Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_L14
(1195 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 31 0.020
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 25 1.3
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 23 7.0
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 22 9.3
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 31.1 bits (67), Expect = 0.020
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Frame = +2
Query: 644 PXPPPXPAQXPXPPPPPXPRXPXAXPPXXXPP--PP 745
P P P P Q P P P P PP PP PP
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56
Score = 29.1 bits (62), Expect = 0.081
Identities = 17/48 (35%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Frame = +1
Query: 604 PPXXXPRXHXGAXAAPPPPXRXXSXPPXP---PPXPXPPGXPPXXXPS 738
P P +P P R PP P PP PPG PP PS
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQR--GSPPNPSQGPPPGGPPGAPPSQNPS 61
Score = 27.1 bits (57), Expect = 0.33
Identities = 12/35 (34%), Positives = 12/35 (34%)
Frame = +2
Query: 680 PPPPPXPRXPXAXPPXXXPPPPXXGAPRGXXXXXP 784
P P P P P PP P G P G P
Sbjct: 21 PGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAP 55
Score = 25.8 bits (54), Expect = 0.75
Identities = 14/46 (30%), Positives = 16/46 (34%), Gaps = 1/46 (2%)
Frame = +2
Query: 653 PPXPAQXPXPPPPPXPRXP-XAXPPXXXPPPPXXGAPRGXXXXXPA 787
P A P P P P+ P PP PP G P P+
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPS 61
Score = 25.4 bits (53), Expect = 0.99
Identities = 14/38 (36%), Positives = 15/38 (39%)
Frame = +1
Query: 646 APPPPXRXXSXPPXPPPXPXPPGXPPXXXPSXPXXGRP 759
AP PP S PP P PG P P+ P P
Sbjct: 415 APMPPIPNMSNMSGMPPLPNMPGSMP-TMPTMPSMAGP 451
Score = 25.0 bits (52), Expect = 1.3
Identities = 12/42 (28%), Positives = 13/42 (30%)
Frame = +1
Query: 634 GAXAAPPPPXRXXSXPPXPPPXPXPPGXPPXXXPSXPXXGRP 759
GA P P + P P G PP P P P
Sbjct: 19 GAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNP 60
Score = 24.2 bits (50), Expect = 2.3
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +1
Query: 679 PPXPPPXPXPPGXPPXXXPSXPXXGRPPGLXSXXPSXPPP 798
P P P P P P P G PP P PP
Sbjct: 16 PSSGAPGPQPS---PHQSPQAPQRGSPPNPSQGPPPGGPP 52
Score = 22.6 bits (46), Expect = 7.0
Identities = 11/36 (30%), Positives = 12/36 (33%)
Frame = +1
Query: 883 PXSTPSPPPXXAXXPXPPXXPPRPXPRHLPXXPPPQ 990
P +P P PP P P P PP Q
Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQ 58
Score = 22.6 bits (46), Expect = 7.0
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +3
Query: 822 PTPXRXPPXQRPXXRPPPRXP 884
P P + PP P PP + P
Sbjct: 40 PNPSQGPPPGGPPGAPPSQNP 60
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 25.0 bits (52), Expect = 1.3
Identities = 18/59 (30%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Frame = +2
Query: 596 PPPPRXXXPEXT*VXXPXPPPXPAQXPXPPPPPXPRXPXAXPPXXXP---PPPXXGAPR 763
PP PR + P P PP P R P A P P P P PR
Sbjct: 83 PPHPRLRREAESEAEPGNNRPVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPR 141
Score = 23.0 bits (47), Expect = 5.3
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +1
Query: 934 PXXPPRPXPRHLPXXPPPQXXPXXXAP-XLPXP-PPTP 1041
P P+P P H P+ P P +P P PP P
Sbjct: 103 PVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHP 140
Score = 23.0 bits (47), Expect = 5.3
Identities = 19/59 (32%), Positives = 19/59 (32%), Gaps = 3/59 (5%)
Frame = +2
Query: 596 PPPPRXXXPEXT*VXXPXPPPXPAQXPXPPPPPXPRXPXAXPPXXXP---PPPXXGAPR 763
PP PR P P P PP P R P A P P P P PR
Sbjct: 111 PPHPRLRREPEAEPGNNRPVYIPQ--PRPPHPRLRREPEAEPGNNRPVYIPQPRPPHPR 167
Score = 23.0 bits (47), Expect = 5.3
Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = +1
Query: 934 PXXPPRPXPRHLPXXPPPQXXPXXXAP-XLPXP-PPTP 1041
P P+P P H P+ P P +P P PP P
Sbjct: 129 PVYIPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHP 166
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 22.6 bits (46), Expect = 7.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +2
Query: 653 PPXPAQXPXPPPPPXPRXP 709
PP PA PPPPP P
Sbjct: 338 PPKPAP---PPPPPSSSGP 353
Score = 22.2 bits (45), Expect = 9.3
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +1
Query: 679 PPXPPPXPXPP 711
PP P P P PP
Sbjct: 338 PPKPAPPPPPP 348
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 22.2 bits (45), Expect = 9.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 668 QXPXPPPPP 694
Q P PPPPP
Sbjct: 1353 QQPPPPPPP 1361
Score = 22.2 bits (45), Expect = 9.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 668 QXPXPPPPP 694
Q P PPPPP
Sbjct: 1354 QPPPPPPPP 1362
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 285,867
Number of Sequences: 438
Number of extensions: 15877
Number of successful extensions: 42
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29
length of database: 146,343
effective HSP length: 59
effective length of database: 120,501
effective search space used: 40729338
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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