Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_L13
(906 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces po... 90 5e-19
SPAC732.01 |vma11||V-type ATPase proteolipid subunit|Schizosacch... 78 2e-15
SPAC2C4.13 |vma16||V-type ATPase subunit c''|Schizosaccharomyces... 38 0.003
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 37 0.003
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 34 0.024
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.042
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 33 0.056
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.13
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 30 0.52
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 0.69
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.69
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 0.91
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.91
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 28 1.6
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 2.8
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 3.7
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 27 4.8
SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase Lkh1|Schi... 27 4.8
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 26 6.4
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 26 6.4
>SPAC1B3.14 |vma3||V-type ATPase subunit c|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 161
Score = 89.8 bits (213), Expect = 5e-19
Identities = 38/56 (67%), Positives = 49/56 (87%)
Frame = +2
Query: 203 PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 370
P+Y PFFGVMG +AI+F++ GAAYGTAK+G GI+AM V+RP+LI+K+ IPVVMAG
Sbjct: 7 PVYAPFFGVMGCTAAIVFASFGAAYGTAKAGVGISAMGVLRPDLIVKNTIPVVMAG 62
Score = 63.3 bits (147), Expect = 5e-11
Identities = 36/61 (59%), Positives = 43/61 (70%)
Frame = +3
Query: 369 GIIAIYGLVXAVLIAGALQEPANYPLYKXFIHLGAGLAVXFSGLAARXAIGIXXXARXRG 548
GIIAIYGLV +VLI+G L++ + LY FI LGAGL+V +GLAA AIGI A RG
Sbjct: 62 GIIAIYGLVVSVLISGNLKQILS--LYSGFIQLGAGLSVGLAGLAAGFAIGIVGDAGVRG 119
Query: 549 T 551
T
Sbjct: 120 T 120
>SPAC732.01 |vma11||V-type ATPase proteolipid
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 162
Score = 77.8 bits (183), Expect = 2e-15
Identities = 33/56 (58%), Positives = 43/56 (76%)
Frame = +2
Query: 203 PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAG 370
PIY FFG G ++++FS LGA YGTA +G GIAA+ RPE++MKS+IPVVM+G
Sbjct: 7 PIYSSFFGFAGVCASMVFSCLGAGYGTALAGRGIAAVGAFRPEIVMKSLIPVVMSG 62
Score = 61.3 bits (142), Expect = 2e-10
Identities = 29/52 (55%), Positives = 37/52 (71%)
Frame = +3
Query: 369 GIIAIYGLVXAVLIAGALQEPANYPLYKXFIHLGAGLAVXFSGLAARXAIGI 524
GII +YGLV +VLIAG + +Y L+ FIHL AGLAV +G+AA AIG+
Sbjct: 62 GIIGVYGLVMSVLIAGDMSPDNDYSLFSGFIHLSAGLAVGLTGVAAGYAIGV 113
>SPAC2C4.13 |vma16||V-type ATPase subunit c''|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 199
Score = 37.5 bits (83), Expect = 0.003
Identities = 16/47 (34%), Positives = 28/47 (59%)
Frame = +2
Query: 221 FGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVV 361
+G++G AS + F +GAA+G GT I +V P + K++I ++
Sbjct: 45 WGLLGIASCVAFGIIGAAWGIFICGTSILGGAVKAPRIKTKNLISII 91
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 37.1 bits (82), Expect = 0.003
Identities = 14/25 (56%), Positives = 14/25 (56%)
Frame = +3
Query: 786 PXXPNPPPPSXXPXPPXLPPPPPXP 860
P P PPPP PP PPPPP P
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 604 PPPPXGXXXXPXIPPPXPP 660
PPPP P PPP PP
Sbjct: 11 PPPPPPGFEPPSQPPPPPP 29
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 604 PPPPXGXXXXPXIPPPXPP 660
PPPP G PPP PP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 34.3 bits (75), Expect = 0.024
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 777 PXXPXXPNPPPPSXXPXPPXLPPPPPXPXP 866
P P PPPPS P P P PP P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.9 bits (64), Expect = 0.52
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = +3
Query: 573 PPXINSSSXXPPXTXWXPXPTXXPPPLXPPXTXPQXPP 686
PP +++ + PP P P+ P P PP P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 29.9 bits (64), Expect = 0.52
Identities = 13/29 (44%), Positives = 13/29 (44%), Gaps = 1/29 (3%)
Frame = +3
Query: 777 PXXPXXPNPPPPSX-XPXPPXLPPPPPXP 860
P P PPPP P PP PP P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGP 1727
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/40 (35%), Positives = 15/40 (37%), Gaps = 1/40 (2%)
Frame = +3
Query: 567 PXPPXINSSSXXPPXTXWXPX-PTXXPPPLXPPXTXPQXP 683
P PP S PP P P PPP P + P P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.042
Identities = 30/104 (28%), Positives = 31/104 (29%), Gaps = 4/104 (3%)
Frame = +3
Query: 567 PXPPXINS--SSXXPPXTXWXPXPTXXPPPLXPPXTXPQXPPXXXXXXXXXXXXXXXXXX 740
P PP N+ S PP P P PPP P T Q PP
Sbjct: 340 PPPPRSNAAGSIPLPPQGRSAPPP---PPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Query: 741 XXXXXXXXXXXXPXXPXXPN-PPPPSXXP-XPPXLPPPPPXPXP 866
P P PPS P PP LPP P P
Sbjct: 397 GRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLP 440
Score = 32.7 bits (71), Expect = 0.074
Identities = 15/35 (42%), Positives = 16/35 (45%), Gaps = 5/35 (14%)
Frame = +3
Query: 777 PXXPXXPNPPP-----PSXXPXPPXLPPPPPXPXP 866
P P P PP P+ P PP P PPP P P
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAP 482
Score = 29.5 bits (63), Expect = 0.69
Identities = 24/108 (22%), Positives = 29/108 (26%)
Frame = +3
Query: 543 RGTXSAALPXPPXINSSSXXPPXTXWXPXPTXXPPPLXPPXTXPQXPPXXXXXXXXXXXX 722
R + ++P PP S+ PP P PPPL P
Sbjct: 344 RSNAAGSIPLPPQ-GRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPA 402
Query: 723 XXXXXXXXXXXXXXXXXXPXXPXXPNPPPPSXXPXPPXLPPPPPXPXP 866
P P P+ PP PP LP P P
Sbjct: 403 LPPLGNASRTSTPPVPTPPSLP--PSAPPSLPPSAPPSLPMGAPAAPP 448
Score = 27.9 bits (59), Expect = 2.1
Identities = 26/94 (27%), Positives = 28/94 (29%)
Frame = +3
Query: 573 PPXINSSSXXPPXTXWXPXPTXXPPPLXPPXTXPQXPPXXXXXXXXXXXXXXXXXXXXXX 752
PP N+S P P PT PP PP P PP
Sbjct: 404 PPLGNASRTSTP-----PVPT---PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPI 455
Query: 753 XXXXXXXXPXXPXXPNPPPPSXXPXPPXLPPPPP 854
P P P PP+ P PP P P P
Sbjct: 456 APPLPAGMPAAP----PLPPAA-PAPPPAPAPAP 484
Score = 26.6 bits (56), Expect = 4.8
Identities = 12/30 (40%), Positives = 13/30 (43%)
Frame = +3
Query: 777 PXXPXXPNPPPPSXXPXPPXLPPPPPXPXP 866
P P P+ PP P P PPP P P
Sbjct: 231 PIPPSIPSSRPPERVP-SLSAPAPPPIPPP 259
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.1 bits (72), Expect = 0.056
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = +3
Query: 777 PXXPXXPNPPPPSXXPXPPXLPPPPPXPXP 866
P P PPPP P PPPP P P
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 31.5 bits (68), Expect = 0.17
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 786 PXXPNPPPPSXXPXPPXLPPPPP 854
P P PPP PP PPPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPPPPPPP 783
Score = 29.1 bits (62), Expect = 0.91
Identities = 12/25 (48%), Positives = 14/25 (56%), Gaps = 3/25 (12%)
Frame = +3
Query: 795 PNPPPPSXX---PXPPXLPPPPPXP 860
P PPPP+ P P +P PPP P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 28.3 bits (60), Expect = 1.6
Identities = 12/25 (48%), Positives = 13/25 (52%), Gaps = 4/25 (16%)
Frame = +3
Query: 804 PPPSXXPXPPXLP----PPPPXPXP 866
P P+ P PP P PPPP P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 27.9 bits (59), Expect = 2.1
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +3
Query: 795 PNPPPPSXXPXPPXLPPPPPXPXP 866
P PPP P P P P P P P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAP 756
Score = 27.5 bits (58), Expect = 2.8
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +3
Query: 777 PXXPXXPNPPPPSXXPXPPXLPPPP 851
P P PPP PP PPPP
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 604 PPPPXGXXXXPXIPPPXPP 660
PPPP G PPP PP
Sbjct: 764 PPPPPGVAGAGPPPPPPPP 782
Score = 27.1 bits (57), Expect = 3.7
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +1
Query: 604 PPPPXGXXXXPXIPPPXPP 660
PPPP P PPP PP
Sbjct: 765 PPPPGVAGAGPPPPPPPPP 783
Score = 25.8 bits (54), Expect = 8.5
Identities = 10/24 (41%), Positives = 11/24 (45%)
Frame = +3
Query: 795 PNPPPPSXXPXPPXLPPPPPXPXP 866
P P P P P + PPP P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 22.2 bits (45), Expect(2) = 9.5
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 878 PPXPPPPLP 904
PP PPPP P
Sbjct: 775 PPPPPPPPP 783
Score = 21.4 bits (43), Expect(2) = 9.5
Identities = 10/35 (28%), Positives = 11/35 (31%)
Frame = +2
Query: 794 PQPPASLXXXXXXXXXXXXXXXXXXXPXPPXPPPP 898
P PPA + PP PPPP
Sbjct: 734 PPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.9 bits (69), Expect = 0.13
Identities = 17/34 (50%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
Frame = -2
Query: 659 GGXGGGXXGXXXXPXG-GGGXXGRGINXGGXG*G 561
GG GGG G P G GGG G G GG G G
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Score = 30.7 bits (66), Expect = 0.30
Identities = 16/32 (50%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Frame = -3
Query: 865 GXGXGGGGGSXGGXGXXEGG--GGLGXXGXXG 776
G G GG GG GG G GG GG G G G
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 29.1 bits (62), Expect = 0.91
Identities = 26/83 (31%), Positives = 26/83 (31%), Gaps = 2/83 (2%)
Frame = -3
Query: 865 GXGXGG-GGGSXGGXGXXEGGGGLGXXGXXGXXXXXXXXXXXXGXXXXXXXXXXXXXXXG 689
G G GG GGGS G G GG G G G G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 688 XGGXWGXVXGGXRG-GGXXVGXG 623
GG G GG G GG G G
Sbjct: 247 FGGGLGGFGGGPGGFGGGPGGHG 269
Score = 27.9 bits (59), Expect = 2.1
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Frame = -2
Query: 659 GGXGGGXXGXXXXP---XGGGGXXGRGINXGGXG 567
GG GGG G P G GG G G + GG G
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHG 224
Score = 27.5 bits (58), Expect = 2.8
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -2
Query: 659 GGXGGGXXGXXXXPXG-GGGXXGRG 588
GG GGG G P G GGG G G
Sbjct: 245 GGFGGGLGGFGGGPGGFGGGPGGHG 269
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.9 bits (64), Expect = 0.52
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 847 GGGSXGGXGXXEGGGGLGXXGXXG 776
GGGS GG G G GG G G G
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFG 469
Score = 26.2 bits (55), Expect = 6.4
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -2
Query: 650 GGGXXGXXXXPXGGGGXXGRGINXGGXG*G 561
GGG G G GG GRG GG G G
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRG 475
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 29.5 bits (63), Expect = 0.69
Identities = 23/103 (22%), Positives = 28/103 (27%), Gaps = 3/103 (2%)
Frame = +3
Query: 567 PXPPXINSSSXXPPXTXWXPXPTXXPPPLXPPXTX---PQXPPXXXXXXXXXXXXXXXXX 737
P +N+ + P + P P+ PP P T PP
Sbjct: 148 PSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADAN 207
Query: 738 XXXXXXXXXXXXXPXXPXXPNPPPPSXXPXPPXLPPPPPXPXP 866
P P P P PP PPPPP P
Sbjct: 208 EPDDYYSSGRAVSPEIPPTYTPKQADPLPAPP--PPPPPTLPP 248
Score = 23.4 bits (48), Expect(2) = 3.4
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +3
Query: 588 SSSXXPPXTXWXPXPTXXPPPLXPPXTXPQ 677
S P T P PPP PP PQ
Sbjct: 220 SPEIPPTYTPKQADPLPAPPPPPPPTLPPQ 249
Score = 21.8 bits (44), Expect(2) = 3.4
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 798 NPPPPSXXPXPPXLPP 845
N PPP P P PP
Sbjct: 271 NIPPPPATPSQPPRPP 286
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.69
Identities = 24/96 (25%), Positives = 29/96 (30%), Gaps = 2/96 (2%)
Frame = +3
Query: 585 NSSSXXPPXTXWXPXPTXX--PPPLXPPXTXPQXPPXXXXXXXXXXXXXXXXXXXXXXXX 758
+S+S PP P P PP PP P PP
Sbjct: 118 SSASAAPPSAPAPPTPQSELRPPTSAPPR--PSIPPPSPASAPPIPSKAPPIPSSLPPPA 175
Query: 759 XXXXXXPXXPXXPNPPPPSXXPXPPXLPPPPPXPXP 866
P P+ P + P PP +PPPP P
Sbjct: 176 QPAAPVKSPPSAPSLPS-AVPPMPPKVPPPPLSQAP 210
Score = 27.9 bits (59), Expect = 2.1
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +3
Query: 795 PNPPPPSXXPXPPXLPPPPP 854
P PPPP P P P PP
Sbjct: 3 PAPPPPPPAPAPAAAAPAPP 22
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 29.1 bits (62), Expect = 0.91
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 777 PXXPXXPNPPPPSXXPXPPXLPPPPPXP 860
P P P PP P P +P PP P
Sbjct: 659 PEAPSVPQPPAAPVVPEVPSVPQPPAVP 686
Score = 28.7 bits (61), Expect = 1.2
Identities = 11/28 (39%), Positives = 12/28 (42%)
Frame = +3
Query: 777 PXXPXXPNPPPPSXXPXPPXLPPPPPXP 860
P P P PP P P +P PP P
Sbjct: 584 PEVPSVPQPPVAPVVPEAPSVPQPPVAP 611
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.1 bits (62), Expect = 0.91
Identities = 26/100 (26%), Positives = 28/100 (28%), Gaps = 2/100 (2%)
Frame = +3
Query: 573 PPXINSSSXXPPXTXWXPXPTXXPPPLXPPXTXPQXP-PXXXXXXXXXXXXXXXXXXXXX 749
PP SS PP P P+ PP+ P T P P P
Sbjct: 1012 PPVPKLSSKAPPV----PLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVP 1067
Query: 750 XXXXXXXXXPXXPXXPNPPPPS-XXPXPPXLPPPPPXPXP 866
P P P PS P P PP P P
Sbjct: 1068 APSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKP 1107
Score = 26.6 bits (56), Expect = 4.8
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +3
Query: 576 PXINSSSXXPPXTXWXPXPTXXPPPLXPPXTXPQXP 683
P + S PP P P+ PP+ PP T P P
Sbjct: 1189 PPVPPPSEAPPV----PKPSVGVPPVPPPSTAPPVP 1220
Score = 26.2 bits (55), Expect = 6.4
Identities = 27/115 (23%), Positives = 32/115 (27%), Gaps = 11/115 (9%)
Frame = +3
Query: 555 SAALPXPPXINSSSXXP-PXTXWXPXPTXX-PPPLXPPXTXPQXPPXXXXXXXXXXXXXX 728
S A+P P + + P P P P PP+ P P
Sbjct: 1108 SVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVA 1167
Query: 729 XXXXXXXXXXXXXXXXPXXPXXPNPPPPSXXPXP------PXLPPP---PPXPXP 866
P P PPP P P P +PPP PP P P
Sbjct: 1168 APPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTP 1222
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 28.3 bits (60), Expect = 1.6
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 865 GXGXGGGGGSXGGXGXXEGGGGLGXXGXXG 776
G G GG G GG G GG G G G
Sbjct: 37 GGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/21 (61%), Positives = 13/21 (61%), Gaps = 1/21 (4%)
Frame = -3
Query: 853 GGGGGSXGGXGXXEGG-GGLG 794
GG GGS GG G GG GG G
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFG 29
Score = 27.5 bits (58), Expect = 2.8
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = -3
Query: 865 GXGXGGGGGSXGGXGXXEGGGGLGXXGXXG 776
G G G GG GG G GG G G G G
Sbjct: 27 GFGGGRGGARGGGRGGARGGRG-GRGGARG 55
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/20 (55%), Positives = 12/20 (60%)
Frame = -3
Query: 865 GXGXGGGGGSXGGXGXXEGG 806
G GG GGS GG G +GG
Sbjct: 51 GGARGGRGGSSGGRGGAKGG 70
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -3
Query: 859 GXGGGGGSXGGXGXXEGGGGLGXXGXXG 776
G GG G GG GG G G G G
Sbjct: 10 GRGGSRGGRGGFNGGRGGFGGGRGGARG 37
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.5 bits (58), Expect = 2.8
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +3
Query: 795 PNPPPPSXXPXPPXLPPPPP 854
P PP P+ P PPPPP
Sbjct: 729 PAPPTPAPTPAVKHHPPPPP 748
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 786 PXXPNPPPPSXXPXPPXLPPPPPXPXPXXH 875
P PPPP +PPPP P H
Sbjct: 203 PGEHMPPPPMHHKPGEHMPPPPMHHEPGEH 232
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 786 PXXPNPPPPSXXPXPPXLPPPPPXPXPXXH 875
P PPPP +PPPP P H
Sbjct: 216 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEH 245
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 786 PXXPNPPPPSXXPXPPXLPPPPPXPXPXXH 875
P PPPP +PPPP P H
Sbjct: 229 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEH 258
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 786 PXXPNPPPPSXXPXPPXLPPPPPXPXPXXH 875
P PPPP +PPPP P H
Sbjct: 242 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEH 271
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 786 PXXPNPPPPSXXPXPPXLPPPPPXPXPXXH 875
P PPPP +PPPP P H
Sbjct: 255 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEH 284
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 786 PXXPNPPPPSXXPXPPXLPPPPPXPXPXXH 875
P PPPP +PPPP P H
Sbjct: 268 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEH 297
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 786 PXXPNPPPPSXXPXPPXLPPPPPXPXPXXH 875
P PPPP +PPPP P H
Sbjct: 281 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEH 310
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 786 PXXPNPPPPSXXPXPPXLPPPPPXPXPXXH 875
P PPPP +PPPP P H
Sbjct: 294 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEH 323
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/30 (36%), Positives = 12/30 (40%)
Frame = +3
Query: 786 PXXPNPPPPSXXPXPPXLPPPPPXPXPXXH 875
P PPPP +PPPP P H
Sbjct: 307 PGEHMPPPPMHHEPGEHMPPPPMHHEPGEH 336
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -2
Query: 161 TGPKNCDDYLHTLTPRNYFCTDK 93
TG KNCDD+L +P + D+
Sbjct: 402 TGNKNCDDHLRDKSPERRYRYDR 424
>SPAC1D4.11c |lkh1|kic1|dual specificity protein kinase
Lkh1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 690
Score = 26.6 bits (56), Expect = 4.8
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = +3
Query: 630 PTXXPPPLXPPXTXPQXPP 686
PT PPPL P P PP
Sbjct: 211 PTSYPPPLCPATYCPSNPP 229
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.2 bits (55), Expect = 6.4
Identities = 13/25 (52%), Positives = 13/25 (52%), Gaps = 1/25 (4%)
Frame = -3
Query: 865 GXGXGG-GGGSXGGXGXXEGGGGLG 794
G GG GGGS GG G GG G
Sbjct: 156 GNSRGGFGGGSRGGFGGGSRGGSRG 180
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 26.2 bits (55), Expect = 6.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +3
Query: 795 PNPPPPSXXPXPPXLPPPPPXP 860
P+ P + P +PPPPP P
Sbjct: 1080 PSAPVANNVSKPSAVPPPPPPP 1101
Score = 25.8 bits (54), Expect = 8.5
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 777 PXXPXXPNPPPPSXXPXPPXLPPPP 851
P P N PS P PP PPPP
Sbjct: 1080 PSAPVANNVSKPSAVPPPP--PPPP 1102
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,943,561
Number of Sequences: 5004
Number of extensions: 57519
Number of successful extensions: 556
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 181
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 393
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 458501510
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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