Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_M01
(912 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 25 2.1
10_03_0023 - 7151465-7152111,7152222-7152405 30 2.9
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 24 3.4
01_05_0490 + 22672241-22674679 24 4.4
12_02_0299 - 17051570-17052474,17053542-17053755 29 5.1
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 29 5.1
01_01_0892 + 7037384-7037795,7038447-7038962,7039507-7039593,703... 24 5.8
12_02_1174 - 26696869-26698191 29 6.8
09_04_0032 - 13953323-13955269 29 6.8
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 23 7.3
10_06_0039 - 9966744-9967535,9968241-9968482,9969021-9969223,996... 24 7.3
12_02_1070 - 25814741-25815850 28 9.0
01_01_0077 - 585670-585787,585921-586687 28 9.0
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 25.4 bits (53), Expect(2) = 2.1
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = +2
Query: 857 PRPXLXXXXHPPSPPPP 907
PRP HPP PPP
Sbjct: 117 PRPPPPPPPHPPEDPPP 133
Score = 23.4 bits (48), Expect(2) = 2.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 884 HPPSPPPPP 910
HPP PPPP
Sbjct: 137 HPPDHPPPP 145
>10_03_0023 - 7151465-7152111,7152222-7152405
Length = 276
Score = 29.9 bits (64), Expect = 2.9
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +3
Query: 507 PSTXPXXIPXPAPPRXLPXLXXTXPP 584
PS P P P+PP LP L PP
Sbjct: 197 PSLVPPVFPTPSPPSILPPLTPQPPP 222
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 24.2 bits (50), Expect(2) = 3.4
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 658 PXPLPPXPAPXPSXR 702
P P PP PAP P R
Sbjct: 70 PTPPPPPPAPRPPRR 84
Score = 23.8 bits (49), Expect(2) = 3.4
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 817 PPLPXXARNQHXXPPP 864
PP P R H PPP
Sbjct: 76 PPAPRPPRRHHRIPPP 91
>01_05_0490 + 22672241-22674679
Length = 812
Score = 23.8 bits (49), Expect(2) = 4.4
Identities = 9/20 (45%), Positives = 10/20 (50%)
Frame = +2
Query: 848 TSXPRPXLXXXXHPPSPPPP 907
T+ P P PP PPPP
Sbjct: 596 TTNPAPAPPRRPPPPPPPPP 615
Score = 23.8 bits (49), Expect(2) = 4.4
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 887 PPSPPPPP 910
PP PPPPP
Sbjct: 638 PPQPPPPP 645
Score = 23.8 bits (49), Expect(2) = 5.7
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +2
Query: 836 PATNTSXPRPXLXXXXHPPSPPPP 907
P T S P PP PPPP
Sbjct: 647 PTTRRSRKPPQPPSRPAPPPPPPP 670
Score = 23.4 bits (48), Expect(2) = 5.7
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 887 PPSPPPPP 910
PP PPPPP
Sbjct: 699 PPPPPPPP 706
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/18 (61%), Positives = 11/18 (61%)
Frame = +2
Query: 857 PRPXLXXXXHPPSPPPPP 910
P P L PPSPPPPP
Sbjct: 276 PFPHLPPIFSPPSPPPPP 293
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 29.1 bits (62), Expect = 5.1
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 836 PATNTSXPRPXLXXXXHPPSPPPPP 910
PA P P +PP+PPPPP
Sbjct: 730 PAPPLPPPLPAAANKRNPPAPPPPP 754
>01_01_0892 +
7037384-7037795,7038447-7038962,7039507-7039593,
7039698-7039768,7040148-7040224,7040380-7040527,
7040973-7041134,7041374-7041694
Length = 597
Score = 23.8 bits (49), Expect(2) = 5.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 884 HPPSPPPP 907
HPP PPPP
Sbjct: 110 HPPPPPPP 117
Score = 23.4 bits (48), Expect(2) = 5.8
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 887 PPSPPPPP 910
PP PPPPP
Sbjct: 127 PPPPPPPP 134
>12_02_1174 - 26696869-26698191
Length = 440
Score = 28.7 bits (61), Expect = 6.8
Identities = 10/18 (55%), Positives = 11/18 (61%)
Frame = +2
Query: 857 PRPXLXXXXHPPSPPPPP 910
P+P PPSPPPPP
Sbjct: 177 PKPQPPPSLQPPSPPPPP 194
>09_04_0032 - 13953323-13955269
Length = 648
Score = 28.7 bits (61), Expect = 6.8
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 836 PATNTSXPRPXLXXXXHPPSPPPP 907
P TNTS P P PP PPPP
Sbjct: 230 PCTNTSPPSP--SPSPSPPIPPPP 251
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 23.4 bits (48), Expect(2) = 7.3
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +2
Query: 836 PATNTSXPRPXLXXXXHPPSPPPP 907
P ++ P P PP PPPP
Sbjct: 342 PVQPSNAPPPPPPPPPPPPPPPPP 365
Score = 23.4 bits (48), Expect(2) = 7.3
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +2
Query: 887 PPSPPPPP 910
PP PPPPP
Sbjct: 374 PPPPPPPP 381
>10_06_0039 -
9966744-9967535,9968241-9968482,9969021-9969223,
9969333-9970645
Length = 849
Score = 24.2 bits (50), Expect(2) = 7.3
Identities = 7/8 (87%), Positives = 8/8 (100%)
Frame = +2
Query: 887 PPSPPPPP 910
PP+PPPPP
Sbjct: 328 PPAPPPPP 335
Score = 22.6 bits (46), Expect(2) = 7.3
Identities = 9/24 (37%), Positives = 11/24 (45%)
Frame = +2
Query: 836 PATNTSXPRPXLXXXXHPPSPPPP 907
P T + P P PP+PP P
Sbjct: 274 PTTPAAAPVPAPAAAAPPPAPPAP 297
>12_02_1070 - 25814741-25815850
Length = 369
Score = 28.3 bits (60), Expect = 9.0
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 836 PATNTSXPRPXLXXXXHPPSPPPPP 910
P+T P+ L PP PPPPP
Sbjct: 220 PSTQQLPPKIRLSPTQAPPPPPPPP 244
>01_01_0077 - 585670-585787,585921-586687
Length = 294
Score = 28.3 bits (60), Expect = 9.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 842 TNTSXPRPXLXXXXHPPSPPPP 907
+N + P P HPP PPPP
Sbjct: 9 SNPTLPTPPQPHNHHPPVPPPP 30
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,509,419
Number of Sequences: 37544
Number of extensions: 212445
Number of successful extensions: 3968
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3192
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2588957540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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