Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_N15
(892 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983 33 0.40
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 30 2.1
05_06_0005 + 24802843-24803101,24804086-24804333,24804417-248045... 30 2.1
06_03_1121 + 27767707-27768065,27768612-27769034,27770013-277701... 29 3.8
11_01_0429 - 3288081-3288781,3290038-3290293 29 5.0
03_05_0890 - 28547462-28547545,28548451-28548528,28548641-285488... 29 5.0
02_05_0686 - 30900748-30902167,30903442-30904742 29 5.0
01_05_0679 + 24230740-24230929,24231330-24231461,24231710-242319... 29 5.0
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 29 6.6
07_03_1136 + 24218601-24218734,24218769-24219906 28 8.7
05_03_0490 + 14667337-14667533,14667902-14668064 28 8.7
03_05_0825 - 27986393-27986767,27987541-27987625,27987936-279880... 28 8.7
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 28 8.7
>08_02_1403 + 26811020-26811146,26813351-26813609,26814932-26814983
Length = 145
Score = 32.7 bits (71), Expect = 0.40
Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 6/67 (8%)
Frame = +3
Query: 654 LGXXLSRPXPFXNPXXAXXFFFPXPGXXGXGGVLPPXKXP------PXPPGEXGXFXFXG 815
+G S P P+ P A +P G GV PP + P P PPG G F G
Sbjct: 42 VGYPQSGPYPYPPPSGAV---YPPQGYPSSHGVYPPPQGPYPPPHQPPPPGYQGYFN-QG 97
Query: 816 PPPXSPP 836
P PP
Sbjct: 98 QQPYYPP 104
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 30.3 bits (65), Expect = 2.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 756 PPXKXPPXPPGEXGXFXFXGPPPXSPP 836
PP PP PP F PPP PP
Sbjct: 544 PPPPPPPPPPPSGNKPAFSPPPPPPPP 570
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 756 PPXKXPPXPPGEXGXFXFXGPPPXSPP 836
PP PP P G F PPP PP
Sbjct: 546 PPPPPPPPPSGNKPAFSPPPPPPPPPP 572
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +3
Query: 756 PPXKXPPXPPGEXGXFXFXGPPPXSPP 836
PP PP PP + PPP PP
Sbjct: 565 PPPPPPPPPPLPQSNYASSQPPPPPPP 591
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/63 (30%), Positives = 19/63 (30%), Gaps = 6/63 (9%)
Frame = +3
Query: 666 LSRPXPFXNPXXAXXFFFPXPGXXGXGGVLPPXKXPPXPPGE------XGXFXFXGPPPX 827
L P P P P P G G P PP PP GPPP
Sbjct: 633 LPPPPPPPPPPSLPNRLVPPPPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPP 692
Query: 828 SPP 836
PP
Sbjct: 693 PPP 695
>05_06_0005 + 24802843-24803101,24804086-24804333,24804417-24804572,
24804956-24805114,24805862-24805929,24806044-24806433,
24806515-24806563,24806636-24806788,24807416-24807589,
24808207-24808362,24808705-24808756,24808830-24808988,
24809058-24809094,24809218-24809252,24809349-24809400,
24809614-24809663,24810590-24811924,24812688-24812825,
24812907-24812957,24813081-24814237
Length = 1625
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/75 (30%), Positives = 27/75 (36%), Gaps = 2/75 (2%)
Frame = -1
Query: 889 GKTXXPXPXXXGXXXVXXGGEXGGGPXKXKXPXSPGGXGGXXXGGRTPPXPXXPG--XGK 716
GK P + GG GGG K K + GG G TP G G+
Sbjct: 1478 GKNNGNNPWGAPADSMTGGGSGGGGSWKNKTEDTWNSSGGTRDSGTTPGKSSWGGSEDGQ 1537
Query: 715 KKXXAXXGFXNGXGR 671
KK + G G GR
Sbjct: 1538 KKEGS-WGKSEGSGR 1551
>06_03_1121 +
27767707-27768065,27768612-27769034,27770013-27770175,
27770271-27770381,27770895-27770963,27771117-27771203,
27771967-27772752
Length = 665
Score = 29.5 bits (63), Expect = 3.8
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = +3
Query: 657 GXXLSRPXPFXNPXXAXXFFFPXPGXXGXGGVLPPXKXPPXPPGEXGXF 803
G P PF P F PG GG +P P PP G F
Sbjct: 500 GGGFGMPDPFGVPRGFPPFGPRFPGDFARGGPMPGMVFPGRPPQPGGMF 548
>11_01_0429 - 3288081-3288781,3290038-3290293
Length = 318
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/39 (38%), Positives = 16/39 (41%)
Frame = -1
Query: 835 GGEXGGGPXKXKXPXSPGGXGGXXXGGRTPPXPXXPGXG 719
G E GG P GG GG G +PP PG G
Sbjct: 270 GHELGGNEANLARPPESGGAGGDGGRGSSPPV-TWPGYG 307
>03_05_0890 - 28547462-28547545,28548451-28548528,28548641-28548814,
28548902-28548958,28549065-28549116,28549907-28549995,
28550259-28550344,28550427-28550637,28551790-28551882,
28551958-28552098,28552175-28552267,28553879-28554113,
28554263-28554435,28555234-28556571,28556668-28556853,
28557625-28557713,28557756-28557905,28557951-28558596
Length = 1324
Score = 29.1 bits (62), Expect = 5.0
Identities = 19/64 (29%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Frame = -1
Query: 190 RIYAIVFFRSISFDECMHIGEADSQQDNQQLVHFGYLRTS----SRIGYKNHHSNLKEFP 23
RIY ++ + MHI D + DN + H G+++ + S++G N +L P
Sbjct: 1011 RIYLAEVVLALEYLHSMHIVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSG-P 1069
Query: 22 IVSG 11
VSG
Sbjct: 1070 AVSG 1073
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 756 PPXKXPPXPPGEXGXFXFXGPPPXSPPXXTXXXP 857
PP K PP PP G PPP PP P
Sbjct: 348 PPAKGPPPPPPPKG----PSPPPPPPPGGKKGGP 377
>01_05_0679 +
24230740-24230929,24231330-24231461,24231710-24231977,
24232170-24232388,24233538-24233673,24233899-24234147,
24234783-24235100
Length = 503
Score = 29.1 bits (62), Expect = 5.0
Identities = 16/52 (30%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Frame = +2
Query: 182 INTLAESAKKTIEELR--EKVESALAPETVKKNFGTMVDSFNEFYKNLKPAE 331
++ E A+K E L+ +K +L PE +K+ F +++ +F +F L+P E
Sbjct: 254 VHATLEEARKFNEALQRWDKNAVSLVPEGLKRFFLSIMSNFRDFEDELEPHE 305
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +3
Query: 756 PPXKXPPXPPGEXGXFXFXGPPPXSPP 836
P PP PPG+ G GPPP PP
Sbjct: 926 PGAPPPPPPPGKPG-----GPPPPPPP 947
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/30 (46%), Positives = 16/30 (53%)
Frame = -1
Query: 835 GGEXGGGPXKXKXPXSPGGXGGXXXGGRTP 746
GG GGGP + +PGG GG GR P
Sbjct: 175 GGGGGGGPGR-----APGGGGGGGGPGRAP 199
>05_03_0490 + 14667337-14667533,14667902-14668064
Length = 119
Score = 28.3 bits (60), Expect = 8.7
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 823 GGGPXKXKXPXSPGGXGGXXXGGRTPP 743
GGG S GG GG GGR PP
Sbjct: 2 GGGGALLSTRSSRGGGGGDCGGGRRPP 28
>03_05_0825 -
27986393-27986767,27987541-27987625,27987936-27988036,
27988144-27988227,27988868-27988939,27989203-27989319,
27989386-27989526,27989951-27990122,27990324-27990372,
27990773-27990821,27991240-27991270,27991301-27991371
Length = 448
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/26 (38%), Positives = 19/26 (73%)
Frame = +2
Query: 164 PKEDNSINTLAESAKKTIEELREKVE 241
PKE ++ T+A + +KT EE+R +++
Sbjct: 91 PKESSTATTMAAATEKTAEEIRRELQ 116
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 28.3 bits (60), Expect = 8.7
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 756 PPXKXPPXPPGEXGXFXFXGPPPXSPPXXTXXXPXXXGXGXXVFP 890
PP PP PPP SPP T P G P
Sbjct: 1136 PPSSTSSSPPSSQSPPPGSSPPPASPPPSTPSAPPTNSSGSAPSP 1180
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,745,111
Number of Sequences: 37544
Number of extensions: 409371
Number of successful extensions: 1500
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1405
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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