Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_L06
         (916 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.         31   5.8  
AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.        31   5.8  
AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.     31   5.8  

>AY494951-1|AAS82582.1| 1250|Homo sapiens lamellipodin protein.
          Length = 1250

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +2

Query: 821 PDPXXLXPGTLSXPXKSTPPXNTPXXXPPXPP 916
           P P  + P T S P    PP   P   PP PP
Sbjct: 611 PQPKIVTPYTASQPSPPLPPPPPPPPPPPPPP 642


>AJ584699-1|CAE48361.1| 1250|Homo sapiens RAPH1 protein protein.
          Length = 1250

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +2

Query: 821 PDPXXLXPGTLSXPXKSTPPXNTPXXXPPXPP 916
           P P  + P T S P    PP   P   PP PP
Sbjct: 611 PQPKIVTPYTASQPSPPLPPPPPPPPPPPPPP 642


>AB051468-1|BAB21772.1| 1236|Homo sapiens KIAA1681 protein protein.
          Length = 1236

 Score = 31.1 bits (67), Expect = 5.8
 Identities = 13/32 (40%), Positives = 14/32 (43%)
 Frame = +2

Query: 821 PDPXXLXPGTLSXPXKSTPPXNTPXXXPPXPP 916
           P P  + P T S P    PP   P   PP PP
Sbjct: 597 PQPKIVTPYTASQPSPPLPPPPPPPPPPPPPP 628


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,358,316
Number of Sequences: 237096
Number of extensions: 2069969
Number of successful extensions: 7056
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5822
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6818
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11881370308
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)