Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_L04
         (853 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    23   2.7  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   3.6  
AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex det...    23   4.7  
AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex det...    23   4.7  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    22   6.2  

>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -3

Query: 167 SHNYKNLVIFIYY 129
           SH YKN +I +YY
Sbjct: 65  SHQYKNPIIVMYY 77


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 23.0 bits (47), Expect = 3.6
 Identities = 16/57 (28%), Positives = 27/57 (47%)
 Frame = +2

Query: 260 SISDAYKILVVFPMPGKSHSILGYSVVKHLLKAGHEVTYVTPFVEDNHHPKLTQVDV 430
           +I DA K      +  KS S+  YS+ KH LK      ++  +V+      + +VD+
Sbjct: 565 TIEDADKNQCRHYLDAKS-SVQNYSLAKHQLKEAFVKAHLGSWVKKPIEQDMFEVDI 620


>AY350618-1|AAQ57660.1|  425|Apis mellifera complementary sex
           determiner protein.
          Length = 425

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 7/29 (24%), Positives = 17/29 (58%)
 Frame = -3

Query: 206 SDHKHNTTTKKHYSHNYKNLVIFIYYKVD 120
           +++ +N     +Y++NY N    +YY ++
Sbjct: 328 NNYNNNYNNYNNYNNNYNNNYKKLYYNIN 356


>AY350617-1|AAQ57659.1|  428|Apis mellifera complementary sex
           determiner protein.
          Length = 428

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 7/27 (25%), Positives = 15/27 (55%)
 Frame = -3

Query: 203 DHKHNTTTKKHYSHNYKNLVIFIYYKV 123
           ++ +N     +Y++NY N    +YY +
Sbjct: 332 NYNNNNYNNNNYNNNYNNNCKKLYYNI 358


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 7/27 (25%), Positives = 16/27 (59%)
 Frame = -3

Query: 200 HKHNTTTKKHYSHNYKNLVIFIYYKVD 120
           + +N +   +Y++NY N    +YY ++
Sbjct: 87  NNYNYSNYNNYNNNYNNYNKKLYYNIN 113


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 241,231
Number of Sequences: 438
Number of extensions: 4994
Number of successful extensions: 30
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)