Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_M03
(874 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 35 0.013
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 35 0.017
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 31 0.28
SPBC21D10.06c |map4||cell agglutination protein Map4|Schizosacch... 29 0.86
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 28 1.5
SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr 1||... 28 2.0
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 2.0
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 27 4.6
SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase Wis4|Schizo... 27 4.6
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 26 8.1
SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase Pl... 26 8.1
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.1 bits (77), Expect = 0.013
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = +2
Query: 725 PPVVPXXATGIPXPKXPPXXVXPPKXGGSXTAPPXXXXXPXKXPXPPP 868
PP +P A P P P + PP G APP P P P P
Sbjct: 436 PPSLPMGAPAAP-PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 26.6 bits (56), Expect = 4.6
Identities = 16/52 (30%), Positives = 18/52 (34%), Gaps = 5/52 (9%)
Frame = +2
Query: 725 PPVVPXXATGIPXPKXPPXX-----VXPPKXGGSXTAPPXXXXXPXKXPXPP 865
PP +P A P PP PP + APP P P PP
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 34.7 bits (76), Expect = 0.017
Identities = 24/106 (22%), Positives = 40/106 (37%)
Frame = +2
Query: 170 PTQETATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSLVLAVG 349
PT ET T + T + +TTT+ + T + T T P + T+ LP++ +
Sbjct: 102 PTVETTTTPMVETTTITPMVETTTITPMVEAMITLMEETMTTPMEETTTILPMAAMTTPM 161
Query: 350 SKEYLTKXKIXGXKXKSTXAADLPLVEG*LXPDMIRYIDEFGQTTT 487
+ T + + P+VE M +TTT
Sbjct: 162 EETTTTTPMVETTTIPTVETMTTPMVEAMTILPMAAMTTPMEETTT 207
Score = 27.1 bits (57), Expect = 3.5
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 167 TPTQETATNLLTTARTSLILPK---TTTLMETATNLSTTVHITWTVPKADLTSSLPL 328
TP +ET T + T+ ILP TT ++ET T TV T T P + T+ P+
Sbjct: 68 TPMEETTT-ITPMVETTTILPMAAMTTPMVETTT--IPTVETT-TTPMVETTTITPM 120
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 30.7 bits (66), Expect = 0.28
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 2/49 (4%)
Frame = +2
Query: 728 PVVPXXATGIPXPKXPPXXVXPPKX--GGSXTAPPXXXXXPXKXPXPPP 868
P P A +P P P V PP GG PP P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPP 780
>SPBC21D10.06c |map4||cell agglutination protein
Map4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 948
Score = 29.1 bits (62), Expect = 0.86
Identities = 16/50 (32%), Positives = 29/50 (58%)
Frame = +2
Query: 185 ATNLLTTARTSLILPKTTTLMETATNLSTTVHITWTVPKADLTSSLPLSL 334
A+ L +++ T+ + P +T ET ++ S+ T T+ + TSS P+SL
Sbjct: 234 ASTLESSSLTNTVSPTESTFYETKSSTSSVP--TQTIDSSSFTSSTPVSL 281
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 4/39 (10%)
Frame = +1
Query: 232 DYNPNG-NGYEPIDNGAYYVDRPQG---RPYFKPTPFPG 336
DYN N N Y PI N Y+++ G PYF PG
Sbjct: 119 DYNNNRKNFYPPIQNSTYFINATGGIDSMPYFGLNNAPG 157
>SPAC4F10.16c |||P-type ATPase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1367
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -2
Query: 354 LLPTASTRERGRLEVRSALGTVHVICTVVDRFV 256
++P STR+R + +R G +H+IC D +
Sbjct: 762 IIPFTSTRKRMSVIIRDEDGIIHLICKGADTVI 794
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 27.9 bits (59), Expect = 2.0
Identities = 16/47 (34%), Positives = 17/47 (36%)
Frame = +2
Query: 728 PVVPXXATGIPXPKXPPXXVXPPKXGGSXTAPPXXXXXPXKXPXPPP 868
P VP + P PK P PP S PP P PPP
Sbjct: 1150 PPVPAPSGAPPVPK--PSVAAPPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 27.9 bits (59), Expect = 2.0
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +2
Query: 728 PVVPXXATGIPXPKXPPXXVXPPKXGGSXTAPPXXXXXPXKXPXPPP 868
P VP ++GIP P P PP S APP P PPP
Sbjct: 1169 PPVPAPSSGIP-PVPKPAAGVPPVPPPS-EAPPVPKPSVGVPPVPPP 1213
Score = 27.5 bits (58), Expect = 2.6
Identities = 15/47 (31%), Positives = 17/47 (36%)
Frame = +2
Query: 728 PVVPXXATGIPXPKXPPXXVXPPKXGGSXTAPPXXXXXPXKXPXPPP 868
P VP + G+P PP PP S PP P P P
Sbjct: 1198 PPVPKPSVGVPP--VPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 25.8 bits (54), Expect = 8.1
Identities = 20/56 (35%), Positives = 21/56 (37%), Gaps = 6/56 (10%)
Frame = +2
Query: 725 PPV-VPXXATGIPXPKX--PPXXVX---PPKXGGSXTAPPXXXXXPXKXPXPPPXA 874
PPV VP A +P P PP PP S APP P P P A
Sbjct: 1131 PPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAA 1186
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 26.6 bits (56), Expect = 4.6
Identities = 16/50 (32%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Frame = +2
Query: 725 PPVVPXXATGIPXPKXP-PXXVXPP-KXGGSXTAPPXXXXXPXKXPXPPP 868
PP P A IP P P + PP + +PP P P PP
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPP 199
>SPAC9G1.02 |wis4|wak1, wik1|MAP kinase kinase kinase
Wis4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1401
Score = 26.6 bits (56), Expect = 4.6
Identities = 10/36 (27%), Positives = 17/36 (47%)
Frame = +3
Query: 258 RTYRQRCILRGPSPRPTLLQAYPFPWCSRWEVKNIL 365
R + ++C R P RP + PW + + K I+
Sbjct: 1280 RDFIEQCFERDPEQRPRAVDLLTHPWITDFRKKTII 1315
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 25.8 bits (54), Expect = 8.1
Identities = 20/63 (31%), Positives = 21/63 (33%), Gaps = 9/63 (14%)
Frame = +2
Query: 707 AH*XXCPPVVPXXAT----GIPXPKXPPXXVXPPKXG-----GSXTAPPXXXXXPXKXPX 859
AH PPV P A P P PP V PP G +APP
Sbjct: 1684 AHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSV 1743
Query: 860 PPP 868
P P
Sbjct: 1744 PNP 1746
>SPBC776.14 |plh1||phospholipid-diacylglycerol acyltransferase
Plh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 623
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +1
Query: 229 KDYNPNGNGYEPIDNGAYYVDRPQGRP 309
K Y +G G +P + G YY + P+G+P
Sbjct: 479 KIYCVHGVG-KPTERGYYYTNNPEGQP 504
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,819,938
Number of Sequences: 5004
Number of extensions: 51751
Number of successful extensions: 164
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 125
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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