Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_M17
(914 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.50
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.50
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.50
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 32 0.66
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 32 0.66
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 31 1.1
AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily a... 31 1.5
AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily a... 31 1.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 30 2.0
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 30 2.7
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 30 2.7
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 30 2.7
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 30 2.7
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 30 2.7
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 30 2.7
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 30 2.7
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.7
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin fami... 29 3.5
Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 29 4.6
AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein. 29 4.6
AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical ... 29 4.6
AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical ... 29 4.6
AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor o... 29 4.6
AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi dom... 29 4.6
U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical pr... 29 6.1
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 29 6.1
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 29 6.1
Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z78411-2|CAB01646.1| 285|Caenorhabditis elegans Hypothetical pr... 28 8.1
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 8.1
U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body prot... 28 8.1
U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body prot... 28 8.1
U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body prot... 28 8.1
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 28 8.1
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 28 8.1
J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein ( C.ele... 28 8.1
AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical... 28 8.1
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 8.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 8.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 8.1
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 8.1
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +1
Query: 787 LTGKTFPPXXP--LWXKXGXXXPXPPPXXVXPPPXXXPPP 900
+TG PP P L G P PPP PPP PPP
Sbjct: 738 ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 805 PPXXPLWXKXGXXXPXPPPXXVXPPPXXXPPPPXXG 912
PP L G P PPP + P PPPP G
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +1
Query: 787 LTGKTFPPXXP--LWXKXGXXXPXPPPXXVXPPPXXXPPPP 903
+TG PP P L G P PPP + P PPPP
Sbjct: 722 ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 805 PPXXPLWXKXGXXXPXPPPXXVXPPPXXXPPPP 903
PP P P PPP PP PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 834 GXLXPQXPPXGXXPPPGVXPPPPXXXG 914
G P PP G PPP PPP G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKG 782
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +1
Query: 787 LTGKTFPPXXP--LWXKXGXXXPXPPPXXVXPPPXXXPPP 900
+TG PP P L G P PPP PPP PPP
Sbjct: 738 ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 777
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 805 PPXXPLWXKXGXXXPXPPPXXVXPPPXXXPPPPXXG 912
PP L G P PPP + P PPPP G
Sbjct: 714 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 749
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +1
Query: 787 LTGKTFPPXXP--LWXKXGXXXPXPPPXXVXPPPXXXPPPP 903
+TG PP P L G P PPP + P PPPP
Sbjct: 722 ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 762
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 805 PPXXPLWXKXGXXXPXPPPXXVXPPPXXXPPPP 903
PP P P PPP PP PPPP
Sbjct: 713 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 745
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 834 GXLXPQXPPXGXXPPPGVXPPPPXXXG 914
G P PP G PPP PPP G
Sbjct: 756 GGPPPPPPPPGGCPPPPPPPPPGGFKG 782
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 32.3 bits (70), Expect = 0.50
Identities = 17/40 (42%), Positives = 18/40 (45%), Gaps = 2/40 (5%)
Frame = +1
Query: 787 LTGKTFPPXXP--LWXKXGXXXPXPPPXXVXPPPXXXPPP 900
+TG PP P L G P PPP PPP PPP
Sbjct: 321 ITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPPPPPPP 360
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = +1
Query: 805 PPXXPLWXKXGXXXPXPPPXXVXPPPXXXPPPPXXG 912
PP L G P PPP + P PPPP G
Sbjct: 297 PPPPGLPPITGGPPPPPPPGGLPPITGGPPPPPPPG 332
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/41 (39%), Positives = 18/41 (43%), Gaps = 2/41 (4%)
Frame = +1
Query: 787 LTGKTFPPXXP--LWXKXGXXXPXPPPXXVXPPPXXXPPPP 903
+TG PP P L G P PPP + P PPPP
Sbjct: 305 ITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPPP 345
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 805 PPXXPLWXKXGXXXPXPPPXXVXPPPXXXPPPP 903
PP P P PPP PP PPPP
Sbjct: 296 PPPPPGLPPITGGPPPPPPPGGLPPITGGPPPP 328
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 834 GXLXPQXPPXGXXPPPGVXPPPPXXXG 914
G P PP G PPP PPP G
Sbjct: 339 GGPPPPPPPPGGCPPPPPPPPPGGFKG 365
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 31.9 bits (69), Expect = 0.66
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 847 PXPPPXXVXPPPXXXPPPP 903
P PPP PPP PPPP
Sbjct: 134 PPPPPPHYPPPPPHYPPPP 152
Score = 31.5 bits (68), Expect = 0.87
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 847 PXPPPXXVXPPPXXXPPPP 903
P PPP PPP PPPP
Sbjct: 135 PPPPPHYPPPPPHYPPPPP 153
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 31.9 bits (69), Expect = 0.66
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 847 PXPPPXXVXPPPXXXPPPP 903
P PPP PPP PPPP
Sbjct: 31 PPPPPPMCAPPPLPCPPPP 49
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/36 (38%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Frame = +1
Query: 805 PPXXPLWXKXGXXXPXPP---PXXVXPPPXXXPPPP 903
PP P+ P PP P PPP PPPP
Sbjct: 32 PPPPPMCAPPPLPCPPPPICPPQFCPPPPMCPPPPP 67
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +3
Query: 846 PQXPPXGXXPPPGVXPPPP 902
P PP PPP + PPPP
Sbjct: 60 PMCPPPPPPPPPPMCPPPP 78
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 853 PPPXXVXPPPXXXPPPP 903
PPP PPP PPPP
Sbjct: 63 PPPPPPPPPPMCPPPPP 79
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 31.1 bits (67), Expect = 1.1
Identities = 17/40 (42%), Positives = 18/40 (45%)
Frame = -1
Query: 911 PXXGGGGXXXGGGXTXXGGGLGXXXPXFXQRGXXGGKVXP 792
P GGGG GGG GGG G P G GG+ P
Sbjct: 188 PGGGGGGMGGGGGSGGSGGGSGRFPPPPPPYG-GGGRRRP 226
>AF098500-3|ABD94103.1| 774|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform b protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +1
Query: 805 PPXXPLWXKXGXXXPXPPPXX--VXPPPXXXPPPP 903
PP PL P PPP + PPP PPP
Sbjct: 77 PPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPP 111
>AF098500-2|AAC67399.2| 996|Caenorhabditis elegans Temporarily
assigned gene nameprotein 343, isoform a protein.
Length = 996
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +1
Query: 805 PPXXPLWXKXGXXXPXPPPXX--VXPPPXXXPPPP 903
PP PL P PPP + PPP PPP
Sbjct: 299 PPPLPLSNPPAKPTPPPPPPKPTIRPPPIPASPPP 333
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 2/35 (5%)
Frame = +1
Query: 805 PPXXPLWXKX--GXXXPXPPPXXVXPPPXXXPPPP 903
PP P K G P PPP + P PPPP
Sbjct: 1359 PPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPP 1393
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 819 PLGKXGXLXPQXPPXGXXPPPGVXPPPPXXXG 914
P G+ + P+ P G PPPG+ PPP G
Sbjct: 774 PGGRQAPMPPRGGP-GAPPPPGMRPPPGAPGG 804
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +1
Query: 442 PXPXPPXXNPXP-PXFXXGKXXSXPXRGEXGXPXKPGXXP 558
P P P P P P G+ P RG G P PG P
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 819 PLGKXGXLXPQXPPXGXXPPPGVXPPPPXXXG 914
P G+ + P+ P G PPPG+ PPP G
Sbjct: 774 PGGRQAPMPPRGGP-GAPPPPGMRPPPGAPGG 804
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +1
Query: 442 PXPXPPXXNPXP-PXFXXGKXXSXPXRGEXGXPXKPGXXP 558
P P P P P P G+ P RG G P PG P
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/59 (28%), Positives = 21/59 (35%)
Frame = +3
Query: 405 PPPPGKRXLXFGAXSXSPPXKPXAPGXXGGEXXFPXPKGGXRFXXKTGXXPRKXFXTKG 581
PPPPG+ G PP P G G P P G R+ P + + G
Sbjct: 301 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 359
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 805 PPXXPLWXKXGXXXPXPPPXXVXPPPXXXPPPP 903
PP P G P PPP P PPPP
Sbjct: 335 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 367
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/59 (28%), Positives = 21/59 (35%)
Frame = +3
Query: 405 PPPPGKRXLXFGAXSXSPPXKPXAPGXXGGEXXFPXPKGGXRFXXKTGXXPRKXFXTKG 581
PPPPG+ G PP P G G P P G R+ P + + G
Sbjct: 311 PPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGGMPPPPPPRYPSAG 369
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +1
Query: 805 PPXXPLWXKXGXXXPXPPPXXVXPPPXXXPPPP 903
PP P G P PPP P PPPP
Sbjct: 345 PPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPP 377
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 29.9 bits (64), Expect = 2.7
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +1
Query: 847 PXPPPXXVXPPPXXXPPPPXXG 912
P PP PPP PPPP G
Sbjct: 42 PPPPMCGCAPPPPPPPPPPMCG 63
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 819 PLGKXGXLXPQXPPXGXXPPPGVXPPPPXXXG 914
P G+ + P+ P G PPPG+ PPP G
Sbjct: 774 PGGRQAPMPPRGGP-GAPPPPGMRPPPGAPGG 804
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +1
Query: 442 PXPXPPXXNPXP-PXFXXGKXXSXPXRGEXGXPXKPGXXP 558
P P P P P P G+ P RG G P PG P
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 29.9 bits (64), Expect = 2.7
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +3
Query: 819 PLGKXGXLXPQXPPXGXXPPPGVXPPPPXXXG 914
P G+ + P+ P G PPPG+ PPP G
Sbjct: 774 PGGRQAPMPPRGGP-GAPPPPGMRPPPGAPGG 804
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +1
Query: 442 PXPXPPXXNPXP-PXFXXGKXXSXPXRGEXGXPXKPGXXP 558
P P P P P P G+ P RG G P PG P
Sbjct: 758 PHPSGPSPVPRPAPAPPGGRQAPMPPRGGPGAPPPPGMRP 797
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 29.9 bits (64), Expect = 2.7
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 853 PPPXXVXPPPXXXPPPP 903
PPP PPP PPPP
Sbjct: 134 PPPTPAAPPPPPPPPPP 150
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.7
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = +3
Query: 390 PXXKXPPPPGKRXLXFGAXSXSPPXKPXAPGXXGGEXXFPXPKGG 524
P PPPP + L S +PP P P GG P P GG
Sbjct: 559 PIPPPPPPPLPQNL-----SGAPPPPPPPPPMLGGPPPPPPPPGG 598
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 805 PPXXPLWXKXGXXXPXPPPXXVXPPPXXXPPP 900
PP P P PPP + PP PPP
Sbjct: 565 PPPLPQNLSGAPPPPPPPPPMLGGPPPPPPPP 596
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/35 (40%), Positives = 16/35 (45%)
Frame = -3
Query: 903 GGGGXXXRGGXNXXXGGXGXXGPXFXPKGXXGGKG 799
GGG RGG GG G G + G GG+G
Sbjct: 33 GGGYSGGRGGGYGGGGGGGYGGGGYGGGGRGGGRG 67
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -1
Query: 902 GGGGXXXGGGXTXXGGGLGXXXPXFXQRGXXGGKVXP 792
GGGG GGG GGG G G GG P
Sbjct: 75 GGGGCGGGGGCGGGGGGCGGGGGGCGGGGGCGGGCAP 111
>AF067611-2|AAW88406.1| 2302|Caenorhabditis elegans Cadherin family
protein 10 protein.
Length = 2302
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/19 (52%), Positives = 11/19 (57%)
Frame = +1
Query: 847 PXPPPXXVXPPPXXXPPPP 903
P PPP + PP PPPP
Sbjct: 2278 PPPPPGYMHTPPLPPPPPP 2296
>Z77655-1|CAB01137.1| 393|Caenorhabditis elegans Hypothetical
protein C56A3.1 protein.
Length = 393
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = -1
Query: 902 GGGGXXXGGGXTXXGGGLGXXXPXFXQRGXXGGKVXPV 789
GGGG GGG GGG G + G G PV
Sbjct: 111 GGGGGCGGGGGGGCGGGGGGGGGGYASGGSGGFASAPV 148
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -1
Query: 902 GGGGXXXGGGXTXXGGGLGXXXPXFXQRGXXGG 804
GGGG GGG GGG G G GG
Sbjct: 91 GGGGCGGGGGGCGGGGGCGGGGGGGCGGGGGGG 123
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 29.1 bits (62), Expect = 4.6
Identities = 14/40 (35%), Positives = 16/40 (40%), Gaps = 4/40 (10%)
Frame = +3
Query: 807 PXXSPLGKXGXLXPQXPPXGXXPPP----GVXPPPPXXXG 914
P + K P P G PPP G+ PPPP G
Sbjct: 53 PPGQSIPKPSFFIPPPVPNGFIPPPPGPGGIPPPPPMFAG 92
>AF308860-1|AAG45416.1| 1475|Caenorhabditis elegans SOP-3 protein.
Length = 1475
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 817 PLWXKXGXXXPXPPPXXVXPPPXXXPPPPXXG 912
PL K P PPP PP P PP G
Sbjct: 1274 PLLKKKPPLQPPPPPQMTGPPIGIYPGPPAPG 1305
>AF106574-2|AAM81088.1| 315|Caenorhabditis elegans Hypothetical
protein E02D9.1b protein.
Length = 315
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -3
Query: 900 GGGXXXRGGXNXXXGGX-GXXGPXFXPKGXXGGKGFXG 790
GGG RGG GG G G P G GG+G G
Sbjct: 261 GGGRGGRGGRGGFRGGFRGGRGGFGGPGGPMGGRGGMG 298
>AF106574-1|AAY44015.1| 317|Caenorhabditis elegans Hypothetical
protein E02D9.1c protein.
Length = 317
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 1/38 (2%)
Frame = -3
Query: 900 GGGXXXRGGXNXXXGGX-GXXGPXFXPKGXXGGKGFXG 790
GGG RGG GG G G P G GG+G G
Sbjct: 261 GGGRGGRGGRGGFRGGFRGGRGGFGGPGGPMGGRGGMG 298
>AC024201-13|AAF36027.2| 1475|Caenorhabditis elegans Suppressor of
pal-1 protein 3,isoform a protein.
Length = 1475
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +1
Query: 817 PLWXKXGXXXPXPPPXXVXPPPXXXPPPPXXG 912
PL K P PPP PP P PP G
Sbjct: 1274 PLLKKKPPLQPPPPPQMTGPPIGIYPGPPAPG 1305
>AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi
domain-containing protein2 protein.
Length = 975
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/22 (54%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Frame = +3
Query: 846 PQXPPXGXXP---PPGVXPPPP 902
P PP G P PPG+ PPPP
Sbjct: 12 PPVPPVGFPPVTAPPGLHPPPP 33
>U58755-7|AAB00696.1| 136|Caenorhabditis elegans Hypothetical
protein C34D4.11 protein.
Length = 136
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/38 (42%), Positives = 17/38 (44%)
Frame = -3
Query: 903 GGGGXXXRGGXNXXXGGXGXXGPXFXPKGXXGGKGFXG 790
GGGG RGG GG G G G GG+G G
Sbjct: 97 GGGGGGGRGGGGGGRGGGGGGGGGRG--GGGGGRGGGG 132
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/33 (36%), Positives = 13/33 (39%)
Frame = +1
Query: 805 PPXXPLWXKXGXXXPXPPPXXVXPPPXXXPPPP 903
PP + G PP PPP PPPP
Sbjct: 117 PPPPVQYQNQGPQYIEAPPPPPSPPPPPPPPPP 149
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 846 PQXPPXGXXPPPGVXPPPP 902
P PP PPPGV PPPP
Sbjct: 713 PGYPPA--PPPPGVGPPPP 729
>Z78413-7|CAB01657.1| 352|Caenorhabditis elegans Hypothetical
protein T01C3.7 protein.
Length = 352
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)
Frame = -3
Query: 903 GGGGXXXRGGXNXXXGGX--GXXGPXFXPKGXXGGKG 799
GG G RGG GG G G P+G GG+G
Sbjct: 56 GGRGGGDRGGFRGGRGGGDRGGFGGRGSPRGGFGGRG 92
>Z78411-2|CAB01646.1| 285|Caenorhabditis elegans Hypothetical
protein F02D8.2 protein.
Length = 285
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = +1
Query: 853 PPPXXVXPPPXXXPPPP 903
PPP V PPP PPP
Sbjct: 125 PPPVYVTPPPVYITPPP 141
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 805 PPXXPLWXKXGXXXPXPPPXXVXPPPXXXPPP 900
P PL + P PPP + PPP PPP
Sbjct: 776 PSAIPLPPRLQGGIPPPPPLGIIPPP---PPP 804
>U40802-3|AAM81105.1| 369|Caenorhabditis elegans Dense body protein
1, isoform b protein.
Length = 369
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 847 PXPPPXXVXPPPXXXPPPP 903
P PPP PP PPPP
Sbjct: 148 PRPPPPVELSPPPRPPPPP 166
>U40802-2|AAM81104.1| 1010|Caenorhabditis elegans Dense body protein
1, isoform a protein.
Length = 1010
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 847 PXPPPXXVXPPPXXXPPPP 903
P PPP PP PPPP
Sbjct: 789 PRPPPPVELSPPPRPPPPP 807
>U40802-1|AAM81106.1| 999|Caenorhabditis elegans Dense body protein
1, isoform c protein.
Length = 999
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 847 PXPPPXXVXPPPXXXPPPP 903
P PPP PP PPPP
Sbjct: 789 PRPPPPVELSPPPRPPPPP 807
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 847 PXPPPXXVXPPPXXXPPPP 903
P PPP PPP PPP
Sbjct: 6 PPPPPPPPPPPPAASAPPP 24
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 847 PXPPPXXVXPPPXXXPPPP 903
P PPP PPP PPP
Sbjct: 6 PPPPPPPPPPPPAASAPPP 24
>J04804-1|AAA28002.1| 1010|Caenorhabditis elegans protein (
C.elegans vinculin (deb-1) gene, complete cds. ).
Length = 1010
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 847 PXPPPXXVXPPPXXXPPPP 903
P PPP PP PPPP
Sbjct: 789 PRPPPPVELSPPPRPPPPP 807
>AL117204-23|CAB55137.1| 285|Caenorhabditis elegans Hypothetical
protein Y116A8C.35 protein.
Length = 285
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -2
Query: 901 GGGGXTPGGGXXPXGGXWG 845
GGGG GGG GG WG
Sbjct: 216 GGGGGGGGGGGYGSGGGWG 234
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Frame = +3
Query: 846 PQXPPXGXXPPP--GVXPPPP 902
P PP G PPP G PPPP
Sbjct: 272 PPPPPTGSPPPPPAGGSPPPP 292
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Frame = +3
Query: 846 PQXPPXGXXPPP--GVXPPPP 902
P PP G PPP G PPPP
Sbjct: 293 PPPPPTGSPPPPPAGGSPPPP 313
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 8.1
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 2/21 (9%)
Frame = +3
Query: 846 PQXPPXGXXPPP--GVXPPPP 902
P PP G PPP G PPPP
Sbjct: 278 PPPPPTGSPPPPPAGGSPPPP 298
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 28.3 bits (60), Expect = 8.1
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +1
Query: 805 PPXXPLWXKXGXXXPXPPPXXVXPPPXXXPPP 900
P PL + P PPP + PPP PPP
Sbjct: 776 PSAIPLPPRLQGGIPPPPPLGIIPPP---PPP 804
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.149 0.520
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,704,667
Number of Sequences: 27780
Number of extensions: 188883
Number of successful extensions: 3216
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 669
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2072
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2339274014
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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