Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_N16
         (900 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family p...    24   1.6  
AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic ac...    23   2.9  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   8.8  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   8.8  

>AF134820-1|AAD40235.1|  166|Apis mellifera putative Ets-family
           protein protein.
          Length = 166

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 11/37 (29%), Positives = 22/37 (59%)
 Frame = +2

Query: 413 AGKVNLFHNNXHDLSAKAFAIRNSPSAIPNAPNFNTL 523
           +G++N+  ++ HD S + +A  + P  I + PN + L
Sbjct: 68  SGQLNIISSD-HDDSDEEYAANSQPPRITSVPNTSRL 103


>AY569781-1|AAS75781.1|  461|Apis mellifera neuronal nicotinic
           acetylcholine Apisa7-2 subunit protein.
          Length = 461

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +2

Query: 323 SAGLALDNVNGHGLSLTGTRIPGFGEQL 406
           ++ LA+  +N H   + GTR+PG    L
Sbjct: 289 ASALAVVTLNLHHRGVRGTRVPGIVRSL 316


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -3

Query: 682 LKPGVXVERTGPEIGTGSAY 623
           L PGV V   G EIG    Y
Sbjct: 370 LLPGVAVNYYGDEIGMSDTY 389


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 8.8
 Identities = 10/20 (50%), Positives = 10/20 (50%)
 Frame = -3

Query: 682 LKPGVXVERTGPEIGTGSAY 623
           L PGV V   G EIG    Y
Sbjct: 370 LLPGVAVNYYGDEIGMSDTY 389


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,685
Number of Sequences: 438
Number of extensions: 3418
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)