Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_N15
(892 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 36 0.029
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 36 0.029
Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical pr... 32 0.63
Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical pr... 31 1.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 30 1.9
AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen prot... 30 1.9
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 30 2.6
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 29 3.4
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 29 3.4
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 29 3.4
AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen prot... 29 3.4
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 4.5
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 4.5
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 29 4.5
Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical pr... 29 5.9
AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen prot... 29 5.9
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 5.9
Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 7.8
Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical pr... 28 7.8
U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter... 28 7.8
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 36.3 bits (80), Expect = 0.029
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 720 PXPGXXGXGGVLPPXKXPPXPPGEXGXFXFXGPPPXSPP 836
P P G GG +PP PP PG+ PPP PP
Sbjct: 662 PVPPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPP--PP 698
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 36.3 bits (80), Expect = 0.029
Identities = 16/39 (41%), Positives = 18/39 (46%)
Frame = +3
Query: 720 PXPGXXGXGGVLPPXKXPPXPPGEXGXFXFXGPPPXSPP 836
P P G GG +PP PP PG+ PPP PP
Sbjct: 662 PVPPPGGLGGFMPPPPPPPPMPGDLSSLLAAAPPP--PP 698
>Z30317-2|CAA82968.2| 1142|Caenorhabditis elegans Hypothetical protein
T16G12.5 protein.
Length = 1142
Score = 31.9 bits (69), Expect = 0.63
Identities = 19/60 (31%), Positives = 28/60 (46%), Gaps = 4/60 (6%)
Frame = +2
Query: 164 PKEDNSINTLAESAKKTIEELREKVESALAP----ETVKKNFGTMVDSFNEFYKNLKPAE 331
P ED S N + AKK + +L+ V AP T ++ + VD NE+ + L E
Sbjct: 834 PSEDVSFNLAVDEAKKLLRDLKIDVNQVNAPTLPQRTDRQRYNQQVDVCNEWIEELHDDE 893
>Z73425-2|CAA97788.1| 1126|Caenorhabditis elegans Hypothetical
protein F12F6.6 protein.
Length = 1126
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 714 FFPXPGXXGXGGVLPPXKXPPXPPGEXGXFXFXGPPPXSPPXXTXXXPXXXG 869
F P G G G PP P PG G F P P P P G
Sbjct: 285 FPPGQGGPGMPGSFPPGAPGPGGPGMPGSFAPGAPGPGGPGGYPSGGPGMPG 336
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 30.3 bits (65), Expect = 1.9
Identities = 16/39 (41%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Frame = -1
Query: 835 GGEXGGGPXKXKXPXSPGGXG--GXXXGGRTPPXPXXPG 725
GG G GP P +PG G GG PP P PG
Sbjct: 404 GGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPG 442
Score = 29.5 bits (63), Expect = 3.4
Identities = 16/54 (29%), Positives = 17/54 (31%)
Frame = +3
Query: 714 FFPXPGXXGXGGVLPPXKXPPXPPGEXGXFXFXGPPPXSPPXXTXXXPXXXGXG 875
F P P G PP P G G + PPP P P G G
Sbjct: 378 FAPPPQSGPPGAFAPPPSAFGAPQGPGGPGGYGPPPPGGPGAPGSYGPPQGGPG 431
>AF003139-6|AAB54156.1| 327|Caenorhabditis elegans Collagen protein
45 protein.
Length = 327
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/37 (40%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +3
Query: 726 PGXXGXGGVLPPXKXPPXPPGEXGXFXFXGPP-PXSP 833
PG G G + PP PPG G GPP P P
Sbjct: 236 PGETGDHGKTIAGEAPPGPPGRQGEMGPQGPPGPPGP 272
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/37 (43%), Positives = 17/37 (45%)
Frame = +3
Query: 726 PGXXGXGGVLPPXKXPPXPPGEXGXFXFXGPPPXSPP 836
PG G G PP PP PPG+ G P P PP
Sbjct: 248 PGGPGPAG--PPG--PPGPPGQDGSGGAAQPGPPGPP 280
Score = 29.5 bits (63), Expect = 3.4
Identities = 19/53 (35%), Positives = 20/53 (37%), Gaps = 5/53 (9%)
Frame = +3
Query: 726 PGXXGXGGVLPPXKXPPXPPGEXGXFXFXGPP-----PXSPPXXTXXXPXXXG 869
PG G G PP PP PPG G G P P +P T P G
Sbjct: 201 PGPDGDAGS-PPPPGPPGPPGPPGNDGQPGAPGQDGQPGAPGTNTVNSPGGPG 252
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = +3
Query: 720 PXPGXXGXGGVLPPXKXPPXPPGEXGXFXFXGPPPXSPP 836
P P GG PP PP P G G GPPP PP
Sbjct: 758 PPPPPPPPGGC-PPPPPPPPPGGFKG-----GPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 744 GGVLPPXKXPPXPPGEXGXFXFXGPPPXSPP 836
GG+ P PP PP G G PP PP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = +2
Query: 692 PPXGXXFFFSXPXXXXXXXXSPPXXXTPPXPXGXGXF-XFXGXPSPFPPPXXXXXP 856
PP G P PP PP P G G P P PPP P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = +3
Query: 720 PXPGXXGXGGVLPPXKXPPXPPGEXGXFXFXGPPPXSPP 836
P P GG PP PP P G G GPPP PP
Sbjct: 758 PPPPPPPPGGC-PPPPPPPPPGGFKG-----GPPPPPPP 790
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 744 GGVLPPXKXPPXPPGEXGXFXFXGPPPXSPP 836
GG+ P PP PP G G PP PP
Sbjct: 733 GGLPPITGGPPPPPPPGGLPPISGGPPPPPP 763
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = +2
Query: 692 PPXGXXFFFSXPXXXXXXXXSPPXXXTPPXPXGXGXF-XFXGXPSPFPPPXXXXXP 856
PP G P PP PP P G G P P PPP P
Sbjct: 715 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 770
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 29.5 bits (63), Expect = 3.4
Identities = 17/39 (43%), Positives = 17/39 (43%)
Frame = +3
Query: 720 PXPGXXGXGGVLPPXKXPPXPPGEXGXFXFXGPPPXSPP 836
P P GG PP PP P G G GPPP PP
Sbjct: 341 PPPPPPPPGGC-PPPPPPPPPGGFKG-----GPPPPPPP 373
Score = 29.1 bits (62), Expect = 4.5
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +3
Query: 744 GGVLPPXKXPPXPPGEXGXFXFXGPPPXSPP 836
GG+ P PP PP G G PP PP
Sbjct: 316 GGLPPITGGPPPPPPPGGLPPISGGPPPPPP 346
Score = 28.7 bits (61), Expect = 5.9
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = +2
Query: 692 PPXGXXFFFSXPXXXXXXXXSPPXXXTPPXPXGXGXF-XFXGXPSPFPPPXXXXXP 856
PP G P PP PP P G G P P PPP P
Sbjct: 298 PPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPP 353
>AF040646-1|AAK31537.1| 530|Caenorhabditis elegans Collagen protein
70 protein.
Length = 530
Score = 29.5 bits (63), Expect = 3.4
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -1
Query: 820 GGPXKXKXPXSPGGXG--GXXXGGRTPPXPXXPG 725
GGP P +PGG G G G TP P PG
Sbjct: 116 GGPGTPGGPGNPGGLGGPGNPGGPGTPGGPGTPG 149
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +3
Query: 681 PFXNPXXAXXFFFPXPGXXGXGGVLPPXKXPPXPPGEX-GXFXFXGPPPXSPP 836
P P P P G+ PP PP PPG G G PP PP
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPP--PPPPPGRTPGPPGMPGMPPPPPP 322
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +3
Query: 720 PXPGXX-GXGGVLPPXKXPPXPPGEXGXFXFXGPPPXSPP 836
P PG G G+ P PP PP G G PP PP
Sbjct: 302 PPPGRTPGPPGM--PGMPPPPPPSRFGPPGMGGMPPPPPP 339
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.5
Identities = 18/53 (33%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +3
Query: 681 PFXNPXXAXXFFFPXPGXXGXGGVLPPXKXPPXPPGEX-GXFXFXGPPPXSPP 836
P P P P G+ PP PP PPG G G PP PP
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPP--PPPPPGRTPGPPGMPGMPPPPPP 332
Score = 29.1 bits (62), Expect = 4.5
Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +3
Query: 720 PXPGXX-GXGGVLPPXKXPPXPPGEXGXFXFXGPPPXSPP 836
P PG G G+ P PP PP G G PP PP
Sbjct: 312 PPPGRTPGPPGM--PGMPPPPPPSRFGPPGMGGMPPPPPP 349
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.1 bits (62), Expect = 4.5
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = +3
Query: 711 FFFPXPGXXGXGGVLPPXKXPPXPPGEXGXFXFXGPPPXSPP 836
F FP G G GG P PP PPP PP
Sbjct: 18 FLFPMAGGGGGGGGCAPAAPACAPPPPPMCGCAPPPPPPPPP 59
>Z95559-1|CAB08999.1| 289|Caenorhabditis elegans Hypothetical
protein Y41E3.2 protein.
Length = 289
Score = 28.7 bits (61), Expect = 5.9
Identities = 14/45 (31%), Positives = 17/45 (37%)
Frame = +3
Query: 756 PPXKXPPXPPGEXGXFXFXGPPPXSPPXXTXXXPXXXGXGXXVFP 890
P + PP PPG+ G GPP P P G + P
Sbjct: 137 PCPQGPPGPPGQPGIPGDNGPPGEQGPKGPDAAPGEPGPKGPIGP 181
>AF099925-3|AAC69507.1| 394|Caenorhabditis elegans Collagen protein
69 protein.
Length = 394
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +3
Query: 753 LPPXKXPPXPPGEXGXFXFXGPPPXSPPXXTXXXPXXXG 869
LP K PP PG+ G GPP +PP P G
Sbjct: 253 LPGRKGPPGLPGQCGP---PGPPGYTPPPGPPGTPGVQG 288
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 28.7 bits (61), Expect = 5.9
Identities = 16/57 (28%), Positives = 17/57 (29%)
Frame = +3
Query: 720 PXPGXXGXGGVLPPXKXPPXPPGEXGXFXFXGPPPXSPPXXTXXXPXXXGXGXXVFP 890
P G G P PP PP PPP PP P G + P
Sbjct: 546 PIAGLLAANGTNVPIPPPPPPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPPGGLMGP 602
>Z81124-1|CAB03369.1| 312|Caenorhabditis elegans Hypothetical
protein T21B4.2 protein.
Length = 312
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 726 PGXXGXGGVLPPXKXPPXPPGEXGXFXFXGPPPXSPP 836
PG G G P PP P G G + P P PP
Sbjct: 235 PGQQGPPGP-PGPAGPPGPAGNAGQAGYAQPGPAGPP 270
>Z67995-6|CAA91946.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 170 EDNSINTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 340
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>Z67737-7|CAA91543.1| 2692|Caenorhabditis elegans Hypothetical
protein T01H10.8 protein.
Length = 2692
Score = 28.3 bits (60), Expect = 7.8
Identities = 16/57 (28%), Positives = 26/57 (45%)
Frame = +2
Query: 170 EDNSINTLAESAKKTIEELREKVESALAPETVKKNFGTMVDSFNEFYKNLKPAEAPK 340
E++S L K TI + L + K FG ++D FN + NL+ ++ K
Sbjct: 125 EEDSQILLLRLLKTTISS-KSNYHHRLVLDECKVGFGMLIDDFNNGFNNLEKSDVRK 180
>U58736-1|AAB00598.1| 302|Caenorhabditis elegans Dumpy : shorter
than wild-typeprotein 3 protein.
Length = 302
Score = 28.3 bits (60), Expect = 7.8
Identities = 14/32 (43%), Positives = 16/32 (50%)
Frame = +3
Query: 726 PGXXGXGGVLPPXKXPPXPPGEXGXFXFXGPP 821
PG G G P + PP PPG+ G GPP
Sbjct: 224 PGPPGPPGP-PGPQGPPGPPGKDGQPGKAGPP 254
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,182,186
Number of Sequences: 27780
Number of extensions: 326147
Number of successful extensions: 1761
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1623
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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