Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP11_F_L01
         (861 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    25   1.0  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    22   5.4  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   5.4  
AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH trans...    22   5.4  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    21   9.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   9.5  

>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 24.6 bits (51), Expect = 1.0
 Identities = 14/48 (29%), Positives = 25/48 (52%)
 Frame = +1

Query: 355 RXALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 498
           R  LGD + K   +  Q+ + +ER  +E  + +P V   + AL E ++
Sbjct: 27  RDVLGDIHAKPTYSDLQNLKYLERCIKESLRLYPSVHLISRALGEDVR 74


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 10/26 (38%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
 Frame = +2

Query: 131 SLRLHRSGPRSDGATRRS-RLLQGHR 205
           ++RL R+GPR++ A     R++  HR
Sbjct: 179 NIRLKRAGPRTESAVYEPVRIMGVHR 204


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = -2

Query: 497 CSFSRRAVAFFSTSGWALRSSSAVRSMFCLDCSK 396
           C    ++ A  ST    LR+ S  +   C+DC+K
Sbjct: 252 CRICGKSYARPSTLKTHLRTHSGEKPYRCIDCNK 285


>AJ829922-1|CAH25640.1|  193|Tribolium castaneum twist bHLH
           transcription factor protein.
          Length = 193

 Score = 22.2 bits (45), Expect = 5.4
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = +3

Query: 171 RRDAPDFFKDIEH 209
           RR AP  F+DI+H
Sbjct: 84  RRKAPQSFEDIQH 96


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 13/33 (39%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
 Frame = +3

Query: 177 DAPDFFKDIEHHTKAVP*DFSNNSL---TRSPS 266
           D P  FK+IE H  A+    +N++L    +SPS
Sbjct: 37  DTPLSFKNIESHLNAIS-QITNSTLDPGRKSPS 68


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -3

Query: 442  GAPRPCARCSASTVPKPPWPCRSRLRAL 359
            G P+P + CS +     P  C   L  L
Sbjct: 1271 GGPQPYSACSENAFAAYPGDCTRYLHCL 1298


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 80  RCEPDCNTEEC 48
           RC+ +CNT  C
Sbjct: 501 RCDEECNTYAC 511



 Score = 21.4 bits (43), Expect = 9.5
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = -2

Query: 77  CEPDCNTEECV 45
           C  DCN  EC+
Sbjct: 543 CNEDCNNPECL 553


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 122,369
Number of Sequences: 336
Number of extensions: 1916
Number of successful extensions: 12
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23866870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)