Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP11_F_L01
(861 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665 34 0.13
01_01_0561 + 4122751-4123140,4124226-4124484,4124639-4124985 32 0.51
02_01_0075 - 522554-522616,522742-522748,523033-523136,523237-52... 31 1.2
04_01_0180 + 2034021-2034023,2034741-2035088 30 2.1
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.1
07_03_0441 + 18256103-18258076 30 2.7
04_04_1657 - 35102751-35102868,35102987-35103504,35104065-351042... 29 3.6
03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401 28 8.3
02_02_0331 + 9017291-9019084,9019205-9019402,9020014-9020184,902... 28 8.3
>02_05_0471 - 29306334-29306398,29306579-29306775,29307744-29309665
Length = 727
Score = 34.3 bits (75), Expect = 0.13
Identities = 25/83 (30%), Positives = 36/83 (43%)
Frame = +1
Query: 370 DANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAAVXNTVQESXKLXXKV 549
DA G+ EA+E + E+L A+PDV+ L E L+ A +++ L
Sbjct: 637 DAMGRLDEAIEILEHVVGMREEKLGTANPDVDDEKRRLAELLKEAGRGRSRKAKSL---- 692
Query: 550 SSNVXETNXKLAPXIXAXYDXFP 618
N+ ETN A YD P
Sbjct: 693 -ENLLETNPYTVTKRVAKYDSLP 714
>01_01_0561 + 4122751-4123140,4124226-4124484,4124639-4124985
Length = 331
Score = 32.3 bits (70), Expect = 0.51
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +1
Query: 325 NSSTPSPRVSRXALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAA 504
+ P+P S+ + N KAKEA ++S++ + T EE A PD + + ++E+L+
Sbjct: 227 DGDAPAPSESKSSKKKKNKKAKEA-KESQEPADGT-EETASAEPDEDTTSVDVKERLKKM 284
Query: 505 VXNTVQESXK 534
++S K
Sbjct: 285 ASMKKKKSGK 294
>02_01_0075 -
522554-522616,522742-522748,523033-523136,523237-523368,
525209-525401,525978-526330,526693-526791,526864-526935,
527062-527213,527338-527386,527755-527885,528067-528307,
528392-528565,528656-528797,529236-529282,529370-529450,
530170-530271,530345-530440,531437-531444,531575-531616,
531830-531894,534761-534853,534888-534959,535303-535509,
536318-537226,537503-538158
Length = 1429
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/48 (35%), Positives = 27/48 (56%)
Frame = +1
Query: 361 ALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQAA 504
A+ DA G+ ++A+E ++ E+L A+PDVE L E L+ A
Sbjct: 515 AIYDAMGRVEDAIEILEHVLKVREEKLGTANPDVEDEKLRLAELLKEA 562
>04_01_0180 + 2034021-2034023,2034741-2035088
Length = 116
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/34 (41%), Positives = 20/34 (58%)
Frame = +1
Query: 391 EALEQSRQNIERTAEELRKAHPDVEKNATALREK 492
EALE+ QN+ R EE +K H +++K L K
Sbjct: 52 EALERQVQNLTRYKEEKQKQHANLQKEFAELERK 85
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/40 (35%), Positives = 14/40 (35%)
Frame = +3
Query: 738 PPXXPXPPXXXXXXPLXXXXXXPSPXPXXXXXXTXGPPPP 857
PP P PP P PSP P G PPP
Sbjct: 340 PPKGPPPPPPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPP 379
>07_03_0441 + 18256103-18258076
Length = 657
Score = 29.9 bits (64), Expect = 2.7
Identities = 21/52 (40%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
Frame = -3
Query: 436 PRPCARCSASTVPKP-PWPCR---SRLRALPWRLLAKALSCCSTXLGAVLPS 293
PRP A SAS+ P P PW R LR+ P L A + C+T L + P+
Sbjct: 42 PRPYAASSASSSPTPSPWLARVVSLILRSPPATLAADLRAFCATFLLRLSPA 93
>04_04_1657 -
35102751-35102868,35102987-35103504,35104065-35104211,
35104289-35106262,35106964-35107089,35107178-35107264,
35107335-35107424,35107725-35107811,35108248-35108300,
35109339-35109387
Length = 1082
Score = 29.5 bits (63), Expect = 3.6
Identities = 16/66 (24%), Positives = 31/66 (46%)
Frame = +1
Query: 307 LRXPCCNSSTPSPRVSRXALGDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALR 486
LR P NSS+ S L DAN K+ +++ ++ + ++ + D++K+
Sbjct: 786 LRLPNLNSSSSLSSESFDILRDANELLKQEVQKLKEEVNSLRQQREQQDADLQKSEAKAH 845
Query: 487 EKLQAA 504
E + A
Sbjct: 846 EAMTLA 851
>03_05_0512 + 25069175-25070533,25072177-25072226,25072308-25072401
Length = 500
Score = 28.3 bits (60), Expect = 8.3
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +1
Query: 367 GDANGKAKEALEQSRQNIERTAEELRKAHPDVEKNATALREKLQ 498
GD G+ + A+ +R E A LR+A ++ A ALR +++
Sbjct: 47 GDGEGEGEGAVVLARVEAEEEAAALREAVAAAQETAAALRSEVE 90
>02_02_0331 +
9017291-9019084,9019205-9019402,9020014-9020184,
9020292-9020435,9020552-9020764,9020859-9021929,
9022365-9022391
Length = 1205
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +1
Query: 388 KEALEQSRQNIERTAEELR-KAHPDVEKNATALREKLQAAVXNTVQE 525
K+ +QS ERT E + KAH ++ K E +QAA +QE
Sbjct: 416 KQDAKQSDPKKERTVSEAKEKAHDEMNKGRAYGNETVQAASVKQMQE 462
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,259,444
Number of Sequences: 37544
Number of extensions: 293792
Number of successful extensions: 1350
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1184
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1336
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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