Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_N12
(971 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 41 2e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 39 0.001
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.015
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.026
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 33 0.061
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.14
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.32
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.75
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 29 1.3
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 28 1.7
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 28 1.7
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 28 2.3
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 27 3.0
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 41.1 bits (92), Expect = 2e-04
Identities = 20/56 (35%), Positives = 24/56 (42%)
Frame = +2
Query: 788 PXPXSXXSRPXSXXPPXGTPPPPXXPXPLPLPXXFPPXXXAXPPPXXPIXPCAPXP 955
P P S RP + PP + PPP P+P PP + PPP P P P
Sbjct: 131 PTPQSEL-RPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPP 185
Score = 35.1 bits (77), Expect = 0.015
Identities = 25/79 (31%), Positives = 25/79 (31%), Gaps = 1/79 (1%)
Frame = +2
Query: 713 PPRXXPTPPSXXPXGXXXAXXHSKXPXPXSXXSRPXSXXPPXGTPPPPXXPXPLP-LPXX 889
PP P PS P A P P P S PP P P P LP
Sbjct: 139 PPTSAPPRPSIPPPSPASAP-----PIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSA 193
Query: 890 FPPXXXAXPPPXXPIXPCA 946
PP PPP P A
Sbjct: 194 VPPMPPKVPPPPLSQAPVA 212
Score = 33.9 bits (74), Expect = 0.035
Identities = 23/84 (27%), Positives = 27/84 (32%), Gaps = 2/84 (2%)
Frame = +3
Query: 699 PRXPRXRXXLXPP-QVXXRGXXXXPXXTPKXXXPFPXXPGPXXXXPPREXXPPXXXPXPS 875
P P + L PP R P P P P PP + P P +
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSA 187
Query: 876 RSXPXSPPXXPP-XPXPXXPYXPV 944
S P + P PP P P PV
Sbjct: 188 PSLPSAVPPMPPKVPPPPLSQAPV 211
Score = 30.3 bits (65), Expect = 0.43
Identities = 27/88 (30%), Positives = 28/88 (31%), Gaps = 2/88 (2%)
Frame = +2
Query: 701 ALXPPPRXXPTPPSXX-PXGXXXAXXHSKXPXPXSXXSRPXSXXP-PXGTPPPPXXPXPL 874
A P PTP S P P P S P P P PPP P+
Sbjct: 122 AAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPV 181
Query: 875 PLPXXFPPXXXAXPPPXXPIXPCAPXPL 958
P P A PP P P P PL
Sbjct: 182 KSPPSAPSLPSAVPP-MPPKVP--PPPL 206
Score = 29.5 bits (63), Expect = 0.75
Identities = 40/161 (24%), Positives = 48/161 (29%), Gaps = 4/161 (2%)
Frame = +2
Query: 461 MGXLXRLSPLNDXAAAXXXPLPPTPXNXL----XRXPIXGXXPNXXAXRPQXNL*XKXAX 628
M L + + AA P PPTP + L P P A P
Sbjct: 109 MPKLRHIGKSSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIP 168
Query: 629 XNRAPEPXPXAALXRXFXXXGXXPALXPPPRXXPTPPSXXPXGXXXAXXHSKXPXPXSXX 808
+ P P A + A+ P P P PP S+ P +
Sbjct: 169 SSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPL------------SQAPV-ANTS 215
Query: 809 SRPXSXXPPXGTPPPPXXPXPLPLPXXFPPXXXAXPPPXXP 931
SRP S PP G P P P P A PP P
Sbjct: 216 SRPSSFAPPAGHAPNVTSESP-KFPNRGPSIPSASVPPVPP 255
Score = 28.3 bits (60), Expect = 1.7
Identities = 26/93 (27%), Positives = 29/93 (31%), Gaps = 4/93 (4%)
Frame = +2
Query: 689 GXXPALXPPPRXXPTPPSXXPXGXXXAXXHSKXPXPXSXXSRPXSXXPPXGTPPPPXXPX 868
G A PP P PP+ P S P P P S P PP
Sbjct: 116 GKSSASAAPPSA-PAPPT--PQSELRPPT-SAPPRPSIPPPSPASAPPIPSKAPPIPSSL 171
Query: 869 PLP----LPXXFPPXXXAXPPPXXPIXPCAPXP 955
P P P PP + P P+ P P P
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 39.1 bits (87), Expect = 0.001
Identities = 29/95 (30%), Positives = 32/95 (33%), Gaps = 9/95 (9%)
Frame = +2
Query: 698 PALXPPPRXXPTPPSXXPXGXXXAXXHSKXPXPXSXX-SRPXSXXP------PXGTPPPP 856
P PP + P+ P G P P S S P S P P G P P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 857 XXPXPLPLPXXFPPXXXAXP--PPXXPIXPCAPXP 955
P P+ P A P PP P P AP P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 38.7 bits (86), Expect = 0.001
Identities = 31/110 (28%), Positives = 35/110 (31%), Gaps = 4/110 (3%)
Frame = +2
Query: 641 PEPXPXAALXRXFXXXGXXPALXPPPRXXPTPPSXXPXGXXXAXXHSKXPXPXSXXSRPX 820
P P AA G PPPR P+ P + P + R
Sbjct: 341 PPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSA 400
Query: 821 SXXPPXG----TPPPPXXPXPLPLPXXFPPXXXAXPPPXXPIXPCAPXPL 958
PP G T PP P P LP PP PP P+ A PL
Sbjct: 401 PALPPLGNASRTSTPP-VPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPL 449
Score = 35.5 bits (78), Expect = 0.011
Identities = 23/86 (26%), Positives = 28/86 (32%)
Frame = +2
Query: 698 PALXPPPRXXPTPPSXXPXGXXXAXXHSKXPXPXSXXSRPXSXXPPXGTPPPPXXPXPLP 877
P + PP P+ P P + P S P + P G P P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 878 LPXXFPPXXXAXPPPXXPIXPCAPXP 955
P PP P P P+ A P
Sbjct: 475 AP---PP--APAPAPAAPVASIAELP 495
Score = 32.3 bits (70), Expect = 0.11
Identities = 22/76 (28%), Positives = 24/76 (31%), Gaps = 8/76 (10%)
Frame = +2
Query: 728 PTPPSXXPXGXXXAXXHSKXPXPXSXXSRPXSXXPPXGT-------PPPPXXPXPLPL-P 883
P PP + K P P SR PP G PPPP P
Sbjct: 291 PLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGS 350
Query: 884 XXFPPXXXAXPPPXXP 931
PP + PPP P
Sbjct: 351 IPLPPQGRSAPPPPPP 366
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/53 (33%), Positives = 20/53 (37%), Gaps = 1/53 (1%)
Frame = +2
Query: 779 SKXPXPXSXXS-RPXSXXPPXGTPPPPXXPXPLPLPXXFPPXXXAXPPPXXPI 934
S P P S S RP P P PP P P PP + P P P+
Sbjct: 228 SAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPP--NSPPRPIAPV 278
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +2
Query: 794 PXSXXSRPXSXXPPXGTPPP--PXXPXPLPLPXXFPPXXXAXPPPXXPIXPCAP 949
P S + P P PP P P P P P PP P P AP
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAP 277
Score = 27.1 bits (57), Expect = 4.0
Identities = 12/34 (35%), Positives = 12/34 (35%)
Frame = +3
Query: 816 PXXXXPPREXXPPXXXPXPSRSXPXSPPXXPPXP 917
P P P P PS SPP PP P
Sbjct: 241 PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP 274
Score = 25.8 bits (54), Expect = 9.2
Identities = 36/128 (28%), Positives = 40/128 (31%), Gaps = 16/128 (12%)
Frame = +2
Query: 623 AXXNRAPEPXPXAALXRXFXXXG------XXPALXPPPR-----XXPTPP----SXXPXG 757
A R P P P + R G P PPPR P PP + P
Sbjct: 306 ANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Query: 758 XXXAXXHSKXPXPXSXXSRPXSXXPPXGTPPPPXXPXPLPLPXXFPPXXXAXPPPXXP-I 934
A + P P S SR S PP P P P P P P P +
Sbjct: 366 PRSAPSTGRQPPPLS-SSRAVS-NPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSL 423
Query: 935 XPCAPXPL 958
P AP L
Sbjct: 424 PPSAPPSL 431
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.015
Identities = 31/113 (27%), Positives = 34/113 (30%), Gaps = 4/113 (3%)
Frame = +2
Query: 641 PEPXPXAALXRXFXXXGXXPALXPPPRXXPTP-PSXXPXGXXXAXXHSKXPXPXSXXSRP 817
P P P A G P P P P PS P + P P S P
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGI--P 1179
Query: 818 XSXXPPXGTP--PPPXXPXPLPLP-XXFPPXXXAXPPPXXPIXPCAPXPLXRP 967
P G P PPP P+P P PP P P P+ P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 33.5 bits (73), Expect = 0.046
Identities = 24/93 (25%), Positives = 31/93 (33%), Gaps = 3/93 (3%)
Frame = +2
Query: 698 PALXPPPRXXPTPPSXXPXGXXXAXXHSKXPXPXSXXSRPXSXXPPXGTPPP---PXXPX 868
P PP P+ P P A ++ P S+ P PP P
Sbjct: 982 PTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAP 1041
Query: 869 PLPLPXXFPPXXXAXPPPXXPIXPCAPXPLXRP 967
P+P+P PP P P AP P+ P
Sbjct: 1042 PVPIPTSTPPV-----PKSSSGAPSAPPPVPAP 1069
Score = 33.5 bits (73), Expect = 0.046
Identities = 21/79 (26%), Positives = 24/79 (30%)
Frame = +3
Query: 732 PPQVXXRGXXXXPXXTPKXXXPFPXXPGPXXXXPPREXXPPXXXPXPSRSXPXSPPXXPP 911
PP V P P P G P PP P + +P PP
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Query: 912 XPXPXXPYXPVPLXPXXGP 968
P P PVP+ P P
Sbjct: 1123 VPKPSVAAPPVPV-PSGAP 1140
Score = 33.1 bits (72), Expect = 0.061
Identities = 20/60 (33%), Positives = 21/60 (35%), Gaps = 2/60 (3%)
Frame = +3
Query: 795 PFPXXPGPXXXXPPREXXPPXXXPXPSRSXPXSPPXX--PPXPXPXXPYXPVPLXPXXGP 968
P P PP PP P PS P PP PP P P PVP+ P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPV--PKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAP 1237
Score = 31.9 bits (69), Expect = 0.14
Identities = 26/91 (28%), Positives = 31/91 (34%), Gaps = 1/91 (1%)
Frame = +2
Query: 698 PALXPPPRXXPTPPSXXPXGXXXAXXHSKXPXPXSXXSRPXSXXPPXGTPPPPXXPXPLP 877
P+ PP P P S P + S P + S S P G PP P P
Sbjct: 1037 PSTAPP---VPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPP---VPAPSG 1090
Query: 878 LPXXFPPXXXAXPPPXXPI-XPCAPXPLXRP 967
+P P A P P + P P P P
Sbjct: 1091 IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAP 1121
Score = 31.9 bits (69), Expect = 0.14
Identities = 19/80 (23%), Positives = 23/80 (28%)
Frame = +3
Query: 708 PRXRXXLXPPQVXXRGXXXXPXXTPKXXXPFPXXPGPXXXXPPREXXPPXXXPXPSRSXP 887
P + + P V P P P P P PP P +
Sbjct: 1093 PVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPV 1152
Query: 888 XSPPXXPPXPXPXXPYXPVP 947
+P PP P P PVP
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVP 1172
Score = 31.1 bits (67), Expect = 0.25
Identities = 19/66 (28%), Positives = 20/66 (30%), Gaps = 3/66 (4%)
Frame = +3
Query: 780 PKXXXPFPXXPGPXXXXP---PREXXPPXXXPXPSRSXPXSPPXXPPXPXPXXPYXPVPL 950
PK P P P P P PP P + P PP P P PVP
Sbjct: 1182 PKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPA 1241
Query: 951 XPXXGP 968
P
Sbjct: 1242 PSSEAP 1247
Score = 29.9 bits (64), Expect = 0.57
Identities = 19/59 (32%), Positives = 21/59 (35%), Gaps = 3/59 (5%)
Frame = +3
Query: 780 PKXXXPFPXXPGPXXXXP-PREXXPPXXXPXPSRSXPXSPPXX--PPXPXPXXPYXPVP 947
PK P P P P P+ P PS + P P PP P P PVP
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVP 1182
Score = 29.5 bits (63), Expect = 0.75
Identities = 38/168 (22%), Positives = 48/168 (28%), Gaps = 11/168 (6%)
Frame = +2
Query: 485 PLNDXAAAXXXPLPPTPXNXLXRXPIXGXXPNXXAXRPQXNL*XKXAXXNRAPEPXPXAA 664
P ND A P P P + P+ + + P+ + A ++ P A
Sbjct: 951 PSNDGRKASG-PRPAAPPSIPPPLPVSNILSSPTSEPPKDH--PPSAPLSKPVSTSPAAP 1007
Query: 665 LXRXFXXXGXXPALXPPPRXXP-TPPSXXPXGXXXAXXHSKXPXPXSXXSRPXSXXPPXG 841
L R P P PP P + P S S PP
Sbjct: 1008 LARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP 1067
Query: 842 TP-------PPPXXPXPLPLPXXFPP---XXXAXPPPXXPIXPCAPXP 955
P P P P+P P PP A PP P P P
Sbjct: 1068 APSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVP 1115
Score = 29.5 bits (63), Expect = 0.75
Identities = 25/89 (28%), Positives = 30/89 (33%), Gaps = 5/89 (5%)
Frame = +2
Query: 716 PRXXPTPPSXXPXGXXXAXXHSKXPXPXSXXSRPXSXXP-PXGTPP---PPXXPXPLPLP 883
P PP P G S P S P P G PP P P+P+P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 884 XXFPP-XXXAXPPPXXPIXPCAPXPLXRP 967
PP + P P AP P+ +P
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAP-PVPKP 1164
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/56 (26%), Positives = 15/56 (26%)
Frame = +3
Query: 780 PKXXXPFPXXPGPXXXXPPREXXPPXXXPXPSRSXPXSPPXXPPXPXPXXPYXPVP 947
P P P P PP P P PP P P PVP
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVP 1115
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/42 (35%), Positives = 17/42 (40%), Gaps = 1/42 (2%)
Frame = +1
Query: 487 PQ*PRCGXXVPXAPHPXQXPX-KAPHTGVPPEXTGXTXPXQP 609
P P+ VP P P + P P GVPP T P P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP 1220
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.3 bits (75), Expect = 0.026
Identities = 17/49 (34%), Positives = 19/49 (38%), Gaps = 1/49 (2%)
Frame = +2
Query: 812 RPXSXXPPX-GTPPPPXXPXPLPLPXXFPPXXXAXPPPXXPIXPCAPXP 955
RP S PP P PP P +P P PP P P P + P
Sbjct: 1693 RPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 31.9 bits (69), Expect = 0.14
Identities = 20/51 (39%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Frame = +2
Query: 809 SRPXSXXPPXGTPPPPXXPXPLPLPXXFPPXXXAXPPPXXPI--XPCAPXP 955
S P PP PPPP P P+P PP + PPP P P P P
Sbjct: 1703 SAPTPPPPPMSVPPPPSAP---PMPAG-PP---SAPPPPLPASSAPSVPNP 1746
Score = 31.1 bits (67), Expect = 0.25
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +3
Query: 801 PXXPGPXXXXPPREXXPPXXXPXPSRSXPXSPPXXPPXPXPXXPYXPVPLXPXXG 965
P P P PP P P S P P P P P P P P G
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPP-SAPPMPAGPPSAPPPPLPASSAPSVPNPG 1747
Score = 29.9 bits (64), Expect = 0.57
Identities = 20/61 (32%), Positives = 23/61 (37%), Gaps = 1/61 (1%)
Frame = +3
Query: 768 PXXTPKXXXPFPXXPGPXXXXPPREXXPPXX-XPXPSRSXPXSPPXXPPXPXPXXPYXPV 944
P P+ P P P PP PP P P+ P +PP PP P P P
Sbjct: 1690 PPVRPQSAAP-PQMSAPTPPPPPMSVPPPPSAPPMPA-GPPSAPP--PPLPASSAPSVPN 1745
Query: 945 P 947
P
Sbjct: 1746 P 1746
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/55 (29%), Positives = 17/55 (30%)
Frame = +2
Query: 713 PPRXXPTPPSXXPXGXXXAXXHSKXPXPXSXXSRPXSXXPPXGTPPPPXXPXPLP 877
P TPP P + P P P PP PP P PLP
Sbjct: 1683 PAHPVSTPP-VRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.9 bits (59), Expect = 2.3
Identities = 15/48 (31%), Positives = 16/48 (33%), Gaps = 3/48 (6%)
Frame = +2
Query: 833 PXGTPP---PPXXPXPLPLPXXFPPXXXAXPPPXXPIXPCAPXPLXRP 967
P TPP P + P PP PPP P P P P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 27.1 bits (57), Expect = 4.0
Identities = 11/38 (28%), Positives = 14/38 (36%)
Frame = +1
Query: 529 HPXQXPXKAPHTGVPPEXTGXTXPXQPXX*XXPAQQGP 642
HP P P + PP+ + T P P P P
Sbjct: 1685 HPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 27.1 bits (57), Expect = 4.0
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 816 PXXXXPPREXXPPXXXPXPSRSXPXSPPXXPPXPXPXXPYXPVPLXPXXGP 968
P PP+ P P P S P PP PP P P PL P
Sbjct: 1694 PQSAAPPQMSAPTP--PPPPMSVPP-PPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 26.6 bits (56), Expect = 5.3
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +2
Query: 698 PALXPPPRXXPTPPSXXPXGXXXAXXHSKXPXPXSXXSRPXSXXP 832
P PPP P PPS P A S P P S P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPP---MPAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.1 bits (72), Expect = 0.061
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 2/54 (3%)
Frame = -2
Query: 955 GXRG--TGXYGXXGXGXGGXXGGEXGXEREGXGXXXGGXXSRGGXXXXGPGXXG 800
G RG G G G GG GG G G G GG RGG G G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.9 bits (69), Expect = 0.14
Identities = 22/65 (33%), Positives = 22/65 (33%), Gaps = 2/65 (3%)
Frame = -2
Query: 955 GXRGTGXYGXXGXGXGGXXGGEXGXE--REGXGXXXGGXXSRGGXXXXGPGXXGXGXXXF 782
G G G G G G GGE G G GG G GPG G G F
Sbjct: 195 GGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGF 254
Query: 781 GVXXG 767
G G
Sbjct: 255 GGGPG 259
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.32
Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 1/47 (2%)
Frame = +2
Query: 830 PPXGTPPPPXXPXPLPLPXXFPPXXXAXPPPXXP-IXPCAPXPLXRP 967
PP P P P+P+P P PPP P + P P P
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +2
Query: 788 PXPXSXXSRPXSXXPPXGTPPPPXXPXPLPLPXXFPPXXXAXPPPXXPIXP 940
P P P P PPP P P P A PPP P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 26.2 bits (55), Expect = 7.0
Identities = 17/52 (32%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = +3
Query: 768 PXXTPKXXXPFPXXPGPXXXXPPREXX--PPXXXPXPSRSXPXSPPXXPPXP 917
P P P P P P PP PP P P + PP PP P
Sbjct: 733 PPPPPAVIVPTPA-PAPIPVPPPAPIMGGPPPPPPPPGVAGA-GPPPPPPPP 782
Score = 25.8 bits (54), Expect = 9.2
Identities = 15/50 (30%), Positives = 15/50 (30%), Gaps = 1/50 (2%)
Frame = +3
Query: 801 PXXPGPXXXXPPREXXP-PXXXPXPSRSXPXSPPXXPPXPXPXXPYXPVP 947
P P P P P P P P P PP P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.75
Identities = 17/58 (29%), Positives = 19/58 (32%)
Frame = +3
Query: 768 PXXTPKXXXPFPXXPGPXXXXPPREXXPPXXXPXPSRSXPXSPPXXPPXPXPXXPYXP 941
P TPK P P P P P + P PSR+ P P P P
Sbjct: 225 PTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQP 282
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 28.7 bits (61), Expect = 1.3
Identities = 20/73 (27%), Positives = 22/73 (30%), Gaps = 1/73 (1%)
Frame = +3
Query: 726 LXPPQVXXRGXXXXPXXTPKXXXPF-PXXPGPXXXXPPREXXPPXXXPXPSRSXPXSPPX 902
L PP V P P P P P P+ P P P + P S P
Sbjct: 153 LRPPPVPQVPSHWYPVSLPSPNLPHQPISKPPVIPNLPKLQVHPNRLPHPIHNHPYSSPT 212
Query: 903 XPPXPXPXXPYXP 941
P P Y P
Sbjct: 213 SYPPPLCPATYCP 225
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 28.3 bits (60), Expect = 1.7
Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = +3
Query: 852 PXXXPXPSRSXPXSP-PXXPPXPXPXXPYXPVPLXP 956
P P P+ P P P PP P P P+P P
Sbjct: 104 PREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEP 139
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 28.3 bits (60), Expect = 1.7
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 3/45 (6%)
Frame = -2
Query: 955 GXRGTGXYGXXGXGXGGXXGGEXGXEREGXGXXXGGX---XSRGG 830
G G G G G GG GG G R G G G SRGG
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGG 177
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 27.9 bits (59), Expect = 2.3
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 851 PPXXPXPLPLPXXFPPXXXAXPPP 922
PP P P P P F P PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPP 28
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +2
Query: 833 PXGTPPPPXXPXPLPLPXXFPPXXXAXPPP 922
P G PPPP P P PP PPP
Sbjct: 5 PPGNPPPPPPP-----PGFEPPSQPPPPPP 29
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 27.5 bits (58), Expect = 3.0
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Frame = +2
Query: 830 PPXGTPPPPXXPXPLPLPXXFP-PXXXAXPPPXXPIXPCAPXPLXRP 967
P PPPP P P P A P+ P AP P P
Sbjct: 361 PQAAFPPPPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPAPAAAP 407
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,770,941
Number of Sequences: 5004
Number of extensions: 20439
Number of successful extensions: 276
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 499296500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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