Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_L18
(899 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 27 0.31
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 25 1.2
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 2.9
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 3.8
DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 23 5.0
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 22 6.6
DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex det... 22 8.8
DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex det... 22 8.8
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 26.6 bits (56), Expect = 0.31
Identities = 16/42 (38%), Positives = 16/42 (38%), Gaps = 4/42 (9%)
Frame = +1
Query: 631 SXXPXPPPPPXPPPXXP----PPPPXPPXPPXXAXAXPGXPP 744
S P P P P P P PP P PP PG PP
Sbjct: 18 SGAPGPQPSPHQSPQAPQRGSPPNPSQGPPP---GGPPGAPP 56
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = +1
Query: 646 PPPPPXPPPXXPPPPPXPPXP 708
P P PPP PP P P
Sbjct: 40 PNPSQGPPPGGPPGAPPSQNP 60
Score = 23.0 bits (47), Expect = 3.8
Identities = 13/38 (34%), Positives = 13/38 (34%), Gaps = 3/38 (7%)
Frame = +1
Query: 640 PXPPP---PPXPPPXXPPPPPXPPXPPXXAXAXPGXPP 744
P P P P P PP P P P A P P
Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.6 bits (51), Expect = 1.2
Identities = 10/18 (55%), Positives = 10/18 (55%)
Frame = +1
Query: 655 PPXPPPXXPPPPPXPPXP 708
PP P P PPPPP P
Sbjct: 338 PPKPAP--PPPPPSSSGP 353
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 631 SXXPXPPPPPXPPPXXPPP 687
S P P PP PPP P
Sbjct: 335 SDTPPKPAPPPPPPSSSGP 353
Score = 23.8 bits (49), Expect = 2.2
Identities = 9/19 (47%), Positives = 9/19 (47%)
Frame = +1
Query: 664 PPPXXPPPPPXPPXPPXXA 720
PP PPPPP P A
Sbjct: 338 PPKPAPPPPPPSSSGPDSA 356
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 646 PPPPPXPP 669
PPPPP PP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 649 PPPPXPPP 672
PPPP PPP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 2.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 679 PPPPPXPP 702
PPPPP PP
Sbjct: 1355 PPPPPPPP 1362
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.0 bits (47), Expect = 3.8
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -1
Query: 209 EEFPPGLRSSADRAESQHQREDEAQNT 129
+EFP S +R S HQR + NT
Sbjct: 102 KEFPNSSSSDDERPNSIHQRASFSLNT 128
>DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride
channel protein.
Length = 383
Score = 22.6 bits (46), Expect = 5.0
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 1/28 (3%)
Frame = -2
Query: 370 IHN-YLQYCFKLNASLVLYHEVYFPKDF 290
+HN + CF NA V +HE+ P +
Sbjct: 84 LHNIWRPDCFFKNAKKVTFHEMSIPNHY 111
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.2 bits (45), Expect = 6.6
Identities = 8/21 (38%), Positives = 13/21 (61%)
Frame = +1
Query: 592 LVNYKSQTHXYYFSXXPXPPP 654
LVN+ ++ + Y+S P P P
Sbjct: 181 LVNFSARRNVEYYSCCPEPYP 201
>DQ325132-1|ABD14146.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.8
Identities = 11/34 (32%), Positives = 12/34 (35%)
Frame = +1
Query: 598 NYKSQTHXYYFSXXPXPPPPPXPPPXXPPPPPXP 699
NYK Y + P P P PP P P
Sbjct: 112 NYKKLYKNYIINIEQIPVPVPVYYGNFPPRPMGP 145
>DQ325131-1|ABD14145.1| 189|Apis mellifera complementary sex
determiner protein.
Length = 189
Score = 21.8 bits (44), Expect = 8.8
Identities = 11/34 (32%), Positives = 12/34 (35%)
Frame = +1
Query: 598 NYKSQTHXYYFSXXPXPPPPPXPPPXXPPPPPXP 699
NYK Y + P P P PP P P
Sbjct: 112 NYKKLYKNYIINIEQIPVPVPVYYGNFPPRPMGP 145
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 210,616
Number of Sequences: 438
Number of extensions: 6847
Number of successful extensions: 56
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29146299
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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