Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_L11
(835 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y13582-1|CAA73909.1| 448|Homo sapiens TAP-associated protein, T... 34 0.73
BX248088-3|CAM25703.1| 504|Homo sapiens TAP binding protein (ta... 34 0.73
BX248088-2|CAI41784.1| 448|Homo sapiens TAP binding protein (ta... 34 0.73
BX248088-1|CAM25702.1| 466|Homo sapiens TAP binding protein (ta... 34 0.73
BC080574-1|AAH80574.1| 504|Homo sapiens TAPBP protein protein. 34 0.73
AL662827-10|CAM24888.1| 504|Homo sapiens TAP binding protein (t... 34 0.73
AL662827-9|CAI17523.1| 448|Homo sapiens TAP binding protein (ta... 34 0.73
AL662827-8|CAM24887.1| 466|Homo sapiens TAP binding protein (ta... 34 0.73
AL662820-10|CAM25472.1| 504|Homo sapiens TAP binding protein (t... 34 0.73
AL662820-9|CAI18120.1| 448|Homo sapiens TAP binding protein (ta... 34 0.73
AL662820-8|CAM25471.1| 466|Homo sapiens TAP binding protein (ta... 34 0.73
AF314222-1|AAG33061.1| 412|Homo sapiens tapasin protein. 34 0.73
AF029750-1|AAB82949.1| 448|Homo sapiens tapasin protein. 34 0.73
AF009510-1|AAC20076.1| 448|Homo sapiens tapasin protein. 34 0.73
AB010639-1|BAA28757.1| 448|Homo sapiens Tapasin*02 protein. 34 0.73
AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4) precu... 31 5.1
M64979-1|AAA58611.1| 376|Homo sapiens glial factor-1 protein. 31 6.8
L24544-1|AAA70430.1| 993|Homo sapiens DNA helicase protein. 31 6.8
L14754-1|AAA53082.1| 993|Homo sapiens DNA-binding protein protein. 31 6.8
BC105090-1|AAI05091.1| 993|Homo sapiens immunoglobulin mu bindi... 31 6.8
BC105088-1|AAI05089.1| 993|Homo sapiens immunoglobulin mu bindi... 31 6.8
BC025299-1|AAH25299.1| 868|Homo sapiens Unknown (protein for IM... 31 6.8
BC000290-1|AAH00290.1| 868|Homo sapiens IGHMBP2 protein protein. 31 6.8
AB208802-1|BAD92039.1| 629|Homo sapiens immunoglobulin mu bindi... 31 6.8
>Y13582-1|CAA73909.1| 448|Homo sapiens TAP-associated protein,
TAP-A protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.73
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>BX248088-3|CAM25703.1| 504|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 504
Score = 33.9 bits (74), Expect = 0.73
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>BX248088-2|CAI41784.1| 448|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.73
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>BX248088-1|CAM25702.1| 466|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 466
Score = 33.9 bits (74), Expect = 0.73
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 309 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 356
>BC080574-1|AAH80574.1| 504|Homo sapiens TAPBP protein protein.
Length = 504
Score = 33.9 bits (74), Expect = 0.73
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>AL662827-10|CAM24888.1| 504|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 504
Score = 33.9 bits (74), Expect = 0.73
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>AL662827-9|CAI17523.1| 448|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.73
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>AL662827-8|CAM24887.1| 466|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 466
Score = 33.9 bits (74), Expect = 0.73
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 309 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 356
>AL662820-10|CAM25472.1| 504|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 504
Score = 33.9 bits (74), Expect = 0.73
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>AL662820-9|CAI18120.1| 448|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.73
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>AL662820-8|CAM25471.1| 466|Homo sapiens TAP binding protein
(tapasin) protein.
Length = 466
Score = 33.9 bits (74), Expect = 0.73
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 309 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 356
>AF314222-1|AAG33061.1| 412|Homo sapiens tapasin protein.
Length = 412
Score = 33.9 bits (74), Expect = 0.73
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>AF029750-1|AAB82949.1| 448|Homo sapiens tapasin protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.73
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>AF009510-1|AAC20076.1| 448|Homo sapiens tapasin protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.73
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>AB010639-1|BAA28757.1| 448|Homo sapiens Tapasin*02 protein.
Length = 448
Score = 33.9 bits (74), Expect = 0.73
Identities = 21/53 (39%), Positives = 29/53 (54%)
Frame = -1
Query: 370 PVRLSPCPFTLSRASPCGGSAELVAVVEVGGPDGAEHVLVVAGERDLQGGPGG 212
P ++S P TL+RA+P EL+ +V P G V E +L+GGPGG
Sbjct: 291 PPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEV-----EWELRGGPGG 338
>AB209603-1|BAD92840.1| 337|Homo sapiens amyloid beta (A4)
precursor protein-binding, family A, member 3 variant
protein.
Length = 337
Score = 31.1 bits (67), Expect = 5.1
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = -1
Query: 454 ALRSWLLLWNKLTLPATPSCSPKPGMRVPVRLSPCPFTLS---RASPC 320
+LRS +W PA+ SCSP+P R R P S R+SPC
Sbjct: 248 SLRSMGRVWWPRHTPASSSCSPRPMARCISRRCQLPHIASLQARSSPC 295
>M64979-1|AAA58611.1| 376|Homo sapiens glial factor-1 protein.
Length = 376
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 404 AELLPEAGNAGPGQAQPVPVYVVQSE-PLRRQR 309
A L P AG GP QPVP Q+E P R QR
Sbjct: 301 AALGPPAGTGGPAPLQPVPPTPAQTEQPPREQR 333
>L24544-1|AAA70430.1| 993|Homo sapiens DNA helicase protein.
Length = 993
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 404 AELLPEAGNAGPGQAQPVPVYVVQSE-PLRRQR 309
A L P AG GP QPVP Q+E P R QR
Sbjct: 791 AALGPPAGTGGPAPLQPVPPTPAQTEQPPREQR 823
>L14754-1|AAA53082.1| 993|Homo sapiens DNA-binding protein protein.
Length = 993
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 404 AELLPEAGNAGPGQAQPVPVYVVQSE-PLRRQR 309
A L P AG GP QPVP Q+E P R QR
Sbjct: 791 AALGPPAGTGGPAPLQPVPPTPAQTEQPPREQR 823
>BC105090-1|AAI05091.1| 993|Homo sapiens immunoglobulin mu binding
protein 2 protein.
Length = 993
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 404 AELLPEAGNAGPGQAQPVPVYVVQSE-PLRRQR 309
A L P AG GP QPVP Q+E P R QR
Sbjct: 791 AALGPPAGTGGPAPLQPVPPTPAQTEQPPREQR 823
>BC105088-1|AAI05089.1| 993|Homo sapiens immunoglobulin mu binding
protein 2 protein.
Length = 993
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 404 AELLPEAGNAGPGQAQPVPVYVVQSE-PLRRQR 309
A L P AG GP QPVP Q+E P R QR
Sbjct: 791 AALGPPAGTGGPAPLQPVPPTPAQTEQPPREQR 823
>BC025299-1|AAH25299.1| 868|Homo sapiens Unknown (protein for
IMAGE:4890919) protein.
Length = 868
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 404 AELLPEAGNAGPGQAQPVPVYVVQSE-PLRRQR 309
A L P AG GP QPVP Q+E P R QR
Sbjct: 791 AALGPPAGTGGPAPLQPVPPTPAQTEQPPREQR 823
>BC000290-1|AAH00290.1| 868|Homo sapiens IGHMBP2 protein protein.
Length = 868
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 404 AELLPEAGNAGPGQAQPVPVYVVQSE-PLRRQR 309
A L P AG GP QPVP Q+E P R QR
Sbjct: 791 AALGPPAGTGGPAPLQPVPPTPAQTEQPPREQR 823
>AB208802-1|BAD92039.1| 629|Homo sapiens immunoglobulin mu binding
protein 2 variant protein.
Length = 629
Score = 30.7 bits (66), Expect = 6.8
Identities = 17/33 (51%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Frame = -3
Query: 404 AELLPEAGNAGPGQAQPVPVYVVQSE-PLRRQR 309
A L P AG GP QPVP Q+E P R QR
Sbjct: 427 AALGPPAGTGGPAPLQPVPPTPAQTEQPPREQR 459
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,169,894
Number of Sequences: 237096
Number of extensions: 2237764
Number of successful extensions: 20671
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 20197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20669
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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