L G E L+ P +
Sbjct: 146 GGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHL 205
Query: 211 RVHCEAAG 188
H A G
Sbjct: 206 GAHGHAHG 213
>AL139158-1|CAI23136.1| 451|Homo sapiens POU domain, class 3,
transcription factor 1 protein.
Length = 451
Score = 34.3 bits (75), Expect = 0.61
Identities = 36/128 (28%), Positives = 47/128 (36%), Gaps = 9/128 (7%)
Frame = -3
Query: 544 HVVHSAAQRVEVGRVGNGAGRVPDRERL---GAQVVXVIVEQVDLA--CDAELLPEAGNA 380
H+ H A GR +G G RL GA Q A + P G +
Sbjct: 89 HLEHGKAGGGGTGRADDGGGGGGFHARLVHQGAAHAGAAWAQGSTAHHLGPAMSPSPGAS 148
Query: 379 GPGQAQPVPVYVVQSEPCGGSAELVAVVEVGG---PDGAEHVLVVAG-ERDLQGGPGGSV 212
G Q QP+ +Y + P GG L ++ GG G H L G E L+ P +
Sbjct: 149 GGHQPQPLGLYAQAAYPGGGGGGLAGMLAAGGGGAGPGLHHALHEDGHEAQLEPSPPPHL 208
Query: 211 RVHCEAAG 188
H A G
Sbjct: 209 GAHGHAHG 216
>AK027798-1|BAB55376.1| 491|Homo sapiens protein ( Homo sapiens
cDNA FLJ14892 fis, clone PLACE1004270, weakly similar to
TRANSMEMBRANE PROTEASE, SERINE 2 (EC 3.4.21.-). ).
Length = 491
Score = 32.3 bits (70), Expect = 2.5
Identities = 31/92 (33%), Positives = 39/92 (42%), Gaps = 6/92 (6%)
Frame = -1
Query: 411 TPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPVR 244
TP PG P + SP + +RASPA A+LS S +S+ + S S VR
Sbjct: 64 TPPGRASPGRASPAQASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVR 123
Query: 243 GTFRAAPEVPSEFTVKLPA--CLRARVGTCLP 154
T A + S PA R GT LP
Sbjct: 124 ATPVGAVPIRSSPARSAPATRATRESPGTSLP 155
>BC114928-1|AAI14929.1| 562|Homo sapiens TMPRSS13 protein protein.
Length = 562
Score = 31.5 bits (68), Expect = 4.3
Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Frame = -1
Query: 411 TPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPVR 244
+P+ +P PG P R SP + +RASPA A+LS S +S+ + S S VR
Sbjct: 60 SPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVR 118
Query: 243 GTFRAAPEVPSEFTVKLPA--CLRARVGTCLP 154
T A + S PA R GT LP
Sbjct: 119 ATPVGAVPIRSSPARSAPATRATRESPGTSLP 150
>AY190317-1|AAO38062.1| 558|Homo sapiens transmembrane protease
serine 6 protein.
Length = 558
Score = 31.5 bits (68), Expect = 4.3
Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Frame = -1
Query: 411 TPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPVR 244
+P+ +P PG P R SP + +RASPA A+LS S +S+ + S S VR
Sbjct: 60 SPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVR 118
Query: 243 GTFRAAPEVPSEFTVKLPA--CLRARVGTCLP 154
T A + S PA R GT LP
Sbjct: 119 ATPVGAVPIRSSPARSAPATRATRESPGTSLP 150
>AB048796-1|BAB39741.2| 581|Homo sapiens membrane-type mosaic
serine protease protein.
Length = 581
Score = 31.5 bits (68), Expect = 4.3
Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 6/92 (6%)
Frame = -1
Query: 411 TPSCSPKPGMRVPVRLSPCPFTLSRASPAEAALSLWRSLKSADPMALSTFLS----LPVR 244
+P+ +P PG P R SP + +RASPA A+LS S +S+ + S S VR
Sbjct: 60 SPAGTP-PGRASPGRASPAQASPARASPALASLSRSSSGRSSSARSASVTTSPTRVYLVR 118
Query: 243 GTFRAAPEVPSEFTVKLPA--CLRARVGTCLP 154
T A + S PA R GT LP
Sbjct: 119 ATPVGAVPIRSSPARSAPATRATRESPGTSLP 150
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 107,668,004
Number of Sequences: 237096
Number of extensions: 2182255
Number of successful extensions: 16559
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16097
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16540
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11603768198
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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