Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_M09
(981 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 42 2e-04
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 38 0.003
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 35 0.020
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.11
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.11
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.33
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.33
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 30 0.43
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 28 2.3
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 27 4.0
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 5.3
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 5.3
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 41.5 bits (93), Expect = 2e-04
Identities = 25/84 (29%), Positives = 26/84 (30%)
Frame = +1
Query: 682 PXXNXXXXPAXPPXXGXXTPXPGGXXRXXXXXPXGGPPPPXXQXXKXPPXPPPXPXXXGP 861
P + P P P P P G PP PP PPP P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPS-VAAPPVPAPSSGIPPVPKPAAGVPPVPPP---SEAP 1198
Query: 862 PXPXXSKXXPXXPXPXXXPPXPPP 933
P P S P P P PP P P
Sbjct: 1199 PVPKPSVGVPPVPPPSTAPPVPTP 1222
Score = 41.1 bits (92), Expect = 2e-04
Identities = 36/161 (22%), Positives = 41/161 (25%)
Frame = +1
Query: 451 PPXGXGGGGXPPPXKXPPPXRGXXGPLXXLGAPXPXSPXQKXXRGXPXXRXXXXXXXXXX 630
PP G P PPP + + AP P P +
Sbjct: 1050 PPVPKSSSGAP---SAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPK 1106
Query: 631 XXXXXAXXXPPXXXGGXPXXNXXXXPAXPPXXGXXTPXPGGXXRXXXXXPXGGPPPPXXQ 810
P P + P P P P P G PP P
Sbjct: 1107 PSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPS-VAAPPVPAPSGAPPVPKPS 1165
Query: 811 XXKXPPXPPPXPXXXGPPXPXXSKXXPXXPXPXXXPPXPPP 933
PP P P PP P + P P P PP P P
Sbjct: 1166 VAA-PPVPAPSSGI--PPVPKPAAGVPPVPPPSEAPPVPKP 1203
Score = 35.9 bits (79), Expect = 0.009
Identities = 23/77 (29%), Positives = 23/77 (29%), Gaps = 1/77 (1%)
Frame = +1
Query: 706 PAXPPXXGXXTPXPGGXXRXXXXXPXGGPPPPXXQXXKXPPXPPPXPXXXGPPXPXXSKX 885
P P P P P PP PP PPP PP P S
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP---STAPPVPTPSAG 1225
Query: 886 XPXXPXP-XXXPPXPPP 933
P P P PP P P
Sbjct: 1226 LPPVPVPTAKAPPVPAP 1242
Score = 33.1 bits (72), Expect = 0.061
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +3
Query: 825 PXPPPXAXXXXXPPPXXXQKXPRXAPPXXXPPXPPPPXXXRXPXPXXXXVP 977
P P P A PPP P+ P PP PPP P P P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPK--PSVGVPPVPPPSTAPPVPTPSAGLPP 1228
Score = 32.7 bits (71), Expect = 0.081
Identities = 16/52 (30%), Positives = 16/52 (30%)
Frame = +1
Query: 778 PXGGPPPPXXQXXKXPPXPPPXPXXXGPPXPXXSKXXPXXPXPXXXPPXPPP 933
P PP P P PP P S P P P PP P P
Sbjct: 1037 PSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAP 1088
Score = 31.9 bits (69), Expect = 0.14
Identities = 22/77 (28%), Positives = 22/77 (28%), Gaps = 1/77 (1%)
Frame = +1
Query: 706 PAXPPXXGXXTPXPGGXXRXXXXXPXGGPPPPXXQXXKXPPXPP-PXPXXXGPPXPXXSK 882
P P P P P PP P PP P P P P S
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS- 1080
Query: 883 XXPXXPXPXXXPPXPPP 933
P P P PP P P
Sbjct: 1081 GAPPVPAPSGIPPVPKP 1097
Score = 31.5 bits (68), Expect = 0.19
Identities = 25/84 (29%), Positives = 25/84 (29%), Gaps = 8/84 (9%)
Frame = +1
Query: 706 PAXPPXXGXXTPXPGGXXRXXXXXPXGGPP--PPXXQXXKXPPXP----PPXPXXXG--P 861
PA PP P P PP P P P PP P P
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAP 1022
Query: 862 PXPXXSKXXPXXPXPXXXPPXPPP 933
P P S P P P PP P P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIP 1046
Score = 29.9 bits (64), Expect = 0.57
Identities = 26/109 (23%), Positives = 28/109 (25%), Gaps = 8/109 (7%)
Frame = +1
Query: 658 PPXXXGGXPXXNXXXXPAXPPXXGXXTPXP-GGXXRXXXXXPXGGPPPPXXQXXKXPPXP 834
PP P N P P P P PP K PP P
Sbjct: 966 PPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVP 1025
Query: 835 ------PPXPXXX-GPPXPXXSKXXPXXPXPXXXPPXPPPXXXXARRXP 960
PP P PP P + P P PPP + P
Sbjct: 1026 LPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIP 1074
Score = 29.5 bits (63), Expect = 0.76
Identities = 21/74 (28%), Positives = 21/74 (28%)
Frame = +1
Query: 706 PAXPPXXGXXTPXPGGXXRXXXXXPXGGPPPPXXQXXKXPPXPPPXPXXXGPPXPXXSKX 885
P PP P P P PP P PP P P PP P S
Sbjct: 1190 PVPPPSEAPPVPKPSVGV-PPVPPPSTAPPVPTPSAG-LPPVP--VPTAKAPPVPAPSSE 1245
Query: 886 XPXXPXPXXXPPXP 927
P P P P
Sbjct: 1246 APSVSTPRSSVPSP 1259
Score = 28.3 bits (60), Expect = 1.7
Identities = 17/51 (33%), Positives = 17/51 (33%), Gaps = 1/51 (1%)
Frame = +3
Query: 831 PPPXAXXXXXPP-PXXXQKXPRXAPPXXXPPXPPPPXXXRXPXPXXXXVPP 980
PP A PP P P PP PP P P P P PP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGV-PPVPPPSTAPP 1218
Score = 27.5 bits (58), Expect = 3.1
Identities = 30/146 (20%), Positives = 32/146 (21%)
Frame = +1
Query: 454 PXGXGGGGXPPPXKXPPPXRGXXGPLXXLGAPXPXSPXQKXXRGXPXXRXXXXXXXXXXX 633
P G P P PP G + P +P G P
Sbjct: 1115 PAPSGAPPVPKPSVAAPPVPVPSGA-PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPA 1173
Query: 634 XXXXAXXXPPXXXGGXPXXNXXXXPAXPPXXGXXTPXPGGXXRXXXXXPXGGPPPPXXQX 813
P G P P P P P P G PP
Sbjct: 1174 PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPT 1233
Query: 814 XKXPPXPPPXPXXXGPPXPXXSKXXP 891
K PP P P P S P
Sbjct: 1234 AKAPPVPAPSSEAPSVSTPRSSVPSP 1259
Score = 26.6 bits (56), Expect = 5.3
Identities = 17/58 (29%), Positives = 18/58 (31%), Gaps = 6/58 (10%)
Frame = +3
Query: 825 PXPPPXAXXXXXPPPXXXQKXPRX---APPXXXPPXPPP---PXXXRXPXPXXXXVPP 980
P P P P P P+ APP P PP P P P PP
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPP 1160
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/55 (27%), Positives = 17/55 (30%), Gaps = 2/55 (3%)
Frame = +3
Query: 819 TXPXPPPXAXXXXXPPPXXX--QKXPRXAPPXXXPPXPPPPXXXRXPXPXXXXVP 977
T P P + PPP + P P PP P P P P P
Sbjct: 1049 TPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 37.5 bits (83), Expect = 0.003
Identities = 37/162 (22%), Positives = 39/162 (24%), Gaps = 2/162 (1%)
Frame = +1
Query: 451 PPXGXGGGGXPPPXKXPPPXRGXXG--PLXXLGAPXPXSPXQKXXRGXPXXRXXXXXXXX 624
PP G G P PPP G PL G P P +
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRA 384
Query: 625 XXXXXXXAXXXPPXXXGGXPXXNXXXXPAXPPXXGXXTPXPGGXXRXXXXXPXGGPPPPX 804
P P + PP TP P P PP
Sbjct: 385 VSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVP---TP-PSLPPSAPPSLPPSAPPSLP 440
Query: 805 XQXXKXPPXPPPXPXXXGPPXPXXSKXXPXXPXPXXXPPXPP 930
PP PP P PP P P P PP P
Sbjct: 441 MGAPAAPPLPPSAPI--APPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 31.1 bits (67), Expect = 0.25
Identities = 23/82 (28%), Positives = 24/82 (29%), Gaps = 6/82 (7%)
Frame = +1
Query: 706 PAXPPXXGXXTPXPGGXXRXXXXXPXGGPPPPXXQXXKXPPXPPPXPXXXGPPXPXXSKX 885
P PP P G P PPPP P PP PP P +
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPP-PPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 886 XPXXPXP------XXXPPXPPP 933
P P PP PPP
Sbjct: 372 TGRQPPPLSSSRAVSNPPAPPP 393
Score = 27.5 bits (58), Expect = 3.1
Identities = 36/162 (22%), Positives = 38/162 (23%), Gaps = 1/162 (0%)
Frame = -2
Query: 788 PPXGXXXXXRXXPP-GSGVXXPXLGGXAGXXXXFXXGXPPXXSGGXXXAXPPPXGGGXXA 612
PP R PP G+G L G P G PPP
Sbjct: 313 PPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPST 372
Query: 611 GPPPRXXGXPRXXFCXGEXGXGAPXXXXGPXXPRXGGGXFXGGGXPPPPXPXGGXXXESP 432
G P R P P P G PP P P P
Sbjct: 373 GRQPPPLSSSRAVSNPPAPPPAIPGRS-APALPPLGNASRTS--TPPVPTPPSLPPSAPP 429
Query: 431 VXXXXXXXXXPXGXPXSPXPPXFXQKXPFXPPPXGWGXPXPP 306
P G P +P P P P P PP
Sbjct: 430 SLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 27.1 bits (57), Expect = 4.0
Identities = 18/76 (23%), Positives = 19/76 (25%)
Frame = +1
Query: 706 PAXPPXXGXXTPXPGGXXRXXXXXPXGGPPPPXXQXXKXPPXPPPXPXXXGPPXPXXSKX 885
P PP G + P R P PP PPP K
Sbjct: 255 PIPPPSNGTVSSPPNSPPRPIAPVSMN----PAINSTSKPPLPPPSSRVSAAALAANKKR 310
Query: 886 XPXXPXPXXXPPXPPP 933
P P P PP
Sbjct: 311 PPPPPPPSRRNRGKPP 326
Score = 27.1 bits (57), Expect = 4.0
Identities = 18/60 (30%), Positives = 19/60 (31%)
Frame = -1
Query: 486 RGXPXPPPPXGXEXKXKPGGXXXXXXXPPFXXPXKPXAXPIXPKXPXXPPPXRLGXXPPP 307
R P PPP K G PP P + A P PP R PPP
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIP----LPPQGRSAPPPPP 365
Score = 27.1 bits (57), Expect = 4.0
Identities = 31/171 (18%), Positives = 33/171 (19%)
Frame = +2
Query: 428 PPGFXFXSXPXGGGGXGXPRXKXPPPPXXGXXGXXXXWGPXXPXPPXKXXPGAXPXXXXX 607
PP P G G PPPP P P P + P
Sbjct: 316 PPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQ 375
Query: 608 XXXXXXXXXXXXXPGXPPQXXXGAPRXXTPXGXXXXPPXXAXXPPXRGXXXGXXXXPXKG 787
P PP + P G P P
Sbjct: 376 PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSA 435
Query: 788 APPPPXXNXXNXXXXXXXXXXXXXXXXXGXPKXXPXRPXXXXPPXXPPPXP 940
PP G P P P PP P P P
Sbjct: 436 --PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +1
Query: 817 KXPPXPPPXPXXXGPPXPXXSKXXPXXPXPXXXPPXPPPXXXXARRXP 960
+ PP PPP G P P PP PPP A P
Sbjct: 310 RPPPPPPPSRRNRGKPPIGNGSSNSSLP-----PPPPPPRSNAAGSIP 352
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.7 bits (76), Expect = 0.020
Identities = 19/51 (37%), Positives = 19/51 (37%), Gaps = 3/51 (5%)
Frame = +1
Query: 790 PPPPXXQXXKXPPXPPPXPXXXGPPXPXXSKXXPXXPXP---XXXPPXPPP 933
PPPP P P P P PP P P P P PP PPP
Sbjct: 732 PPPPPPAVIV--PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
Score = 33.5 bits (73), Expect = 0.046
Identities = 17/52 (32%), Positives = 17/52 (32%)
Frame = +3
Query: 825 PXPPPXAXXXXXPPPXXXQKXPRXAPPXXXPPXPPPPXXXRXPXPXXXXVPP 980
P PPP A P P P PP PPPP P PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 32.7 bits (71), Expect = 0.081
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = +1
Query: 706 PAXPPXXGXXTPXPGGXXRXXXXXPXGGPPPPXXQXXKXPPXPPPXPXXXGPPXP 870
P PP TP P P PPP PP PPP GPP P
Sbjct: 733 PPPPPAVIVPTPAPA---------PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 30.7 bits (66), Expect = 0.33
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 817 KXPPXPPPXPXXXGPPXPXXSKXXPXXPXPXXXPPXPPP 933
K PP PPP P P P P PP PPP
Sbjct: 730 KSPPPPPP-AVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 451 PPXGXGGGGXPPPXKXPP 504
PP G G G PPP PP
Sbjct: 766 PPPGVAGAGPPPPPPPPP 783
Score = 27.1 bits (57), Expect = 4.0
Identities = 15/59 (25%), Positives = 16/59 (27%)
Frame = +2
Query: 788 APPPPXXNXXNXXXXXXXXXXXXXXXXXGXPKXXPXRPXXXXPPXXPPPXPPPXAXXXG 964
+PPPP G P P P PPP PPP G
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGG 789
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = -1
Query: 402 PFXXPXKPXAXPIXPKXPXXPPPXRLGXXPPP 307
P P P A + P PPP G PPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.3 bits (70), Expect = 0.11
Identities = 21/50 (42%), Positives = 21/50 (42%), Gaps = 2/50 (4%)
Frame = -2
Query: 929 GGXGGXXXGXGXXGXFLXXXGX--GGPXXXGXGGGXGGCXXXXXXGGGGP 786
GG GG G G F G GGP G GGG GG GGGP
Sbjct: 211 GGFGGEGHHHGGHGGFGGGPGGFEGGPG--GFGGGPGGFGGGLGGFGGGP 258
Score = 31.9 bits (69), Expect = 0.14
Identities = 30/92 (32%), Positives = 30/92 (32%)
Frame = -2
Query: 932 GGGXGGXXXGXGXXGXFLXXXGXGGPXXXGXGGGXGGCXXXXXXGGGGPPXGXXXXXRXX 753
GGG GG G G G GG G GG G G GG P G
Sbjct: 187 GGGFGGFGGGSGGP-----PPGPGGFGGFGGFGGEGH-HHGGHGGFGGGPGGFEGGPGGF 240
Query: 752 PPGSGVXXPXLGGXAGXXXXFXXGXPPXXSGG 657
G G LGG G F G P GG
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGG--PGGHGG 270
Score = 28.7 bits (61), Expect = 1.3
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = -3
Query: 511 GGGGGXFXAGXXXPPPXPG 455
GGG G F G PPP PG
Sbjct: 187 GGGFGGFGGGSGGPPPGPG 205
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +2
Query: 338 GGKXGXFGXXGXAXGXXGXXKGGXXXXXXXPPGFXFXSXPXGGGGXG 478
GG+ G G G G +GG P GF GGG G
Sbjct: 214 GGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGG 260
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = -2
Query: 506 GGGXFXGGGXPPPPXPXG 453
G G F GG PPP P G
Sbjct: 189 GFGGFGGGSGGPPPGPGG 206
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 32.3 bits (70), Expect = 0.11
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 2/54 (3%)
Frame = +1
Query: 778 PXGGPPPPXXQXXKXPPXPPPXPXXXGPPXPXXSKXXP--XXPXPXXXPPXPPP 933
P P PP Q PP P PP P + P P P PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 30.7 bits (66), Expect = 0.33
Identities = 23/79 (29%), Positives = 23/79 (29%), Gaps = 3/79 (3%)
Frame = +1
Query: 706 PAXPPXXGXXTPXPGGXXRXXXXXPXGGPPPPXXQXXKXPPXPPPXPXXXGPPXPXXSKX 885
PA P P R P PP K PP P P P P S
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPS--KAPPIPSSLPPPAQPAAPVKSPP 185
Query: 886 X-PXXPX--PXXXPPXPPP 933
P P P P PPP
Sbjct: 186 SAPSLPSAVPPMPPKVPPP 204
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.33
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = +1
Query: 793 PPPXXQXXKXPPXPPPXPXXX--GPPXPXXSKXXPXXPXP 906
PPP PP PP P PP P + P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 29.1 bits (62), Expect = 1.0
Identities = 14/48 (29%), Positives = 16/48 (33%)
Frame = -1
Query: 477 PXPPPPXGXEXKXKPGGXXXXXXXPPFXXPXKPXAXPIXPKXPXXPPP 334
P PP + P PP P P A P+ P PPP
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 29.1 bits (62), Expect = 1.0
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 1/35 (2%)
Frame = +3
Query: 834 PPXAXXXXXPPPXXXQKXPRXAPPXXX-PPXPPPP 935
PP PPP P APP PP PPP
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/51 (27%), Positives = 14/51 (27%)
Frame = +1
Query: 778 PXGGPPPPXXQXXKXPPXPPPXPXXXGPPXPXXSKXXPXXPXPXXXPPXPP 930
P PP PP P PP P P P P P P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 27.9 bits (59), Expect = 2.3
Identities = 17/56 (30%), Positives = 17/56 (30%)
Frame = +1
Query: 793 PPPXXQXXKXPPXPPPXPXXXGPPXPXXSKXXPXXPXPXXXPPXPPPXXXXARRXP 960
PP Q P P P PP P P P PP PP A P
Sbjct: 1690 PPVRPQSAAPPQMSAPTP----PPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 27.5 bits (58), Expect = 3.1
Identities = 11/27 (40%), Positives = 12/27 (44%)
Frame = +3
Query: 897 APPXXXPPXPPPPXXXRXPXPXXXXVP 977
APP P PPPP P P +P
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/38 (34%), Positives = 13/38 (34%)
Frame = +1
Query: 451 PPXGXGGGGXPPPXKXPPPXRGXXGPLXXLGAPXPXSP 564
PP PPP PPP P AP P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 30.7 bits (66), Expect = 0.33
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +1
Query: 778 PXGGPPPPXXQXXKXPPXPPPXPXXXG 858
P G PPPP PP PP P G
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 28.3 bits (60), Expect = 1.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 890 PXRPXXXXPPXXPPPXPPP 946
P P PP PPP PPP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +3
Query: 903 PXXXPPXPPPPXXXRXPXPXXXXVPP 980
P PP PPPP P PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 25.8 bits (54), Expect = 9.3
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 872 GXPKXXPXRPXXXXPPXXPPPXPP 943
G P P P P PPP PP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 30.3 bits (65), Expect = 0.43
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 932 GGGXGGXXXGXGXXGXFLXXXGXGGPXXXGXGGGXGG 822
GGG G G G G F G GG G GG G
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSG 482
Score = 26.6 bits (56), Expect = 5.3
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +2
Query: 308 GGGXXPNLXGGGKXGXFGXXGXAXGXXGXXKGG 406
GGG G G G FG G G G +GG
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGG 478
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.9 bits (59), Expect = 2.3
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 2/42 (4%)
Frame = -3
Query: 979 GGTXXXXGXGXRXXXGGGGXGGXXXG--GAXRGXFWXXXGGG 860
GG+ G R GGG GG G G RG F GG
Sbjct: 148 GGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 27.1 bits (57), Expect = 4.0
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = -2
Query: 929 GGXGGXXXGXGXXGXFLXXXGXGGPXXXGXGGGXGGCXXXXXXGGG 792
GG GG G G G G GG GGG GG GG
Sbjct: 9 GGRGGSRGGRG--GFNGGRGGFGGGRGGARGGGRGGARGGRGGRGG 52
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = -2
Query: 932 GGGXGGXXXGXGXXGXFLXXXGXGGPXXXGXGGGXGG 822
GGG GG G G G G G G GG GG
Sbjct: 37 GGGRGGARGGRGGRGG---ARGGRGGSSGGRGGAKGG 70
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.6 bits (56), Expect = 5.3
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = +3
Query: 888 PRXAPPXXXPPXPPPP 935
P+ A P PP PPPP
Sbjct: 229 PKQADPLPAPPPPPPP 244
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.6 bits (56), Expect = 5.3
Identities = 19/85 (22%), Positives = 22/85 (25%)
Frame = +1
Query: 706 PAXPPXXGXXTPXPGGXXRXXXXXPXGGPPPPXXQXXKXPPXPPPXPXXXGPPXPXXSKX 885
P P G + P R PPP P P P G +
Sbjct: 882 PVRSPFPGASSAQPAAMSRTSSVSTLPPPPPTASMTASAPAIASPPPPKVGETYHPPTAS 941
Query: 886 XPXXPXPXXXPPXPPPXXXXARRXP 960
P P P P P A + P
Sbjct: 942 GTRVP-PVQQPSHPNPYTPVAPQSP 965
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,184,536
Number of Sequences: 5004
Number of extensions: 37554
Number of successful extensions: 445
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 255
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 505288058
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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