Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_L11
(835 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1465 + 33794225-33794389,33794471-33794597,33794669-337947... 31 0.86
06_01_0931 + 7192519-7194075 31 1.5
05_03_0366 - 13102147-13102281,13102560-13102739,13102791-131029... 31 1.5
06_01_0636 + 4627533-4628546 30 2.0
07_01_0370 + 2749353-2749786,2749949-2750346,2750435-2750519,275... 30 2.6
08_02_1438 + 27108359-27108889 29 3.5
06_03_0572 + 22388682-22389032 29 3.5
07_03_1148 - 24363952-24365086,24365178-24365361,24365438-243654... 29 4.6
03_01_0141 + 1116833-1117082,1117658-1118574,1119417-1119579,111... 29 4.6
09_04_0180 + 15367737-15367755,15368874-15369739 29 6.0
05_01_0499 - 4166891-4166942,4167191-4167510 29 6.0
10_08_1048 - 22553676-22554866 28 8.0
10_01_0271 - 2881059-2881409 28 8.0
07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166 28 8.0
>04_04_1465 +
33794225-33794389,33794471-33794597,33794669-33794799,
33795153-33795254,33795337-33795420,33795504-33795731,
33795934-33796038,33796376-33796731,33797146-33797303,
33797399-33797505,33797852-33798061
Length = 590
Score = 31.5 bits (68), Expect = 0.86
Identities = 18/36 (50%), Positives = 20/36 (55%), Gaps = 2/36 (5%)
Frame = -1
Query: 301 VAVVEVGGP--DGAEHVLVVAGERDLQGGPGGSVRV 200
VA V GGP DGA+ V+ V L G P GS RV
Sbjct: 91 VAYVTTGGPIPDGADAVVQVEDTEQLAGAPDGSKRV 126
>06_01_0931 + 7192519-7194075
Length = 518
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 1/92 (1%)
Frame = -1
Query: 619 LPPAE*SFRLMTSECAALNDAPTFCLNM*STPPPSVLKLGALGMALGEFLIANALALRSW 440
+PP + R CAAL +P S+ PPS A ++ +ALR+
Sbjct: 50 VPPGQTFERACIQACAALAFSPPAVAADLSSLPPS---------ASSPLVLVPNVALRTA 100
Query: 439 LLLW-NKLTLPATPSCSPKPGMRVPVRLSPCP 347
+L W ++L+LP SP V RL P P
Sbjct: 101 ILNWCDRLSLPYPAPLSPDTARDVVRRLMPSP 132
>05_03_0366 -
13102147-13102281,13102560-13102739,13102791-13102992,
13104385-13104575
Length = 235
Score = 30.7 bits (66), Expect = 1.5
Identities = 28/73 (38%), Positives = 34/73 (46%)
Frame = -1
Query: 415 LPATPSCSPKPGMRVPVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGER 236
LP +P + VP RL P PF LS +SP G + LVA A V AG
Sbjct: 5 LPHSPRAAAA-APSVPSRL-PRPFLLSLSSPSRGGSGLVA---------ASASAVAAGGS 53
Query: 235 DLQGGPGGSVRVH 197
+ GG GGS +H
Sbjct: 54 EGDGGIGGSHGLH 66
>06_01_0636 + 4627533-4628546
Length = 337
Score = 30.3 bits (65), Expect = 2.0
Identities = 23/72 (31%), Positives = 32/72 (44%)
Frame = -1
Query: 421 LTLPATPSCSPKPGMRVPVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAG 242
LTLP +P + VP+ L P T + A P GG+ +A P E + V
Sbjct: 12 LTLPMPQRDAPT-SLAVPLPLPPAATTTTSAPPAGGAMHPLASAGAAPPPPLEELERV-- 68
Query: 241 ERDLQGGPGGSV 206
R + G GG+V
Sbjct: 69 -RRVGSGAGGTV 79
>07_01_0370 +
2749353-2749786,2749949-2750346,2750435-2750519,
2751200-2751314,2751538-2751591
Length = 361
Score = 29.9 bits (64), Expect = 2.6
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 313 SAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGGSVRVHCEAAGLSP-RTCRH 158
+A L + V + G A V++ AG R GG GG V VH AA SP T RH
Sbjct: 3 AARLASTV-LAGRRRAASVVIAAGPR--YGGGGGGVHVHPWAAFPSPTATTRH 52
>08_02_1438 + 27108359-27108889
Length = 176
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/40 (42%), Positives = 21/40 (52%)
Frame = -1
Query: 319 GGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGGSVRV 200
GG E V VE DGA +L V E+++ GG VRV
Sbjct: 79 GGVREAVRCVEYVDDDGAVLLLTVTTEKEVAVVDGGEVRV 118
>06_03_0572 + 22388682-22389032
Length = 116
Score = 29.5 bits (63), Expect = 3.5
Identities = 26/59 (44%), Positives = 29/59 (49%), Gaps = 8/59 (13%)
Frame = -1
Query: 355 PCPFTLSRASPCGGSAEL---VAVVEVGGPDGAEH----VLVVAGERDLQGG-PGGSVR 203
P P L+ A GGS EL V V E GG DGA H + AGE + GG P G R
Sbjct: 3 PSPSILTDA---GGSPELGSGVKVAEDGGGDGAVHGEEDKAITAGEAEGAGGRPKGGAR 58
>07_03_1148 -
24363952-24365086,24365178-24365361,24365438-24365474,
24365585-24365818
Length = 529
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -1
Query: 331 ASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGGSV 206
A+PCGG E + +GG D V+++ GE L GPGG +
Sbjct: 452 AAPCGGRREEYHLSPLGG-DIRSQVVLLNGEA-LALGPGGEI 491
>03_01_0141 +
1116833-1117082,1117658-1118574,1119417-1119579,
1119668-1120497,1120562-1120570
Length = 722
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = -3
Query: 410 CDAELLPEAGNAGPGQAQPV 351
C A LLPE GN G GQ+ V
Sbjct: 486 CSATLLPEEGNTGDGQSPKV 505
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 28.7 bits (61), Expect = 6.0
Identities = 17/54 (31%), Positives = 21/54 (38%)
Frame = -1
Query: 412 PATPSCSPKPGMRVPVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLV 251
P TP P P P RL P F R SP G S A D + +++
Sbjct: 179 PPTPKPIPTPIPSPPPRLIPRSFLAKRLSPTGASDAATATKTTKAMDFVQTIVL 232
>05_01_0499 - 4166891-4166942,4167191-4167510
Length = 123
Score = 28.7 bits (61), Expect = 6.0
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -1
Query: 472 LIANALALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSPCPFTLSRASP 323
LI LALR LL N + PS SP+ + R P P + + ASP
Sbjct: 5 LIIVPLALRGASLLGNAVAAAVVPSSSPEQQQQQQRRPRPPPGSKNGASP 54
>10_08_1048 - 22553676-22554866
Length = 396
Score = 28.3 bits (60), Expect = 8.0
Identities = 18/60 (30%), Positives = 26/60 (43%)
Frame = -1
Query: 532 STPPPSVLKLGALGMALGEFLIANALALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSP 353
ST PP +L A E L+ A+R+ + N L P P P + + RL+P
Sbjct: 47 STAPPLLLPAAHQAQAQDEQLLRQLTAIRATVSQLNHLRSSTPPPPPPPPELLLYSRLAP 106
>10_01_0271 - 2881059-2881409
Length = 116
Score = 28.3 bits (60), Expect = 8.0
Identities = 21/60 (35%), Positives = 26/60 (43%)
Frame = -1
Query: 349 PFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGGSVRVHCEAAGLSPR 170
P L + C V+E G PD A VL A + GG GGS R +A +PR
Sbjct: 34 PQELHQHHACASWTTKTTVIETGPPDLAVAVLGTARCLAISGG-GGSPRRWLPSATTAPR 92
>07_01_0819 + 6606438-6607373,6608282-6608359,6608543-6609166
Length = 545
Score = 28.3 bits (60), Expect = 8.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 211 SVRVHCEAAGLSPRTCRHVST 149
S+R+HC A L+PR CR T
Sbjct: 401 SLRLHCPAPLLAPRKCRETCT 421
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,250,891
Number of Sequences: 37544
Number of extensions: 447608
Number of successful extensions: 1513
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1472
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1513
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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