Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_N05
(859 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_0276 - 28084746-28085003,28085103-28085357,28085531-280857... 51 1e-06
05_07_0059 + 27402365-27402733,27402848-27402982,27403070-274031... 50 3e-06
04_04_0214 - 23674270-23676858,23677574-23680843,23680941-236811... 40 0.002
12_02_1218 - 27088206-27088214,27088577-27088643,27088755-270888... 34 0.13
07_01_0743 + 5678086-5678098,5678436-5678560,5678666-5678800,567... 33 0.39
12_01_0956 + 9528051-9528254,9528752-9528832,9528844-9529047 32 0.51
09_04_0030 + 13940168-13940250,13940703-13941714 31 1.2
09_04_0029 - 13932414-13933416,13933821-13933903 31 1.6
08_01_0669 - 5767689-5767791,5768512-5768630,5769084-5769271,576... 30 2.7
03_02_0143 - 5888005-5888088,5888818-5888949,5889485-5889634,589... 29 3.6
12_02_0996 - 25115643-25115708,25115869-25116107,25116484-251165... 29 4.7
07_03_1483 + 26881032-26882035,26882130-26882204,26882324-268828... 29 4.7
05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571 29 4.7
01_07_0171 + 41683670-41683872,41684386-41684483,41684614-416846... 29 4.7
09_04_0285 + 16390786-16391291,16391370-16391957,16392034-163921... 29 6.3
01_03_0111 - 12638078-12639328,12640886-12641146 29 6.3
10_08_0332 - 16843295-16843356,16843884-16846656 28 8.3
>01_06_0276 - 28084746-28085003,28085103-28085357,28085531-28085798,
28085948-28086253,28086369-28086643,28087034-28087252,
28087486-28089015,28089236-28089397,28089512-28089666,
28090195-28091064,28091363-28091832,28091917-28091981,
28092105-28092448,28092531-28092710,28092817-28092920,
28093053-28093162,28093648-28093744,28094138-28094238,
28094324-28094476,28094561-28094674,28094795-28094884,
28094960-28095307
Length = 2157
Score = 51.2 bits (117), Expect = 1e-06
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 5/154 (3%)
Frame = +1
Query: 388 EAARCLKCADAPCQKS-----CPTQIDVKSFITSIANKNYYGAAKAILSDNPLGLTCGMV 552
++ARC+ C C + CP + F + + A +L N G V
Sbjct: 1690 QSARCMDCGTPFCHQESSGAGCPLGNKIPEFNELVHQNRWREALDRLLETNNFPEFTGRV 1749
Query: 553 CPTSDLCVGGCNLHATEEGAINIGGLQHFAVDIFMKMGXPQTLXPNTKPLPKGGDHKIAL 732
CP C G C L E ++I ++ +D + G + P PL + G K+A+
Sbjct: 1750 CPAP--CEGSCVLGIIEN-PVSIKSIECAIIDKGFEEGW---MVPRP-PLQRTGK-KVAI 1801
Query: 733 IGGGPXSISCACFLAXLGYKDITVYEKEKYLGGL 834
IG GP ++ A L +G+ +TV+E+ +GGL
Sbjct: 1802 IGSGPAGLAAADQLNKMGH-FVTVFERADRIGGL 1834
>05_07_0059 + 27402365-27402733,27402848-27402982,27403070-27403183,
27403297-27403449,27403544-27403644,27403945-27404041,
27404542-27404651,27404775-27404878,27405129-27405308,
27405398-27405741,27405841-27405905,27405981-27406450,
27406939-27407793,27408045-27408116,27408475-27408575,
27409069-27409170,27409295-27409456,27409665-27411230,
27411384-27411602,27413924-27414198,27414291-27414596,
27414727-27415012,27415085-27415087,27415162-27415416,
27415537-27415803
Length = 2236
Score = 49.6 bits (113), Expect = 3e-06
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 5/154 (3%)
Frame = +1
Query: 388 EAARCLKCADAPCQKS-----CPTQIDVKSFITSIANKNYYGAAKAILSDNPLGLTCGMV 552
++ARC+ C C + CP + F + ++ A +L N G V
Sbjct: 1759 QSARCMDCGTPFCHQEGSGAGCPLGNKIPEFNELVHQNRWHEALDRLLETNNFPEFTGRV 1818
Query: 553 CPTSDLCVGGCNLHATEEGAINIGGLQHFAVDIFMKMGXPQTLXPNTKPLPKGGDHKIAL 732
CP C G C L + ++I ++ +D + G + P PL + G ++A+
Sbjct: 1819 CPAP--CEGSCVL-GIIDNPVSIKSIECAIIDKGFEEGW---MVPR-PPLRRTG-KRVAI 1870
Query: 733 IGGGPXSISCACFLAXLGYKDITVYEKEKYLGGL 834
+G GP ++ A L +G+ +TV+E+ +GGL
Sbjct: 1871 VGSGPAGLAAADQLNKMGH-FVTVFERADRIGGL 1903
>04_04_0214 -
23674270-23676858,23677574-23680843,23680941-23681119,
23681200-23681559,23681645-23682086,23682199-23682332,
23682479-23682680
Length = 2391
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/40 (40%), Positives = 27/40 (67%)
Frame = +1
Query: 715 DHKIALIGGGPXSISCACFLAXLGYKDITVYEKEKYLGGL 834
D +I ++G GP +S A LA LGY+++T++EK + G+
Sbjct: 21 DTRIGIVGAGPSGLSAAYALAKLGYRNVTLFEKCHTVSGM 60
>12_02_1218 -
27088206-27088214,27088577-27088643,27088755-27088821,
27088934-27089054,27089272-27089351,27089574-27089686,
27090305-27090420,27090507-27090575,27090684-27090758,
27090836-27090880,27091100-27091187,27091488-27091570,
27091655-27091705,27091848-27091905,27092019-27092201,
27092385-27092546,27092713-27093029
Length = 567
Score = 34.3 bits (75), Expect = 0.13
Identities = 17/49 (34%), Positives = 26/49 (53%)
Frame = +1
Query: 685 PNTKPLPKGGDHKIALIGGGPXSISCACFLAXLGYKDITVYEKEKYLGG 831
P + LPKG +IGGG ++ A +LA G + + V E+ +GG
Sbjct: 29 PQQQLLPKGKRWDAVVIGGGHNGLAAAAYLARAG-RSVAVLERRGVIGG 76
>07_01_0743 +
5678086-5678098,5678436-5678560,5678666-5678800,
5679128-5679200,5679581-5679654,5680292-5680396,
5680637-5680881,5680965-5681052,5681202-5681244,
5681319-5681475,5681648-5681776,5682012-5682084,
5682281-5682445,5682530-5682544,5682651-5682780,
5684517-5684651,5684880-5684945,5685088-5685170,
5685503-5685549,5685736-5685814,5685914-5686006
Length = 690
Score = 32.7 bits (71), Expect = 0.39
Identities = 18/59 (30%), Positives = 30/59 (50%)
Frame = +1
Query: 655 MKMGXPQTLXPNTKPLPKGGDHKIALIGGGPXSISCACFLAXLGYKDITVYEKEKYLGG 831
M + P+ L P +G K+A+IG G +S A L G+ ++ +YE ++GG
Sbjct: 1 MAVNAPKGLFPPEPEHYRGPKLKVAIIGAGLAGMSTAVELLDQGH-EVDLYESRPFIGG 58
>12_01_0956 + 9528051-9528254,9528752-9528832,9528844-9529047
Length = 162
Score = 32.3 bits (70), Expect = 0.51
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 2/39 (5%)
Frame = +1
Query: 721 KIALIGGGPXSISCACFLAX--LGYKDITVYEKEKYLGG 831
++A++G G ++ A LA G D+TVYEKE LGG
Sbjct: 2 RVAVVGAGVSGLAAAHELATSCAGGVDVTVYEKEDSLGG 40
>09_04_0030 + 13940168-13940250,13940703-13941714
Length = 364
Score = 31.1 bits (67), Expect = 1.2
Identities = 22/76 (28%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +1
Query: 475 IANKNYYGAAKAILS-DNPLGLTCGMVCPTSDLCVGGCNLHATEEGAINIGGLQHFAVDI 651
+ N++Y A L D+ L C V S + + G N G + +GGL H AV
Sbjct: 141 VVNEHYVLRVPAGLPLDSAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKF 200
Query: 652 FMKMGXPQTLXPNTKP 699
G T+ +T P
Sbjct: 201 AKAFGMRVTVI-STSP 215
>09_04_0029 - 13932414-13933416,13933821-13933903
Length = 361
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 1/76 (1%)
Frame = +1
Query: 475 IANKNYYGAAKAILS-DNPLGLTCGMVCPTSDLCVGGCNLHATEEGAINIGGLQHFAVDI 651
+ N++Y A L D L C V S + + G N G + +GGL H AV
Sbjct: 138 VVNEHYVLRVPAGLPLDGAAPLLCAGVTVYSPMVIHGLNAPGKHVGVVGLGGLGHVAVKF 197
Query: 652 FMKMGXPQTLXPNTKP 699
G T+ +T P
Sbjct: 198 AKAFGMRVTVI-STSP 212
>08_01_0669 -
5767689-5767791,5768512-5768630,5769084-5769271,
5769624-5769718,5769936-5770093
Length = 220
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 3/41 (7%)
Frame = +3
Query: 432 VVSHADRCQKLHH*HRQ*ELLWSSEGHFIRQ---SPRFDLR 545
VVS +RC LH H Q +WS HF+ SP F L+
Sbjct: 76 VVSTGERCSDLHF-HPQQRFIWSDSIHFVVNWLVSPSFTLQ 115
>03_02_0143 -
5888005-5888088,5888818-5888949,5889485-5889634,
5890540-5890710,5890840-5891007,5891139-5891234,
5891777-5891839,5891949-5892114,5892207-5892274,
5892646-5892789,5893111-5893176,5893329-5893520,
5894567-5894657,5895241-5895329,5895521-5895583,
5895698-5895823,5895902-5895991,5896059-5896181,
5896503-5896619,5896704-5896904,5897643-5897723,
5897897-5897977,5898083-5898184,5898264-5898488,
5898571-5898726,5898798-5899010,5899306-5899455,
5900082-5900204,5900299-5900364,5900555-5900620,
5900686-5900817,5900891-5900965,5901355-5901438,
5901516-5901668,5901741-5901806,5902044-5902205,
5902272-5902388,5902495-5902566,5902702-5902761,
5902869-5902985,5904131-5904430,5904518-5904622,
5905710-5905775,5905853-5906297,5906399-5906567,
5906684-5906736,5906819-5906925
Length = 1981
Score = 29.5 bits (63), Expect = 3.6
Identities = 13/49 (26%), Positives = 26/49 (53%)
Frame = +1
Query: 145 FKSISNIMAKLLSKELPDIENLLKLNPTVKPYTNLVPSAQTKKIKQHWK 291
+KS++ + +++ EN+L PT TN+ A ++KQH++
Sbjct: 432 YKSLNRVQSRIFQATYYTNENILVCAPTGAGKTNIAMIAVLHEVKQHFR 480
>12_02_0996 -
25115643-25115708,25115869-25116107,25116484-25116577,
25116726-25116864,25116960-25117081,25117261-25117491,
25117583-25117644,25118335-25118461,25118890-25119183,
25119266-25119622
Length = 576
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/43 (32%), Positives = 21/43 (48%)
Frame = +1
Query: 703 PKGGDHKIALIGGGPXSISCACFLAXLGYKDITVYEKEKYLGG 831
P D +A++GGG ++CA LA G + + LGG
Sbjct: 84 PVPPDPSVAVVGGGASGLACAASLAARGVRAVVFDTGMHGLGG 126
>07_03_1483 +
26881032-26882035,26882130-26882204,26882324-26882861,
26883999-26884895,26885178-26885327,26885459-26885791,
26886501-26886695,26887805-26887918
Length = 1101
Score = 29.1 bits (62), Expect = 4.7
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = -3
Query: 770 KQAQLILXGPPPIKAILWSPPFGSGFVLGXKVWGMP 663
K + +L G P K W PP+ G V G +VW +P
Sbjct: 301 KAIKKLLVGHP--KRDPWPPPWSGGVVRGGEVWHIP 334
>05_01_0436 + 3466397-3466654,3467336-3467410,3468321-3469571
Length = 527
Score = 29.1 bits (62), Expect = 4.7
Identities = 17/41 (41%), Positives = 20/41 (48%)
Frame = +1
Query: 709 GGDHKIALIGGGPXSISCACFLAXLGYKDITVYEKEKYLGG 831
G + + +IGGGP A A LG K T EK LGG
Sbjct: 36 GEESDVVVIGGGPGGYVAAIKAAQLGLK-TTCIEKRGTLGG 75
>01_07_0171 +
41683670-41683872,41684386-41684483,41684614-41684692,
41684845-41685000,41685021-41685146,41686249-41686540,
41686978-41687053,41687295-41687392,41687523-41687665,
41688522-41688579,41689055-41689213,41689291-41689343,
41689978-41690212,41690317-41690403,41690607-41690711
Length = 655
Score = 29.1 bits (62), Expect = 4.7
Identities = 20/66 (30%), Positives = 30/66 (45%), Gaps = 2/66 (3%)
Frame = +1
Query: 196 DIENLLKLNPTVKPYTNLVPSAQTKKIKQHWKR--NADRKCTTCPTLNKNFDDIKHTTLS 369
D++ TV+ Y NL S T+ H+ N + C T K DD+K T+S
Sbjct: 525 DVQRTPGYAETVRTYGNLTHSI-TEYYSTHFSTGANTSQVCLTYDEFTKKCDDLKKITVS 583
Query: 370 ERGALR 387
+ AL+
Sbjct: 584 DVFALQ 589
>09_04_0285 +
16390786-16391291,16391370-16391957,16392034-16392160,
16392291-16392477,16392585-16392741,16392847-16393201
Length = 639
Score = 28.7 bits (61), Expect = 6.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = -3
Query: 308 FLSAFLFQCCLIFLVW 261
F+ AF F CC++FL++
Sbjct: 437 FIKAFFFYCCIVFLIY 452
>01_03_0111 - 12638078-12639328,12640886-12641146
Length = 503
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +1
Query: 709 GGDHKIALIGGGPXSISCACFLAXLGYKDITVYEKEKYLGG 831
G + + ++GGGP A A LG K T EK LGG
Sbjct: 37 GEESDVVVVGGGPGGYVAAIKAAQLGLK-TTCIEKRGTLGG 76
>10_08_0332 - 16843295-16843356,16843884-16846656
Length = 944
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +1
Query: 133 KTDFFKSISNIMAKLLSKELPDIENLLKLNPTVKPYTNLVPSAQTKKIKQ 282
K +F SN ++ + EL ++ENL++L+ + T +PS+ K+KQ
Sbjct: 413 KLEFLYLFSNNLSGSIPVELGELENLVELDLSENSLTGPIPSS-LGKLKQ 461
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,348,521
Number of Sequences: 37544
Number of extensions: 547856
Number of successful extensions: 1356
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1354
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2397465936
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -