Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_M06
(1506 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0154 + 14509979-14512033 31 1.8
07_01_0080 + 587674-588510 31 1.8
01_03_0270 + 14445240-14445464,14445490-14445655,14446193-144463... 31 2.4
07_03_1136 + 24218601-24218734,24218769-24219906 30 4.1
05_07_0332 - 29332520-29332818,29333511-29333725,29334380-293344... 30 4.1
03_01_0515 - 3864796-3865425 30 4.1
08_02_1143 + 24659105-24659386,24660171-24660272,24661259-246615... 30 5.5
08_01_0059 - 394001-394708 30 5.5
05_01_0351 + 2750253-2751042,2751951-2751958,2752122-2752149,275... 30 5.5
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 30 5.5
03_05_0576 + 25765137-25766420 30 5.5
02_05_1057 + 33809982-33810366,33810436-33810687,33810727-338109... 29 7.2
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 29 9.6
09_06_0107 + 20907560-20908491,20908511-20908625,20908967-209090... 29 9.6
02_05_0686 - 30900748-30902167,30903442-30904742 29 9.6
01_06_0027 - 25742122-25742310,25742481-25742553,25743219-25744159 29 9.6
01_01_0796 + 6190931-6192745 29 9.6
>07_03_0154 + 14509979-14512033
Length = 684
Score = 31.5 bits (68), Expect = 1.8
Identities = 14/24 (58%), Positives = 14/24 (58%)
Frame = +1
Query: 4 PLPXPRXAXAXPXPXPXPXPPXPP 75
PLP P A A P P P P PP PP
Sbjct: 45 PLPLP--AAAPPPPPPPPPPPPPP 66
>07_01_0080 + 587674-588510
Length = 278
Score = 31.5 bits (68), Expect = 1.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 3 PPSPPPXRGGXXTPPTXPXPPRSXXXP 83
PP PPP G PP P PP P
Sbjct: 93 PPPPPPPSSGSPPPPPPPPPPPPPPPP 119
Score = 31.5 bits (68), Expect = 1.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 3 PPSPPPXRGGXXTPPTXPXPPRSXXXP 83
PP PPP G PP P PP P
Sbjct: 94 PPPPPPSSGSPPPPPPPPPPPPPPPPP 120
>01_03_0270 +
14445240-14445464,14445490-14445655,14446193-14446341,
14446634-14446674,14447683-14447755
Length = 217
Score = 31.1 bits (67), Expect = 2.4
Identities = 13/22 (59%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +3
Query: 3 PPSPPPXRGGXXTPPT-XPXPP 65
PPSPPP GG PP+ P PP
Sbjct: 12 PPSPPPSCGGIPPPPSRRPRPP 33
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 30.3 bits (65), Expect = 4.1
Identities = 15/28 (53%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -3
Query: 82 GXXXXRGGXGXVGGVXXP-PRXGGGEGG 2
G RGG G GGV P P GGG GG
Sbjct: 330 GTVDLRGGGGGAGGVFPPTPDLGGGGGG 357
>05_07_0332 - 29332520-29332818,29333511-29333725,29334380-29334408,
29334956-29335045,29335120-29335155,29335222-29336553,
29337331-29337497,29337519-29337724,29337815-29338036,
29338332-29338381,29338754-29338870,29339471-29339551,
29339656-29339694,29340464-29340636,29340769-29340826,
29340934-29340987,29341066-29341613,29341695-29341755,
29342180-29342260,29342448-29342630,29342908-29343162,
29343304-29343423,29343497-29344901,29344988-29345085,
29345164-29345218,29345307-29345366,29346498-29346697
Length = 2077
Score = 30.3 bits (65), Expect = 4.1
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 3 PPSPPPXRGGXXTPPTXPXPP 65
PP PPP G PP P PP
Sbjct: 1934 PPPPPPVEGKPKPPPHAPPPP 1954
>03_01_0515 - 3864796-3865425
Length = 209
Score = 30.3 bits (65), Expect = 4.1
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 1 LPLPXPRXAXAXPXPXPXPXPPXP 72
LP P P A + P P P P PP P
Sbjct: 88 LPPPPPPPAASPPPPPPSPPPPSP 111
Score = 29.9 bits (64), Expect = 5.5
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +1
Query: 4 PLPXPRXAXAXPXPXPXPXPPXPP 75
P P P + P P P P PP PP
Sbjct: 72 PPPPPPSVTSSPPPPPLPPPPPPP 95
>08_02_1143 +
24659105-24659386,24660171-24660272,24661259-24661521,
24661775-24661874,24662080-24662238,24662327-24663147,
24663299-24663618,24665831-24667398
Length = 1204
Score = 29.9 bits (64), Expect = 5.5
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +3
Query: 3 PPSPPPXRGGXXTPPTXPXPPRSXXXP 83
PPSPP R PP P PPR P
Sbjct: 709 PPSPPHLRIPRPWPPPPPPPPRRRAEP 735
>08_01_0059 - 394001-394708
Length = 235
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 6 PSPPPXRGGXXTPPTXPXPPRSXXXP 83
P PPP R P T P PPR P
Sbjct: 2 PPPPPPRRAPPPPATPPPPPRRAPPP 27
>05_01_0351 +
2750253-2751042,2751951-2751958,2752122-2752149,
2754692-2754775,2755780-2757548
Length = 892
Score = 29.9 bits (64), Expect = 5.5
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 16 PRXAXAXPXPXPXPXPPXPP 75
PR A P P P P PP PP
Sbjct: 754 PRHTDALPLPLPLPPPPPPP 773
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 29.9 bits (64), Expect = 5.5
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +3
Query: 3 PPSPPPXRGGXXTPPTXPXPPRSXXXP 83
PP PP GG PPT P P P
Sbjct: 1185 PPPPPRGHGGVGGPPTPPGAPAPPMPP 1211
Score = 29.1 bits (62), Expect = 9.6
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 4/31 (12%)
Frame = +3
Query: 3 PPSPPPXR----GGXXTPPTXPXPPRSXXXP 83
PP PPP GG TPP P PP P
Sbjct: 1184 PPPPPPRGHGGVGGPPTPPGAPAPPMPPGVP 1214
>03_05_0576 + 25765137-25766420
Length = 427
Score = 29.9 bits (64), Expect = 5.5
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = +3
Query: 3 PPSPPPXRGGXXTPPTXPXP 62
PPSPPP +PPT P P
Sbjct: 90 PPSPPPAAAVSVSPPTQPRP 109
>02_05_1057 +
33809982-33810366,33810436-33810687,33810727-33810926,
33811021-33811122
Length = 312
Score = 29.5 bits (63), Expect = 7.2
Identities = 13/21 (61%), Positives = 13/21 (61%)
Frame = -3
Query: 64 GGXGXVGGVXXPPRXGGGEGG 2
GG G VGGV P GGG GG
Sbjct: 32 GGGGGVGGVFIPGIIGGGGGG 52
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 29.1 bits (62), Expect = 9.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 3 PPSPPPXRGGXXTPPTXPXPP 65
PP PPP R TP P PP
Sbjct: 333 PPPPPPSRFNNTTPKPPPPPP 353
>09_06_0107 +
20907560-20908491,20908511-20908625,20908967-20909058,
20909293-20909556,20910714-20911494
Length = 727
Score = 29.1 bits (62), Expect = 9.6
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 10 PXPRXAXAXPXPXPXPXPPXPP 75
P P+ + P P P P PP PP
Sbjct: 74 PPPQTPPSPPPPPPPPPPPPPP 95
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 29.1 bits (62), Expect = 9.6
Identities = 13/26 (50%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Frame = +1
Query: 4 PLPXPRXAXAXPXPXPXPX--PPXPP 75
P P P+ A A P P P P PP PP
Sbjct: 315 PPPPPKPAAAAPPPPPPPKAAPPPPP 340
>01_06_0027 -
25742122-25742310,25742481-25742553,25743219-25744159
Length = 400
Score = 29.1 bits (62), Expect = 9.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +1
Query: 4 PLPXPRXAXAXPXPXPXPXPPXP 72
P P P A P P P P PP P
Sbjct: 26 PQPEPETPQASPSPPPAPDPPTP 48
>01_01_0796 + 6190931-6192745
Length = 604
Score = 29.1 bits (62), Expect = 9.6
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 3 PPSPPPXRGGXXTPPTXPXPP 65
PP PPP GG P P PP
Sbjct: 238 PPPPPPAAGGSLWIPELPPPP 258
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,416,460
Number of Sequences: 37544
Number of extensions: 138002
Number of successful extensions: 4168
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3250
length of database: 14,793,348
effective HSP length: 85
effective length of database: 11,602,108
effective search space used: 4826476928
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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