Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_L15
(869 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC530.10c |anc1||adenine nucleotide carrier Anc1|Schizosacchar... 69 7e-13
SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces ... 42 2e-04
SPAC17H9.08 |||mitochondrial coenzyme A transporter|Schizosaccha... 40 6e-04
SPBC12D12.05c |||mitochondrial carrier, calcium binding subfamil... 34 0.030
SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|c... 33 0.040
SPAC4G9.20c |||mitochondrial carrier with solute carrier repeats... 32 0.092
SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|c... 32 0.092
SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomy... 30 0.37
SPBC1604.04 |||thiamine pyrophosphate transporter|Schizosaccharo... 29 0.86
SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyce... 28 2.0
SPAC6B12.05c |||chromatin remodeling complex subunit |Schizosacc... 27 3.5
SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter |Schiz... 26 6.1
SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces po... 26 6.1
SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1 |Schizosacc... 26 8.0
>SPBC530.10c |anc1||adenine nucleotide carrier
Anc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 322
Score = 69.3 bits (162), Expect = 7e-13
Identities = 42/98 (42%), Positives = 51/98 (52%)
Frame = +3
Query: 393 QADRRRPALQGYRRCLRPYPQGSRGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLG 572
+A R +G C + G++S WRGN ANV+RYFPTQALNFAFKDK+K++F G
Sbjct: 63 RAGRLSHRYKGIGECFKR-TAAEEGVISLWRGNTANVLRYFPTQALNFAFKDKFKKMF-G 120
Query: 573 GVDRRRSSGVTSLVIWPPVVPPEPTSLCFVYPLDXART 686
R SL FVY LD ART
Sbjct: 121 YKKERDGYAKWFAGNLASGGAAGAASLLFVYSLDYART 158
Score = 58.8 bits (136), Expect = 9e-10
Identities = 33/61 (54%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Frame = +1
Query: 289 FAKDFLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKGAG 465
F DF+ GG+SAAVSKTA APIERVKLL+Q Q + + RYKGI + F R G
Sbjct: 27 FFFDFMMGGVSAAVSKTAAAPIERVKLLIQNQDEMIRAGRLSHRYKGIGECFKRTAAEEG 86
Query: 466 V 468
V
Sbjct: 87 V 87
>SPAPB17E12.12c |||mitochondrial transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 41.5 bits (93), Expect = 2e-04
Identities = 16/28 (57%), Positives = 26/28 (92%)
Frame = +1
Query: 304 LAGGISAAVSKTAVAPIERVKLLLQVQH 387
L+GG++A VS+TAV+P+ER+K++ QVQ+
Sbjct: 25 LSGGVAATVSRTAVSPLERMKIIFQVQN 52
Score = 35.5 bits (78), Expect = 0.010
Identities = 25/74 (33%), Positives = 32/74 (43%)
Frame = +3
Query: 465 GLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDRRRSSGVTSLVIWPPVVPPEP 644
GL+ F+RGN N +R FP A+ FA + KQ L + L+
Sbjct: 71 GLIGFFRGNGTNCLRAFPYGAVQFATFNMLKQRALKNRSHQNLENHERLLFG---AIAGA 127
Query: 645 TSLCFVYPLDXART 686
S YPLD ART
Sbjct: 128 ASCATTYPLDIART 141
>SPAC17H9.08 |||mitochondrial coenzyme A
transporter|Schizosaccharomyces pombe|chr 1|||Manual
Length = 326
Score = 39.5 bits (88), Expect = 6e-04
Identities = 21/52 (40%), Positives = 31/52 (59%)
Frame = +1
Query: 295 KDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRI 450
K +AGG + V+K+ VAP++RVK+L Q H S + A R+ G+ A I
Sbjct: 19 KSGIAGGTAGCVAKSVVAPLDRVKILYQTNHASYRGYAYSRH-GLYKAIKHI 69
>SPBC12D12.05c |||mitochondrial carrier, calcium binding
subfamily|Schizosaccharomyces pombe|chr 2|||Manual
Length = 426
Score = 33.9 bits (74), Expect = 0.030
Identities = 14/33 (42%), Positives = 23/33 (69%)
Frame = +1
Query: 277 DPVAFAKDFLAGGISAAVSKTAVAPIERVKLLL 375
DP F++GGI+ VS+T AP++R+K++L
Sbjct: 123 DPKNNVGYFISGGIAGIVSRTCTAPLDRLKVML 155
Score = 27.1 bits (57), Expect = 3.5
Identities = 9/32 (28%), Positives = 22/32 (68%)
Frame = +1
Query: 301 FLAGGISAAVSKTAVAPIERVKLLLQVQHVSK 396
+LAGG++ +V++ + P++ +K +Q +S+
Sbjct: 232 YLAGGMAGSVAQMFIYPVDTLKFRIQCSDLSR 263
>SPAC8C9.12c |||iron ion transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 303
Score = 33.5 bits (73), Expect = 0.040
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Frame = +1
Query: 304 LAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKGAGV-SFHS 480
++GG+S A++ + P++ VK LLQ + S I ++ KG +D I G+ SF
Sbjct: 209 ISGGLSGAIASSLTTPLDVVKTLLQTRG-SSSIPEVRKCKGSLDVVRFIYNYGGIPSFFK 267
Query: 481 GV 486
G+
Sbjct: 268 GI 269
>SPAC4G9.20c |||mitochondrial carrier with solute carrier
repeats|Schizosaccharomyces pombe|chr 1|||Manual
Length = 302
Score = 32.3 bits (70), Expect = 0.092
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = +1
Query: 286 AFAKDFLAGGISAAVSKTAVA-PIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKGA 462
+F KDFLA G+S V++ V P + VK+ LQ Q I Y +D +I K
Sbjct: 16 SFTKDFLA-GVSGGVAQVLVGQPFDCVKVRLQSQSNVSPI-----YNNALDCVKKISKNE 69
Query: 463 GV-SFHSGVV 489
G+ +F+ G V
Sbjct: 70 GLAAFYKGTV 79
Score = 31.1 bits (67), Expect = 0.21
Identities = 19/64 (29%), Positives = 31/64 (48%)
Frame = +1
Query: 280 PVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAFVRIPKG 459
PV + +++G IS + V P+E V++ LQ+Q K + Y G D +I
Sbjct: 109 PVTMPQYYVSGAISGLANSFLVGPVEHVRIRLQIQ-TGKNVL----YHGPWDCIKKISSQ 163
Query: 460 AGVS 471
G+S
Sbjct: 164 YGLS 167
>SPAC139.02c |oac1||anion transporter|Schizosaccharomyces pombe|chr
1|||Manual
Length = 320
Score = 32.3 bits (70), Expect = 0.092
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Frame = +1
Query: 301 FLAGGISAAVSKTAVAPIERVKLLLQVQ-HVSKQIAADQRYKGIVDAFVRIPKGAGV 468
FL+GG++A + T P E +K Q+Q ++K + + YK + AF I + G+
Sbjct: 27 FLSGGLAACGAVTLTNPFEVIKTRFQLQGQLTKLDPSKRIYKSVGQAFSLIARHEGI 83
>SPAC688.09 |||pyrimidine nucletide transporter |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 361
Score = 30.3 bits (65), Expect = 0.37
Identities = 17/47 (36%), Positives = 26/47 (55%)
Frame = +1
Query: 238 VKIT*SNKMSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQ 378
V +T +N SN P + F+AGG++ + A AP++ VK LQ
Sbjct: 32 VLLTKANNASNERAPPPLSH-FIAGGVAGMLGAIATAPLDVVKTRLQ 77
>SPBC1604.04 |||thiamine pyrophosphate
transporter|Schizosaccharomyces pombe|chr 2|||Manual
Length = 314
Score = 29.1 bits (62), Expect = 0.86
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 304 LAGGISAAVSKTAVAPIERVKLLLQVQHVS 393
LAGGIS+ + + +AP + +K+ +Q+ S
Sbjct: 21 LAGGISSVICRFMIAPFDVIKIRMQITQSS 50
>SPAC227.03c |||mitochondrial NAD+ transporter|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 27.9 bits (59), Expect = 2.0
Identities = 13/30 (43%), Positives = 17/30 (56%)
Frame = +1
Query: 295 KDFLAGGISAAVSKTAVAPIERVKLLLQVQ 384
KD +AGG + S VAP++ VK Q Q
Sbjct: 7 KDAIAGGAAGLASSLVVAPLDVVKTRKQAQ 36
>SPAC6B12.05c |||chromatin remodeling complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 295
Score = 27.1 bits (57), Expect = 3.5
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 728 NSPVSETASXXXSSPTGLIGXVQXFRCVRAK 820
N+P S++ S + P I Q F+CVR K
Sbjct: 246 NNPTSDSISRSKAVPKDRINMYQPFQCVRFK 276
>SPAC328.09 |||2-oxoadipate and 2-oxoglutarate transporter
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 298
Score = 26.2 bits (55), Expect = 6.1
Identities = 19/76 (25%), Positives = 33/76 (43%)
Frame = +3
Query: 387 RQQADRRRPALQGYRRCLRPYPQGSRGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVF 566
R Q + G CL+ + + G +RG ++ P +AL FA D Y +++
Sbjct: 35 RMQLSVGKSDYNGTFDCLKKIVK-NEGPHRLYRGILPPILMEAPKRALKFASNDTYSKLW 93
Query: 567 LGGVDRRRSSGVTSLV 614
R+ SS S++
Sbjct: 94 RKVFKRKDSSPALSIL 109
>SPAC17A2.12 |||ATP-dependent DNA helicase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 897
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +3
Query: 138 YEITPNLLFKNQELVFRDPPSACAATPTSTY 230
YE+ N F N PP AC+ TS Y
Sbjct: 362 YEMKQNDAFNNNNPATATPPPACSLLETSWY 392
>SPAC17H9.10c |ddb1||damaged DNA binding protein Ddb1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1072
Score = 25.8 bits (54), Expect = 8.0
Identities = 13/36 (36%), Positives = 20/36 (55%)
Frame = -1
Query: 443 TKASTIPL*RWSAAICLLTCCTWSSSLTRSMGATAV 336
T+ + + + WSA I +LT C SLT S+ T +
Sbjct: 533 TEENVVYVGLWSADIIMLTYCQDGISLTHSLKLTDI 568
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,229,858
Number of Sequences: 5004
Number of extensions: 62540
Number of successful extensions: 198
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 178
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 198
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 434475230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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