Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_L15
         (869 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase p...   126   4e-31
AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase p...   126   4e-31
DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450 monoo...    22   6.4  

>AY568009-1|AAS73299.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  126 bits (303), Expect = 4e-31
 Identities = 84/193 (43%), Positives = 101/193 (52%), Gaps = 3/193 (1%)
 Frame = +1

Query: 262 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 441
           MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1   MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60

Query: 442 VRIPKGAG-VSFHSGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLTEDAVLALLRW*S 618
           VRIPK  G +S+  G +                                D     LR+  
Sbjct: 61  VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGV----DKNTQFLRYFV 116

Query: 619 GLRWCRRSPPLCASC--TPSTXHVPRLAADVGXGDGXREFSGFRNCIXXXFXSDRSDRXC 792
           G      +    + C   P      RLAADVG   G REF+G  NC+   F +D      
Sbjct: 117 GNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLY 176

Query: 793 XXVSVCPCQGIII 831
               V   QGIII
Sbjct: 177 RGFGV-SVQGIII 188



 Score = 99.1 bits (236), Expect = 5e-23
 Identities = 52/89 (58%), Positives = 58/89 (65%)
 Frame = +3

Query: 420 QGYRRCLRPYPQGSRGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDRRRSSG 599
           +G   C    P+  +G LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVD+     
Sbjct: 54  KGMIDCFVRIPK-EQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFL 112

Query: 600 VTSLVIWPPVVPPEPTSLCFVYPLDXART 686
              +           TSLCFVYPLD ART
Sbjct: 113 RYFVGNLASGGAAGATSLCFVYPLDFART 141


>AY332626-1|AAQ24500.1|  300|Apis mellifera ADP/ATP translocase
           protein.
          Length = 300

 Score =  126 bits (303), Expect = 4e-31
 Identities = 84/193 (43%), Positives = 101/193 (52%), Gaps = 3/193 (1%)
 Frame = +1

Query: 262 MSNLADPVAFAKDFLAGGISAAVSKTAVAPIERVKLLLQVQHVSKQIAADQRYKGIVDAF 441
           MS LADPVAFAKDFLAGG++AA+SKT VAPIERVKLLLQVQH+SKQI+ +QRYKG++D F
Sbjct: 1   MSGLADPVAFAKDFLAGGVAAAISKTTVAPIERVKLLLQVQHISKQISEEQRYKGMIDCF 60

Query: 442 VRIPKGAG-VSFHSGVVXXXXXXXXXXXXXXXXXXXXXXXXXXXAVLTEDAVLALLRW*S 618
           VRIPK  G +S+  G +                                D     LR+  
Sbjct: 61  VRIPKEQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGV----DKNTQFLRYFV 116

Query: 619 GLRWCRRSPPLCASC--TPSTXHVPRLAADVGXGDGXREFSGFRNCIXXXFXSDRSDRXC 792
           G      +    + C   P      RLAADVG   G REF+G  NC+   F +D      
Sbjct: 117 GNLASGGAAGATSLCFVYPLDFARTRLAADVGKAGGEREFTGLGNCLTKIFKADGITGLY 176

Query: 793 XXVSVCPCQGIII 831
               V   QGIII
Sbjct: 177 RGFGV-SVQGIII 188



 Score = 99.1 bits (236), Expect = 5e-23
 Identities = 52/89 (58%), Positives = 58/89 (65%)
 Frame = +3

Query: 420 QGYRRCLRPYPQGSRGLLSFWRGNFANVIRYFPTQALNFAFKDKYKQVFLGGVDRRRSSG 599
           +G   C    P+  +G LS+WRGN ANVIRYFPTQALNFAFKDKYKQVFLGGVD+     
Sbjct: 54  KGMIDCFVRIPK-EQGFLSYWRGNLANVIRYFPTQALNFAFKDKYKQVFLGGVDKNTQFL 112

Query: 600 VTSLVIWPPVVPPEPTSLCFVYPLDXART 686
              +           TSLCFVYPLD ART
Sbjct: 113 RYFVGNLASGGAAGATSLCFVYPLDFART 141


>DQ244074-1|ABB36784.1|  517|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 517

 Score = 22.2 bits (45), Expect = 6.4
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +1

Query: 664 TPSTXHVPRLAADVGXG 714
           TP+T H P L A  G G
Sbjct: 446 TPTTPHSPLLVAPFGAG 462


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 229,445
Number of Sequences: 438
Number of extensions: 4754
Number of successful extensions: 13
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28159464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)